RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.27□□□□□ -0.93
SP140-202ENST00000373645 TEX11Q8IYF3 940 aa9.27□□□□□ -0.93
SP140-202ENST00000373645 RASEFQ8IZ41 740 aa9.27□□□□□ -0.93
SP140-202ENST00000373645 USP6NLQ92738 828 aa9.27□□□□□ -0.93
SP140-202ENST00000373645 PAGR1Q9BTK6 254 aa9.27□□□□□ -0.93
SP140-202ENST00000373645 SNRKQ9NRH2 765 aa9.27□□□□□ -0.93
SP140-202ENST00000373645 PAG1Q9NWQ8 432 aa9.27□□□□□ -0.93
SP140-202ENST00000373645 FLRT1Q9NZU1 646 aa9.27□□□□□ -0.93
SP140-202ENST00000373645 RBPJLQ9UBG7 517 aa9.27□□□□□ -0.93
SP140-202ENST00000373645 PCDHB13Q9Y5F0 798 aa9.27□□□□□ -0.93
SP140-202ENST00000373645 MYO5AQ9Y4I1 1855 aaKnown RBP9.26□□□□□ -0.93
SP140-202ENST00000373645 GOLIM4O00461 696 aa9.26□□□□□ -0.93
SP140-202ENST00000373645 CYP2E1P05181 493 aaPredicted RBP9.26□□□□□ -0.93
SP140-202ENST00000373645 BACE1P56817 501 aa9.26□□□□□ -0.93
SP140-202ENST00000373645 ERVK-9P63128 1117 aa9.26□□□□□ -0.93
SP140-202ENST00000373645 ERVK-24P63145 666 aa9.26□□□□□ -0.93
SP140-202ENST00000373645 SPTY2D1Q68D10 685 aaPredicted RBP9.26□□□□□ -0.93
SP140-202ENST00000373645 GPR142Q7Z601 462 aa9.26□□□□□ -0.93
SP140-202ENST00000373645 MAPKAPK5Q8IW41 473 aa9.26□□□□□ -0.93
SP140-202ENST00000373645 SLF2Q8IX21 1173 aa9.26□□□□□ -0.93
SP140-202ENST00000373645 KBTBD3Q8NAB2 608 aa9.26□□□□□ -0.93
SP140-202ENST00000373645 SOCS4Q8WXH5 440 aa9.26□□□□□ -0.93
SP140-202ENST00000373645 EDC3Q96F86 508 aaKnown RBP9.26□□□□□ -0.93
SP140-202ENST00000373645 APBA2Q99767 749 aa9.26□□□□□ -0.93
SP140-202ENST00000373645 NUDT12Q9BQG2 462 aa9.26□□□□□ -0.93
SP140-202ENST00000373645 ANTXR1Q9H6X2 564 aa9.26□□□□□ -0.93
SP140-202ENST00000373645 AATFQ9NY61 560 aaKnown RBP eCLIP9.26□□□□□ -0.93
SP140-202ENST00000373645 RAI14Q9P0K7 980 aa9.26□□□□□ -0.93
SP140-202ENST00000373645 TTC28Q96AY4 2481 aa9.26□□□□□ -0.93
SP140-202ENST00000373645 LTBP2Q14767 1821 aa9.26□□□□□ -0.93
SP140-202ENST00000373645 DNAH12Q6ZR08 3092 aa9.25□□□□□ -0.93
SP140-202ENST00000373645 HIP1O00291 1037 aa9.25□□□□□ -0.93
SP140-202ENST00000373645 IGSF3O75054 1194 aa9.25□□□□□ -0.93
SP140-202ENST00000373645 CDC45O75419 566 aa9.25□□□□□ -0.93
SP140-202ENST00000373645 CNMDO75829 334 aa9.25□□□□□ -0.93
SP140-202ENST00000373645 XRCC5P13010 732 aaKnown RBP9.25□□□□□ -0.93
SP140-202ENST00000373645 CAPN2P17655 700 aa9.25□□□□□ -0.93
SP140-202ENST00000373645 HOXA7P31268 230 aaPredicted RBP9.25□□□□□ -0.93
SP140-202ENST00000373645 PABPC4Q13310 644 aaKnown RBP eCLIP9.25□□□□□ -0.93
SP140-202ENST00000373645 ZYXQ15942 572 aaKnown RBP9.25□□□□□ -0.93
SP140-202ENST00000373645 LRRFIP1Q32MZ4 808 aaKnown RBP9.25□□□□□ -0.93
SP140-202ENST00000373645 CASC1Q6TDU7 716 aa9.25□□□□□ -0.93
SP140-202ENST00000373645 GPRC5AQ8NFJ5 357 aa9.25□□□□□ -0.93
SP140-202ENST00000373645 MARVELD3Q96A59 401 aa9.25□□□□□ -0.93
SP140-202ENST00000373645 FSD1Q9BTV5 496 aa9.25□□□□□ -0.93
SP140-202ENST00000373645 WDR18Q9BV38 432 aa9.25□□□□□ -0.93
SP140-202ENST00000373645 EMILIN3Q9NT22 766 aa9.25□□□□□ -0.93
SP140-202ENST00000373645 SAP30BPQ9UHR5 308 aaKnown RBP9.25□□□□□ -0.93
SP140-202ENST00000373645 PALD1Q9ULE6 856 aa9.25□□□□□ -0.93
SP140-202ENST00000373645 ZBTB21Q9ULJ3 1066 aa9.25□□□□□ -0.93
SP140-202ENST00000373645 FLT1P17948 1338 aa9.25□□□□□ -0.93
SP140-202ENST00000373645 FOCADQ5VW36 1801 aa9.24□□□□□ -0.93
SP140-202ENST00000373645 ZFYP08048 801 aaPredicted RBP9.24□□□□□ -0.93
SP140-202ENST00000373645 CHMLP26374 656 aa9.24□□□□□ -0.93
SP140-202ENST00000373645 RGS2P41220 211 aa9.24□□□□□ -0.93
SP140-202ENST00000373645 ZSCAN25Q6NSZ9 544 aa9.24□□□□□ -0.93
SP140-202ENST00000373645 TRPV1Q8NER1 839 aa9.24□□□□□ -0.93
SP140-202ENST00000373645 TGFBRAP1Q8WUH2 860 aa9.24□□□□□ -0.93
SP140-202ENST00000373645 SENP6Q9GZR1 1112 aaPredicted RBP9.24□□□□□ -0.93
SP140-202ENST00000373645 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.24□□□□□ -0.93
SP140-202ENST00000373645 AS3MTQ9HBK9 375 aa9.24□□□□□ -0.93
SP140-202ENST00000373645 PIH1D3Q9NQM4 214 aaKnown RBP9.24□□□□□ -0.93
SP140-202ENST00000373645 TMOD4Q9NZQ9 345 aa9.24□□□□□ -0.93
SP140-202ENST00000373645 LRP2BPQ9P2M1 347 aa9.24□□□□□ -0.93
SP140-202ENST00000373645 HERC5Q9UII4 1024 aaKnown RBP9.24□□□□□ -0.93
SP140-202ENST00000373645 USP17L10C9JJH3 530 aa9.23□□□□□ -0.93
SP140-202ENST00000373645 RNF113AO15541 343 aaKnown RBP9.23□□□□□ -0.93
SP140-202ENST00000373645 IDH1O75874 414 aaKnown RBP9.23□□□□□ -0.93
SP140-202ENST00000373645 ASNSP08243 561 aa9.23□□□□□ -0.93
SP140-202ENST00000373645 MAPK4P31152 587 aa9.23□□□□□ -0.93
SP140-202ENST00000373645 CYP2C19P33261 490 aa9.23□□□□□ -0.93
SP140-202ENST00000373645 MAP3K12Q12852 859 aa9.23□□□□□ -0.93
SP140-202ENST00000373645 C8orf34Q49A92 452 aa9.23□□□□□ -0.93
SP140-202ENST00000373645 C9orf50Q5SZB4 431 aa9.23□□□□□ -0.93
SP140-202ENST00000373645 ANO1Q5XXA6 986 aa9.23□□□□□ -0.93
SP140-202ENST00000373645 PLEKHH3Q7Z736 793 aa9.23□□□□□ -0.93
SP140-202ENST00000373645 NPLOC4Q8TAT6 608 aa9.23□□□□□ -0.93
SP140-202ENST00000373645 RUFY2Q8WXA3 655 aa9.23□□□□□ -0.93
SP140-202ENST00000373645 TBC1D2Q9BYX2 928 aa9.23□□□□□ -0.93
SP140-202ENST00000373645 DIAPH3Q9NSV4 1193 aa9.23□□□□□ -0.93
SP140-202ENST00000373645 PI4KBQ9UBF8 816 aa9.23□□□□□ -0.93
SP140-202ENST00000373645 EIF5BO60841 1220 aaKnown RBP9.22□□□□□ -0.93
SP140-202ENST00000373645 GH2P01242 217 aa9.22□□□□□ -0.93
SP140-202ENST00000373645 LDHCP07864 332 aa9.22□□□□□ -0.93
SP140-202ENST00000373645 ADD2P35612 726 aa9.22□□□□□ -0.93
SP140-202ENST00000373645 RTP1P59025 263 aa9.22□□□□□ -0.93
SP140-202ENST00000373645 DYNLL1P63167 89 aaKnown RBP9.22□□□□□ -0.93
SP140-202ENST00000373645 GSTO1P78417 241 aa9.22□□□□□ -0.93
SP140-202ENST00000373645 MAP2K5Q13163 448 aa9.22□□□□□ -0.93
SP140-202ENST00000373645 SHHQ15465 462 aa9.22□□□□□ -0.93
SP140-202ENST00000373645 SLC9C2Q5TAH2 1124 aa9.22□□□□□ -0.93
SP140-202ENST00000373645 WDR78Q5VTH9 848 aa9.22□□□□□ -0.93
SP140-202ENST00000373645 NAA16Q6N069 864 aaPredicted RBP9.22□□□□□ -0.93
SP140-202ENST00000373645 TMED8Q6PL24 325 aaPredicted RBP9.22□□□□□ -0.93
SP140-202ENST00000373645 METTL16Q86W50 562 aaKnown RBP9.22□□□□□ -0.93
SP140-202ENST00000373645 CDX2Q99626 313 aaPredicted RBP9.22□□□□□ -0.93
SP140-202ENST00000373645 BTBD7Q9P203 1132 aa9.22□□□□□ -0.93
SP140-202ENST00000373645 RLFQ13129 1914 aa9.22□□□□□ -0.93
SP140-202ENST00000373645 SPTBN5Q9NRC6 3674 aaKnown RBP9.22□□□□□ -0.93
SP140-202ENST00000373645 C19orf81C9J6K1 198 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms