RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 NEDD1Q8NHV4 660 aa14.25□□□□□ -0.13
HDAC8-201ENST00000373554 TANGO6Q9C0B7 1094 aa14.25□□□□□ -0.13
HDAC8-201ENST00000373554 ARHGAP39Q9C0H5 1083 aa14.25□□□□□ -0.13
HDAC8-201ENST00000373554 NYAP2Q9P242 653 aa14.25□□□□□ -0.13
HDAC8-201ENST00000373554 CTNNA3Q9UI47 895 aa14.25□□□□□ -0.13
HDAC8-201ENST00000373554 IGKV6D-41A0A0C4DH26 115 aa14.24□□□□□ -0.13
HDAC8-201ENST00000373554 ZNF213O14771 459 aa14.24□□□□□ -0.13
HDAC8-201ENST00000373554 WDR46O15213 610 aaKnown RBP14.24□□□□□ -0.13
HDAC8-201ENST00000373554 ORC4O43929 436 aa14.24□□□□□ -0.13
HDAC8-201ENST00000373554 RAD21O60216 631 aa14.24□□□□□ -0.13
HDAC8-201ENST00000373554 RANBP6O60518 1105 aaKnown RBP14.24□□□□□ -0.13
HDAC8-201ENST00000373554 HOXD10P28358 340 aa14.24□□□□□ -0.13
HDAC8-201ENST00000373554 BMP2KLQ5H9B9 411 aa14.24□□□□□ -0.13
HDAC8-201ENST00000373554 FAM47AQ5JRC9 791 aa14.24□□□□□ -0.13
HDAC8-201ENST00000373554 PPP4R3BQ5MIZ7 849 aa14.24□□□□□ -0.13
HDAC8-201ENST00000373554 CATSPERGQ6ZRH7 1159 aa14.24□□□□□ -0.13
HDAC8-201ENST00000373554 SKAP1Q86WV1 359 aa14.24□□□□□ -0.13
HDAC8-201ENST00000373554 SPICE1Q8N0Z3 855 aa14.24□□□□□ -0.13
HDAC8-201ENST00000373554 CEP95Q96GE4 821 aa14.24□□□□□ -0.13
HDAC8-201ENST00000373554 P2RX7Q99572 595 aaKnown RBP14.24□□□□□ -0.13
HDAC8-201ENST00000373554 IL25Q9H293 177 aa14.24□□□□□ -0.13
HDAC8-201ENST00000373554 RNF41Q9H4P4 317 aaPredicted RBP14.24□□□□□ -0.13
HDAC8-201ENST00000373554 MTMR4Q9NYA4 1195 aa14.24□□□□□ -0.13
HDAC8-201ENST00000373554 PTPN22Q9Y2R2 807 aa14.24□□□□□ -0.13
HDAC8-201ENST00000373554 LAMA4Q16363 1823 aa14.24□□□□□ -0.13
HDAC8-201ENST00000373554 ZSWIM8A7E2V4 1837 aa14.23□□□□□ -0.13
HDAC8-201ENST00000373554 TNPO2O14787 897 aaKnown RBP14.23□□□□□ -0.13
HDAC8-201ENST00000373554 TTLL1O95922 423 aa14.23□□□□□ -0.13
HDAC8-201ENST00000373554 PRMT2P55345 433 aa14.23□□□□□ -0.13
HDAC8-201ENST00000373554 CAP1Q01518 475 aa14.23□□□□□ -0.13
HDAC8-201ENST00000373554 IMMTQ16891 758 aaKnown RBP14.23□□□□□ -0.13
HDAC8-201ENST00000373554 RRP12Q5JTH9 1297 aaKnown RBP14.23□□□□□ -0.13
HDAC8-201ENST00000373554 AKNAD1Q5T1N1 836 aa14.23□□□□□ -0.13
HDAC8-201ENST00000373554 MFSD6Q6ZSS7 791 aa14.23□□□□□ -0.13
HDAC8-201ENST00000373554 TRIM47Q96LD4 638 aa14.23□□□□□ -0.13
HDAC8-201ENST00000373554 PAGR1Q9BTK6 254 aa14.23□□□□□ -0.13
HDAC8-201ENST00000373554 PPP4R2Q9NY27 417 aa14.23□□□□□ -0.13
HDAC8-201ENST00000373554 MORF4L1Q9UBU8 362 aa14.23□□□□□ -0.13
HDAC8-201ENST00000373554 CLIP2Q9UDT6 1046 aa14.23□□□□□ -0.13
HDAC8-201ENST00000373554 SYNPO2Q9UMS6 1093 aa14.23□□□□□ -0.13
HDAC8-201ENST00000373554 HPS5Q9UPZ3 1129 aa14.23□□□□□ -0.13
HDAC8-201ENST00000373554 SGSM2O43147 1006 aa14.22□□□□□ -0.13
HDAC8-201ENST00000373554 FGRP09769 529 aa14.22□□□□□ -0.13
HDAC8-201ENST00000373554 KIAA1755Q5JYT7 1200 aa14.22□□□□□ -0.13
HDAC8-201ENST00000373554 TBC1D10CQ8IV04 446 aa14.22□□□□□ -0.13
HDAC8-201ENST00000373554 GPRC5AQ8NFJ5 357 aa14.22□□□□□ -0.13
HDAC8-201ENST00000373554 STAG1Q8WVM7 1258 aa14.22□□□□□ -0.13
HDAC8-201ENST00000373554 INCENPQ9NQS7 918 aa14.22□□□□□ -0.13
HDAC8-201ENST00000373554 MYPNQ86TC9 1320 aa14.21□□□□□ -0.13
HDAC8-201ENST00000373554 CCDC85CA6NKD9 419 aa14.21□□□□□ -0.13
HDAC8-201ENST00000373554 FLOT1O75955 427 aa14.21□□□□□ -0.13
HDAC8-201ENST00000373554 CTGFP29279 349 aa14.21□□□□□ -0.13
HDAC8-201ENST00000373554 NT5C2P49902 561 aa14.21□□□□□ -0.13
HDAC8-201ENST00000373554 COG2Q14746 738 aa14.21□□□□□ -0.13
HDAC8-201ENST00000373554 LBX2Q6XYB7 198 aa14.21□□□□□ -0.13
HDAC8-201ENST00000373554 CCAR1Q8IX12 1150 aaKnown RBP14.21□□□□□ -0.13
HDAC8-201ENST00000373554 PIAS4Q8N2W9 510 aaPredicted RBP14.21□□□□□ -0.13
HDAC8-201ENST00000373554 COA7Q96BR5 231 aa14.21□□□□□ -0.13
HDAC8-201ENST00000373554 NBPF3Q9H094 633 aa14.21□□□□□ -0.13
HDAC8-201ENST00000373554 TXNRD2Q9NNW7 524 aa14.21□□□□□ -0.13
HDAC8-201ENST00000373554 HOXC10Q9NYD6 342 aa14.21□□□□□ -0.13
HDAC8-201ENST00000373554 SRRDQ9UH36 339 aa14.21□□□□□ -0.13
HDAC8-201ENST00000373554 STX8Q9UNK0 236 aa14.21□□□□□ -0.13
HDAC8-201ENST00000373554 RABGAP1Q9Y3P9 1069 aa14.21□□□□□ -0.13
HDAC8-201ENST00000373554 SPDYE16A6NNV3 312 aaPredicted RBP14.2□□□□□ -0.14
HDAC8-201ENST00000373554 F5H6K3 240 aa14.2□□□□□ -0.14
HDAC8-201ENST00000373554 NDUFB10O96000 172 aa14.2□□□□□ -0.14
HDAC8-201ENST00000373554 ERVK-9P63128 1117 aa14.2□□□□□ -0.14
HDAC8-201ENST00000373554 ERVK-24P63145 666 aa14.2□□□□□ -0.14
HDAC8-201ENST00000373554 CCNA1P78396 465 aa14.2□□□□□ -0.14
HDAC8-201ENST00000373554 KLRC3Q07444 240 aa14.2□□□□□ -0.14
HDAC8-201ENST00000373554 CASC1Q6TDU7 716 aa14.2□□□□□ -0.14
HDAC8-201ENST00000373554 KIAA1211Q6ZU35 1233 aa14.2□□□□□ -0.14
HDAC8-201ENST00000373554 LRRC47Q8N1G4 583 aaKnown RBP14.2□□□□□ -0.14
HDAC8-201ENST00000373554 ESR2Q92731 530 aa14.2□□□□□ -0.14
HDAC8-201ENST00000373554 MKL1Q969V6 931 aa14.2□□□□□ -0.14
HDAC8-201ENST00000373554 RBPJLQ9UBG7 517 aa14.2□□□□□ -0.14
HDAC8-201ENST00000373554 TACC3Q9Y6A5 838 aa14.2□□□□□ -0.14
HDAC8-201ENST00000373554 PTCH2Q9Y6C5 1203 aa14.2□□□□□ -0.14
HDAC8-201ENST00000373554 MYH4Q9Y623 1939 aa14.19□□□□□ -0.14
HDAC8-201ENST00000373554 NEDD4P46934 1319 aa14.19□□□□□ -0.14
HDAC8-201ENST00000373554 MGAMO43451 1857 aa14.19□□□□□ -0.14
HDAC8-201ENST00000373554 PRKCZQ05513 592 aa14.19□□□□□ -0.14
HDAC8-201ENST00000373554 SLC9C1Q4G0N8 1177 aa14.19□□□□□ -0.14
HDAC8-201ENST00000373554 FAM83BQ5T0W9 1011 aa14.19□□□□□ -0.14
HDAC8-201ENST00000373554 SAMD1Q6SPF0 538 aaPredicted RBP14.19□□□□□ -0.14
HDAC8-201ENST00000373554 MB21D1Q8N884 522 aa14.19□□□□□ -0.14
HDAC8-201ENST00000373554 GMCL1P1Q8NEA9 526 aa14.19□□□□□ -0.14
HDAC8-201ENST00000373554 RAET1EQ8TD07 263 aa14.19□□□□□ -0.14
HDAC8-201ENST00000373554 CWC22Q9HCG8 908 aaKnown RBP14.19□□□□□ -0.14
HDAC8-201ENST00000373554 U3KPZ7 1027 aaPredicted RBP14.19□□□□□ -0.14
HDAC8-201ENST00000373554 A0A0G2JMZ2 1700 aa14.18□□□□□ -0.14
HDAC8-201ENST00000373554 NMT2O60551 498 aa14.18□□□□□ -0.14
HDAC8-201ENST00000373554 PEX10O60683 326 aa14.18□□□□□ -0.14
HDAC8-201ENST00000373554 CDC45O75419 566 aa14.18□□□□□ -0.14
HDAC8-201ENST00000373554 MAPK4P31152 587 aa14.18□□□□□ -0.14
HDAC8-201ENST00000373554 DSG3P32926 999 aa14.18□□□□□ -0.14
HDAC8-201ENST00000373554 RGS19P49795 217 aa14.18□□□□□ -0.14
HDAC8-201ENST00000373554 PTH1RQ03431 593 aa14.18□□□□□ -0.14
HDAC8-201ENST00000373554 NUP88Q99567 741 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms