RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 HPS5Q9UPZ3 1129 aa13.6□□□□□ -0.23
NCDN-202ENST00000373243 ZBTB1Q9Y2K1 713 aa13.6□□□□□ -0.23
NCDN-202ENST00000373243 FAN1Q9Y2M0 1017 aa13.6□□□□□ -0.23
NCDN-202ENST00000373243 LUC7L2Q9Y383 392 aaKnown RBP13.6□□□□□ -0.23
NCDN-202ENST00000373243 ITSN1Q15811 1721 aa13.6□□□□□ -0.23
NCDN-202ENST00000373243 PPP6R2O75170 966 aa13.6□□□□□ -0.23
NCDN-202ENST00000373243 ARID4AP29374 1257 aaPredicted RBP13.6□□□□□ -0.23
NCDN-202ENST00000373243 UTYO14607 1347 aa13.59□□□□□ -0.23
NCDN-202ENST00000373243 MYO1BO43795 1136 aa13.59□□□□□ -0.23
NCDN-202ENST00000373243 AKR1B10O60218 316 aa13.59□□□□□ -0.23
NCDN-202ENST00000373243 STX10O60499 249 aa13.59□□□□□ -0.23
NCDN-202ENST00000373243 PDE8AO60658 829 aa13.59□□□□□ -0.23
NCDN-202ENST00000373243 TBC1D8O95759 1140 aa13.59□□□□□ -0.23
NCDN-202ENST00000373243 PCCAP05165 728 aaPredicted RBP13.59□□□□□ -0.23
NCDN-202ENST00000373243 FMR1Q06787 632 aaKnown RBP eCLIP13.59□□□□□ -0.23
NCDN-202ENST00000373243 CC2D1AQ6P1N0 951 aaPredicted RBP13.59□□□□□ -0.23
NCDN-202ENST00000373243 EFCAB13Q8IY85 973 aa13.59□□□□□ -0.23
NCDN-202ENST00000373243 IL17RAQ96F46 866 aa13.59□□□□□ -0.23
NCDN-202ENST00000373243 KAT14Q9H8E8 782 aa13.59□□□□□ -0.23
NCDN-202ENST00000373243 RBM28Q9NW13 759 aaKnown RBP13.59□□□□□ -0.23
NCDN-202ENST00000373243 ANKRD26Q9UPS8 1709 aa13.59□□□□□ -0.23
NCDN-202ENST00000373243 ARID5AQ03989 594 aa13.59□□□□□ -0.23
NCDN-202ENST00000373243 LONRF2Q1L5Z9 754 aa13.59□□□□□ -0.23
NCDN-202ENST00000373243 CCDC152Q4G0S7 254 aa13.59□□□□□ -0.23
NCDN-202ENST00000373243 N4BP2L2Q92802 583 aaPredicted RBP13.59□□□□□ -0.23
NCDN-202ENST00000373243 NAPGQ99747 312 aaPredicted RBP13.59□□□□□ -0.23
NCDN-202ENST00000373243 FAM107BQ9H098 131 aa13.59□□□□□ -0.23
NCDN-202ENST00000373243 MMRN2Q9H8L6 949 aa13.59□□□□□ -0.23
NCDN-202ENST00000373243 HEG1Q9ULI3 1381 aa13.59□□□□□ -0.23
NCDN-202ENST00000373243 CIAO1O76071 339 aa13.59□□□□□ -0.23
NCDN-202ENST00000373243 CORO7P57737 925 aa13.59□□□□□ -0.23
NCDN-202ENST00000373243 ASIC1P78348 528 aa13.59□□□□□ -0.23
NCDN-202ENST00000373243 PTGDRQ13258 359 aa13.59□□□□□ -0.23
NCDN-202ENST00000373243 CACNA2D4Q7Z3S7 1137 aa13.59□□□□□ -0.23
NCDN-202ENST00000373243 TTLL11Q8NHH1 800 aa13.59□□□□□ -0.23
NCDN-202ENST00000373243 SH3BP1Q9Y3L3 701 aa13.59□□□□□ -0.23
NCDN-202ENST00000373243 BAZ2BQ9UIF8 2168 aaKnown RBP13.58□□□□□ -0.23
NCDN-202ENST00000373243 USP17L12C9JPN9 530 aa13.58□□□□□ -0.24
NCDN-202ENST00000373243 USP17L21D6R901 530 aa13.58□□□□□ -0.24
NCDN-202ENST00000373243 ZRANB2O95218 330 aaKnown RBP eCLIP13.58□□□□□ -0.24
NCDN-202ENST00000373243 KRT18P05783 430 aaKnown RBP13.58□□□□□ -0.24
NCDN-202ENST00000373243 HDXQ7Z353 690 aa13.58□□□□□ -0.24
NCDN-202ENST00000373243 RASGRP4Q8TDF6 673 aa13.58□□□□□ -0.24
NCDN-202ENST00000373243 CEP89Q96ST8 783 aa13.58□□□□□ -0.24
NCDN-202ENST00000373243 MCM9Q9NXL9 1143 aa13.58□□□□□ -0.24
NCDN-202ENST00000373243 TFCP2L1Q9NZI6 479 aa13.58□□□□□ -0.24
NCDN-202ENST00000373243 UBN2Q6ZU65 1347 aa13.58□□□□□ -0.24
NCDN-202ENST00000373243 G3V3G9 751 aa13.58□□□□□ -0.24
NCDN-202ENST00000373243 H3BQF6 201 aa13.58□□□□□ -0.24
NCDN-202ENST00000373243 RNASE9P60153 205 aaKnown RBP13.58□□□□□ -0.24
NCDN-202ENST00000373243 MRPS25P82663 173 aaKnown RBP13.58□□□□□ -0.24
NCDN-202ENST00000373243 DCAF8Q5TAQ9 597 aa13.58□□□□□ -0.24
NCDN-202ENST00000373243 STRBPQ96SI9 672 aaKnown RBP13.58□□□□□ -0.24
NCDN-202ENST00000373243 AATFQ9NY61 560 aaKnown RBP eCLIP13.58□□□□□ -0.24
NCDN-202ENST00000373243 PPARAQ07869 468 aa13.58□□□□□ -0.24
NCDN-202ENST00000373243 RASGRF1Q13972 1273 aa13.58□□□□□ -0.24
NCDN-202ENST00000373243 RESP18Q5W5W9 173 aa13.58□□□□□ -0.24
NCDN-202ENST00000373243 ZNF444Q8N0Y2 327 aaPredicted RBP13.58□□□□□ -0.24
NCDN-202ENST00000373243 NELFBQ8WX92 580 aa13.58□□□□□ -0.24
NCDN-202ENST00000373243 BTG4Q9NY30 223 aa13.58□□□□□ -0.24
NCDN-202ENST00000373243 ANKARQ7Z5J8 1434 aa13.57□□□□□ -0.24
NCDN-202ENST00000373243 MMP1P03956 469 aa13.57□□□□□ -0.24
NCDN-202ENST00000373243 PEX19P40855 299 aa13.57□□□□□ -0.24
NCDN-202ENST00000373243 NBPF20Q3BBV1 942 aa13.57□□□□□ -0.24
NCDN-202ENST00000373243 TCP11L1Q9NUJ3 509 aa13.57□□□□□ -0.24
NCDN-202ENST00000373243 PHLPP2Q6ZVD8 1323 aa13.57□□□□□ -0.24
NCDN-202ENST00000373243 PAX7P23759 505 aa13.57□□□□□ -0.24
NCDN-202ENST00000373243 UBE3CQ15386 1083 aa13.57□□□□□ -0.24
NCDN-202ENST00000373243 PIK3R5Q8WYR1 880 aa13.57□□□□□ -0.24
NCDN-202ENST00000373243 PSMA7O14818 248 aa13.57□□□□□ -0.24
NCDN-202ENST00000373243 PLCD1P51178 756 aa13.57□□□□□ -0.24
NCDN-202ENST00000373243 DYNLL1P63167 89 aaKnown RBP13.57□□□□□ -0.24
NCDN-202ENST00000373243 TBC1D8BQ0IIM8 1120 aa13.57□□□□□ -0.24
NCDN-202ENST00000373243 PAK1Q13153 545 aa13.57□□□□□ -0.24
NCDN-202ENST00000373243 CEP57Q86XR8 500 aa13.57□□□□□ -0.24
NCDN-202ENST00000373243 SUGP1Q8IWZ8 645 aaKnown RBP13.57□□□□□ -0.24
NCDN-202ENST00000373243 GPKOWQ92917 476 aaPredicted RBP eCLIP13.57□□□□□ -0.24
NCDN-202ENST00000373243 ADGRL3Q9HAR2 1447 aa13.57□□□□□ -0.24
NCDN-202ENST00000373243 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.57□□□□□ -0.24
NCDN-202ENST00000373243 A0A087WUV0 522 aaPredicted RBP13.56□□□□□ -0.24
NCDN-202ENST00000373243 SPAG1Q07617 926 aa13.56□□□□□ -0.24
NCDN-202ENST00000373243 GIGYF2Q6Y7W6 1299 aaKnown RBP13.56□□□□□ -0.24
NCDN-202ENST00000373243 NLRP10Q86W26 655 aa13.56□□□□□ -0.24
NCDN-202ENST00000373243 ANKRD18AQ8IVF6 992 aa13.56□□□□□ -0.24
NCDN-202ENST00000373243 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.56□□□□□ -0.24
NCDN-202ENST00000373243 IRAK4Q9NWZ3 460 aa13.56□□□□□ -0.24
NCDN-202ENST00000373243 ANKIB1Q9P2G1 1089 aa13.56□□□□□ -0.24
NCDN-202ENST00000373243 MKRN1Q9UHC7 482 aaKnown RBP13.56□□□□□ -0.24
NCDN-202ENST00000373243 POTEB2H3BUK9 544 aa13.56□□□□□ -0.24
NCDN-202ENST00000373243 NCAPHQ15003 741 aa13.56□□□□□ -0.24
NCDN-202ENST00000373243 MAP9Q49MG5 647 aa13.56□□□□□ -0.24
NCDN-202ENST00000373243 SPATA1Q5VX52 437 aa13.56□□□□□ -0.24
NCDN-202ENST00000373243 BRINP3Q76B58 766 aa13.56□□□□□ -0.24
NCDN-202ENST00000373243 LY9Q9HBG7 655 aa13.56□□□□□ -0.24
NCDN-202ENST00000373243 N4BP1O75113 896 aaKnown RBP13.55□□□□□ -0.24
NCDN-202ENST00000373243 FMNL1O95466 1100 aaPredicted RBP13.55□□□□□ -0.24
NCDN-202ENST00000373243 IFNAR1P17181 557 aa13.55□□□□□ -0.24
NCDN-202ENST00000373243 LETM2Q2VYF4 491 aa13.55□□□□□ -0.24
NCDN-202ENST00000373243 NCAPH2Q6IBW4 605 aa13.55□□□□□ -0.24
NCDN-202ENST00000373243 CCDC42Q96M95 316 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms