RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 MTMR3Q13615 1198 aa15.74■□□□□ 0.11
LMX1B-202ENST00000373474 SH2D4AQ9H788 454 aa15.74■□□□□ 0.11
LMX1B-202ENST00000373474 PCDHA7Q9UN72 937 aa15.74■□□□□ 0.11
LMX1B-202ENST00000373474 B4DLN1 442 aa15.74■□□□□ 0.11
LMX1B-202ENST00000373474 KCNJ18B7U540 433 aa15.74■□□□□ 0.11
LMX1B-202ENST00000373474 KCNQ3O43525 872 aa15.74■□□□□ 0.11
LMX1B-202ENST00000373474 CTSWP56202 376 aa15.74■□□□□ 0.11
LMX1B-202ENST00000373474 KCNJ12Q14500 433 aa15.74■□□□□ 0.11
LMX1B-202ENST00000373474 ZNF654Q8IZM8 581 aa15.74■□□□□ 0.11
LMX1B-202ENST00000373474 VCX3AQ9NNX9 186 aa15.74■□□□□ 0.11
LMX1B-202ENST00000373474 MED23Q9ULK4 1368 aa15.74■□□□□ 0.11
LMX1B-202ENST00000373474 NCAPH2Q6IBW4 605 aa15.74■□□□□ 0.11
LMX1B-202ENST00000373474 PNMA8AQ86V59 439 aaPredicted RBP15.74■□□□□ 0.11
LMX1B-202ENST00000373474 ANTXR1Q9H6X2 564 aa15.74■□□□□ 0.11
LMX1B-202ENST00000373474 PDE1CQ14123 709 aaPredicted RBP15.74■□□□□ 0.11
LMX1B-202ENST00000373474 MORC3Q14149 939 aa15.74■□□□□ 0.11
LMX1B-202ENST00000373474 DYMQ7RTS9 669 aa15.74■□□□□ 0.11
LMX1B-202ENST00000373474 CCDC87Q9NVE4 849 aa15.74■□□□□ 0.11
LMX1B-202ENST00000373474 GNPATO15228 680 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 SCRN1Q12765 414 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 LRMPQ12912 555 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 CCDC84Q86UT8 332 aaPredicted RBP15.73■□□□□ 0.11
LMX1B-202ENST00000373474 MAP4K1Q92918 833 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 DDX27Q96GQ7 796 aaKnown RBP15.73■□□□□ 0.11
LMX1B-202ENST00000373474 PARP3Q9Y6F1 533 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 SNX16P57768 344 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 TCIRG1Q13488 830 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 TRAPPC3LQ5T215 181 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 MAP3K21Q5TCX8 1036 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 ARPP21Q9UBL0 812 aaPredicted RBP15.73■□□□□ 0.11
LMX1B-202ENST00000373474 EFCAB8A8MWE9 144 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 ERVV-2B6SEH9 535 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 CHMP2AO43633 222 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 ZNF131P52739 623 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 MIER3Q7Z3K6 550 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 SDCCAG8Q86SQ7 713 aaPredicted RBP15.73■□□□□ 0.11
LMX1B-202ENST00000373474 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.73■□□□□ 0.11
LMX1B-202ENST00000373474 MAK16Q9BXY0 300 aaKnown RBP15.73■□□□□ 0.11
LMX1B-202ENST00000373474 ZFYVE16Q7Z3T8 1539 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 TMEM2Q9UHN6 1383 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 PHLDB3Q6NSJ2 640 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 CNBD1Q8NA66 436 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 ORAI2Q96SN7 254 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 ZSCAN10Q96SZ4 725 aaPredicted RBP15.73■□□□□ 0.11
LMX1B-202ENST00000373474 EXOC7Q9UPT5 735 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 ABCA8O94911 1581 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 GNA14O95837 355 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 NDUFA8P51970 172 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 RBBP5Q15291 538 aaKnown RBP15.73■□□□□ 0.11
LMX1B-202ENST00000373474 ZSCAN26Q16670 478 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 INF2Q27J81 1249 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 SAR1BQ9Y6B6 198 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 MAST3O60307 1309 aa15.73■□□□□ 0.11
LMX1B-202ENST00000373474 SMTNP53814 917 aa15.72■□□□□ 0.11
LMX1B-202ENST00000373474 EIF6P56537 245 aaKnown RBP15.72■□□□□ 0.11
LMX1B-202ENST00000373474 KLHL30Q0D2K2 578 aa15.72■□□□□ 0.11
LMX1B-202ENST00000373474 RPAINQ86UA6 219 aa15.72■□□□□ 0.11
LMX1B-202ENST00000373474 AFAP1L2Q8N4X5 818 aa15.72■□□□□ 0.11
LMX1B-202ENST00000373474 TDRD7Q8NHU6 1098 aaKnown RBP15.72■□□□□ 0.11
LMX1B-202ENST00000373474 IFIH1Q9BYX4 1025 aaKnown RBP15.72■□□□□ 0.11
LMX1B-202ENST00000373474 CEP104O60308 925 aa15.72■□□□□ 0.11
LMX1B-202ENST00000373474 CD2BP2O95400 341 aaKnown RBP15.72■□□□□ 0.11
LMX1B-202ENST00000373474 MICAL1Q8TDZ2 1067 aa15.72■□□□□ 0.11
LMX1B-202ENST00000373474 GGA1Q9UJY5 639 aa15.72■□□□□ 0.11
LMX1B-202ENST00000373474 FAN1Q9Y2M0 1017 aa15.72■□□□□ 0.11
LMX1B-202ENST00000373474 CLIC4Q9Y696 253 aa15.72■□□□□ 0.11
LMX1B-202ENST00000373474 TTC36A6NLP5 189 aa15.72■□□□□ 0.11
LMX1B-202ENST00000373474 VGLL3A8MV65 326 aa15.72■□□□□ 0.11
LMX1B-202ENST00000373474 PDIA3P30101 505 aaKnown RBP15.72■□□□□ 0.11
LMX1B-202ENST00000373474 LIN9Q5TKA1 542 aa15.72■□□□□ 0.11
LMX1B-202ENST00000373474 TYW1BQ6NUM6 668 aa15.72■□□□□ 0.11
LMX1B-202ENST00000373474 DPH6Q7L8W6 267 aa15.72■□□□□ 0.11
LMX1B-202ENST00000373474 IFNL3Q8IZI9 196 aa15.72■□□□□ 0.11
LMX1B-202ENST00000373474 FNBP1Q96RU3 617 aa15.72■□□□□ 0.11
LMX1B-202ENST00000373474 NEO1Q92859 1461 aa15.72■□□□□ 0.11
LMX1B-202ENST00000373474 KLHL7Q8IXQ5 586 aa15.72■□□□□ 0.11
LMX1B-202ENST00000373474 STAMQ92783 540 aa15.72■□□□□ 0.11
LMX1B-202ENST00000373474 DNM3Q9UQ16 869 aa15.72■□□□□ 0.11
LMX1B-202ENST00000373474 TACC3Q9Y6A5 838 aa15.72■□□□□ 0.11
LMX1B-202ENST00000373474 A0A1W2PQ27 194 aa15.71■□□□□ 0.11
LMX1B-202ENST00000373474 A0A1W2PQ64 194 aa15.71■□□□□ 0.11
LMX1B-202ENST00000373474 A0A1W2PQD8 194 aa15.71■□□□□ 0.11
LMX1B-202ENST00000373474 hCG_1642624A0A1W2PR95 340 aa15.71■□□□□ 0.11
LMX1B-202ENST00000373474 MGEA5O60502 916 aa15.71■□□□□ 0.11
LMX1B-202ENST00000373474 FLOT1O75955 427 aa15.71■□□□□ 0.11
LMX1B-202ENST00000373474 PPM1FP49593 454 aaPredicted RBP15.71■□□□□ 0.11
LMX1B-202ENST00000373474 RPS6KA1Q15418 735 aa15.71■□□□□ 0.11
LMX1B-202ENST00000373474 HERC4Q5GLZ8 1057 aaPredicted RBP15.71■□□□□ 0.11
LMX1B-202ENST00000373474 SND1Q7KZF4 910 aaKnown RBP eCLIP15.71■□□□□ 0.11
LMX1B-202ENST00000373474 RTEL1Q9NZ71 1219 aa15.71■□□□□ 0.11
LMX1B-202ENST00000373474 PYCARDQ9ULZ3 195 aa15.71■□□□□ 0.11
LMX1B-202ENST00000373474 EPSTI1Q96J88 318 aa15.71■□□□□ 0.11
LMX1B-202ENST00000373474 C8orf37Q96NL8 207 aa15.71■□□□□ 0.11
LMX1B-202ENST00000373474 PSDA5PKW4 1024 aaPredicted RBP15.71■□□□□ 0.11
LMX1B-202ENST00000373474 ERCC5P28715 1186 aaPredicted RBP15.71■□□□□ 0.11
LMX1B-202ENST00000373474 CUL4AQ13619 759 aa15.71■□□□□ 0.11
LMX1B-202ENST00000373474 SPATS2LQ9NUQ6 558 aaKnown RBP15.71■□□□□ 0.11
LMX1B-202ENST00000373474 TFCP2L1Q9NZI6 479 aa15.71■□□□□ 0.11
LMX1B-202ENST00000373474 LARSQ9P2J5 1176 aaKnown RBP15.71■□□□□ 0.11
LMX1B-202ENST00000373474 PREX2Q70Z35 1606 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms