RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 FASTKD5Q7L8L6 764 aaKnown RBP21.84■■□□□ 1.09
CDX4-201ENST00000373514 RALYLQ86SE5 291 aaKnown RBP21.84■■□□□ 1.09
CDX4-201ENST00000373514 MB21D2Q8IYB1 491 aaPredicted RBP21.84■■□□□ 1.09
CDX4-201ENST00000373514 NCOA7Q8NI08 942 aa21.84■■□□□ 1.09
CDX4-201ENST00000373514 CHMP4CQ96CF2 233 aa21.84■■□□□ 1.09
CDX4-201ENST00000373514 EIF5BO60841 1220 aaKnown RBP21.83■■□□□ 1.09
CDX4-201ENST00000373514 USP14P54578 494 aa21.83■■□□□ 1.09
CDX4-201ENST00000373514 ANTXR2P58335 489 aa21.83■■□□□ 1.09
CDX4-201ENST00000373514 TRDNQ13061 729 aa21.83■■□□□ 1.09
CDX4-201ENST00000373514 RCSD1Q6JBY9 416 aa21.83■■□□□ 1.09
CDX4-201ENST00000373514 C12orf42Q96LP6 360 aa21.83■■□□□ 1.09
CDX4-201ENST00000373514 R3HDMLQ9H3Y0 253 aa21.83■■□□□ 1.09
CDX4-201ENST00000373514 VCPKMTQ9H867 229 aa21.83■■□□□ 1.09
CDX4-201ENST00000373514 TNKSO95271 1327 aa21.83■■□□□ 1.08
CDX4-201ENST00000373514 CYP2C8P10632 490 aa21.82■■□□□ 1.08
CDX4-201ENST00000373514 CRHR2Q13324 411 aa21.82■■□□□ 1.08
CDX4-201ENST00000373514 SH2D4AQ9H788 454 aa21.82■■□□□ 1.08
CDX4-201ENST00000373514 TCP11L1Q9NUJ3 509 aa21.82■■□□□ 1.08
CDX4-201ENST00000373514 SNX14Q9Y5W7 946 aa21.82■■□□□ 1.08
CDX4-201ENST00000373514 TBC1D8O95759 1140 aa21.81■■□□□ 1.08
CDX4-201ENST00000373514 NOVP48745 357 aa21.81■■□□□ 1.08
CDX4-201ENST00000373514 TAF1CQ15572 869 aaPredicted RBP21.81■■□□□ 1.08
CDX4-201ENST00000373514 NUP88Q99567 741 aaPredicted RBP21.81■■□□□ 1.08
CDX4-201ENST00000373514 MGAMO43451 1857 aa21.81■■□□□ 1.08
CDX4-201ENST00000373514 FOXN1O15353 648 aa21.8■■□□□ 1.08
CDX4-201ENST00000373514 OTUD7BQ6GQQ9 843 aa21.8■■□□□ 1.08
CDX4-201ENST00000373514 ENAHQ8N8S7 591 aaPredicted RBP21.8■■□□□ 1.08
CDX4-201ENST00000373514 KCNB2Q92953 911 aa21.8■■□□□ 1.08
CDX4-201ENST00000373514 ZSCAN10Q96SZ4 725 aaPredicted RBP21.8■■□□□ 1.08
CDX4-201ENST00000373514 BEGAINQ9BUH8 593 aa21.8■■□□□ 1.08
CDX4-201ENST00000373514 RPAP3Q9H6T3 665 aaPredicted RBP21.8■■□□□ 1.08
CDX4-201ENST00000373514 GOPCQ9HD26 462 aa21.8■■□□□ 1.08
CDX4-201ENST00000373514 MTMR7Q9Y216 660 aa21.8■■□□□ 1.08
CDX4-201ENST00000373514 CASP8AP2Q9UKL3 1982 aa21.8■■□□□ 1.08
CDX4-201ENST00000373514 NDUFB10O96000 172 aa21.8■■□□□ 1.08
CDX4-201ENST00000373514 IQCA1Q86XH1 822 aa21.8■■□□□ 1.08
CDX4-201ENST00000373514 MKL1Q969V6 931 aa21.8■■□□□ 1.08
CDX4-201ENST00000373514 TBC1D32Q96NH3 1257 aa21.8■■□□□ 1.08
CDX4-201ENST00000373514 TMEM47Q9BQJ4 181 aa21.8■■□□□ 1.08
CDX4-201ENST00000373514 UBAC1Q9BSL1 405 aa21.8■■□□□ 1.08
CDX4-201ENST00000373514 SENP2Q9HC62 589 aa21.8■■□□□ 1.08
CDX4-201ENST00000373514 EPB41L2O43491 1005 aaKnown RBP21.79■■□□□ 1.08
CDX4-201ENST00000373514 CPA1P15085 419 aa21.79■■□□□ 1.08
CDX4-201ENST00000373514 ZKSCAN1P17029 563 aaPredicted RBP21.79■■□□□ 1.08
CDX4-201ENST00000373514 TCEANC2Q96MN5 208 aa21.79■■□□□ 1.08
CDX4-201ENST00000373514 C22orf23Q9BZE7 217 aa21.79■■□□□ 1.08
CDX4-201ENST00000373514 GPHNQ9NQX3 736 aaPredicted RBP21.79■■□□□ 1.08
CDX4-201ENST00000373514 SAGE1Q9NXZ1 904 aa21.79■■□□□ 1.08
CDX4-201ENST00000373514 ADGRA2Q96PE1 1338 aa21.79■■□□□ 1.08
CDX4-201ENST00000373514 F5H6K3 240 aa21.78■■□□□ 1.08
CDX4-201ENST00000373514 ALDH1A1P00352 501 aa21.78■■□□□ 1.08
CDX4-201ENST00000373514 KLRC3Q07444 240 aa21.78■■□□□ 1.08
CDX4-201ENST00000373514 SEC23AQ15436 765 aa21.78■■□□□ 1.08
CDX4-201ENST00000373514 TSGA10IPQ3SY00 556 aa21.78■■□□□ 1.08
CDX4-201ENST00000373514 FAM83BQ5T0W9 1011 aa21.78■■□□□ 1.08
CDX4-201ENST00000373514 LRRC2Q9BYS8 371 aa21.78■■□□□ 1.08
CDX4-201ENST00000373514 TANGO6Q9C0B7 1094 aa21.78■■□□□ 1.08
CDX4-201ENST00000373514 ASCC2Q9H1I8 757 aaPredicted RBP21.78■■□□□ 1.08
CDX4-201ENST00000373514 ZCCHC17Q9NP64 241 aaKnown RBP21.78■■□□□ 1.08
CDX4-201ENST00000373514 CA12O43570 354 aa21.77■■□□□ 1.08
CDX4-201ENST00000373514 PRC1O43663 620 aa21.77■■□□□ 1.08
CDX4-201ENST00000373514 TOP1P11387 765 aaKnown RBP21.77■■□□□ 1.08
CDX4-201ENST00000373514 GMCL1P1Q8NEA9 526 aa21.77■■□□□ 1.08
CDX4-201ENST00000373514 LPAR1Q92633 364 aa21.77■■□□□ 1.08
CDX4-201ENST00000373514 JAKMIP1Q96N16 626 aaKnown RBP21.77■■□□□ 1.08
CDX4-201ENST00000373514 NEK1Q96PY6 1258 aa21.77■■□□□ 1.08
CDX4-201ENST00000373514 SLC45A1Q9Y2W3 748 aa21.77■■□□□ 1.08
CDX4-201ENST00000373514 WDR46O15213 610 aaKnown RBP21.76■■□□□ 1.07
CDX4-201ENST00000373514 PEX10O60683 326 aa21.76■■□□□ 1.07
CDX4-201ENST00000373514 NT5C2P49902 561 aa21.76■■□□□ 1.07
CDX4-201ENST00000373514 IRX3P78415 501 aaPredicted RBP21.76■■□□□ 1.07
CDX4-201ENST00000373514 SLFN13Q68D06 897 aa21.76■■□□□ 1.07
CDX4-201ENST00000373514 PARK7Q99497 189 aaKnown RBP21.76■■□□□ 1.07
CDX4-201ENST00000373514 IFIT3O14879 490 aaKnown RBP21.75■■□□□ 1.07
CDX4-201ENST00000373514 HSPA8P11142 646 aaKnown RBP21.75■■□□□ 1.07
CDX4-201ENST00000373514 MCCP23508 829 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 HOXA7P31268 230 aaPredicted RBP21.75■■□□□ 1.07
CDX4-201ENST00000373514 MCM5P33992 734 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 ANP32AP39687 249 aaKnown RBP21.75■■□□□ 1.07
CDX4-201ENST00000373514 PPP4R3BQ5MIZ7 849 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 CATSPERGQ6ZRH7 1159 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 DGKHQ86XP1 1220 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 ZFYVE28Q9HCC9 887 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 CPA4Q9UI42 421 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 USP17L15C9J2P7 530 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 USP17L13C9JLJ4 530 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 USP17L11C9JVI0 530 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 USP17L18D6R9N7 530 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 USP17L22D6RA61 530 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 USP17L17D6RBQ6 530 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 USP17L19D6RCP7 530 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 USP17L20D6RJB6 530 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 OSBPP22059 807 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 USP17L24Q0WX57 530 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 PABPC4Q13310 644 aaKnown RBP eCLIP21.75■■□□□ 1.07
CDX4-201ENST00000373514 KRT32Q14532 448 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 POTEEQ6S8J3 1075 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 SAMD1Q6SPF0 538 aaPredicted RBP21.75■■□□□ 1.07
CDX4-201ENST00000373514 TTC14Q96N46 770 aa21.75■■□□□ 1.07
CDX4-201ENST00000373514 P2RX7Q99572 595 aaKnown RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms