RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 RILPQ96NA2 401 aa12.73□□□□□ -0.37
VCL-202ENST00000372755 SLF1Q9BQI6 1058 aa12.73□□□□□ -0.37
VCL-202ENST00000372755 ZNF408Q9H9D4 720 aa12.73□□□□□ -0.37
VCL-202ENST00000372755 ATP8A2Q9NTI2 1148 aa12.73□□□□□ -0.37
VCL-202ENST00000372755 ARPP21Q9UBL0 812 aaPredicted RBP12.73□□□□□ -0.37
VCL-202ENST00000372755 PALM2Q8IXS6 379 aa12.73□□□□□ -0.37
VCL-202ENST00000372755 RIC8AQ9NPQ8 531 aa12.73□□□□□ -0.37
VCL-202ENST00000372755 BTG4Q9NY30 223 aa12.73□□□□□ -0.37
VCL-202ENST00000372755 SLC5A4Q9NY91 659 aa12.73□□□□□ -0.37
VCL-202ENST00000372755 MIER3Q7Z3K6 550 aa12.73□□□□□ -0.37
VCL-202ENST00000372755 RSPH3Q86UC2 560 aa12.73□□□□□ -0.37
VCL-202ENST00000372755 CCDC170Q8IYT3 715 aa12.73□□□□□ -0.37
VCL-202ENST00000372755 TTLL3Q9Y4R7 772 aa12.73□□□□□ -0.37
VCL-202ENST00000372755 PCDHB13Q9Y5F0 798 aa12.73□□□□□ -0.37
VCL-202ENST00000372755 LAMC3Q9Y6N6 1575 aa12.73□□□□□ -0.37
VCL-202ENST00000372755 N4BP1O75113 896 aaKnown RBP12.73□□□□□ -0.37
VCL-202ENST00000372755 IRX3P78415 501 aaPredicted RBP12.73□□□□□ -0.37
VCL-202ENST00000372755 KRT71Q3SY84 523 aa12.73□□□□□ -0.37
VCL-202ENST00000372755 MUM1L1Q5H9M0 696 aa12.73□□□□□ -0.37
VCL-202ENST00000372755 RRAGAQ7L523 313 aa12.73□□□□□ -0.37
VCL-202ENST00000372755 CCDC87Q9NVE4 849 aa12.73□□□□□ -0.37
VCL-202ENST00000372755 MTX1Q13505 466 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 ARHGAP44Q17R89 818 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 GNPTABQ3T906 1256 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 LONRF3Q496Y0 759 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 PNMA8AQ86V59 439 aaPredicted RBP12.72□□□□□ -0.37
VCL-202ENST00000372755 SMAP1Q8IYB5 467 aaPredicted RBP12.72□□□□□ -0.37
VCL-202ENST00000372755 GOLGA5Q8TBA6 731 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 HAUS1Q96CS2 278 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 LSM14BQ9BX40 385 aaKnown RBP12.72□□□□□ -0.37
VCL-202ENST00000372755 STX2P32856 288 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 KRT81Q14533 505 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 RPS6KA2Q15349 733 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 ELF2Q15723 593 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 PDZD4Q76G19 769 aaPredicted RBP12.72□□□□□ -0.37
VCL-202ENST00000372755 CHURC1Q8WUH1 139 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 HVCN1Q96D96 273 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 AS3MTQ9HBK9 375 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 H0YCG3 227 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 TXNDC9O14530 226 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 YARSP54577 528 aaKnown RBP12.72□□□□□ -0.37
VCL-202ENST00000372755 GABPB1Q06547 395 aaPredicted RBP12.72□□□□□ -0.37
VCL-202ENST00000372755 HADHQ16836 314 aaKnown RBP12.72□□□□□ -0.37
VCL-202ENST00000372755 TYW1BQ6NUM6 668 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 FAM227BQ96M60 508 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 KRT12Q99456 494 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 DSCC1Q9BVC3 393 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 MIS12Q9H081 205 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 GAS7O60861 476 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 ATF7P17544 494 aaPredicted RBP12.72□□□□□ -0.37
VCL-202ENST00000372755 OTUD7BQ6GQQ9 843 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 TRIM50Q86XT4 487 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 RGS16O15492 202 aaPredicted RBP12.72□□□□□ -0.37
VCL-202ENST00000372755 STAT1P42224 750 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 TCIRG1Q13488 830 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 WHAMMP3Q1A5X7 153 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 SPOUT1Q5T280 376 aaKnown RBP12.72□□□□□ -0.37
VCL-202ENST00000372755 U2AF1L4Q8WU68 220 aaKnown RBP12.72□□□□□ -0.37
VCL-202ENST00000372755 ZNF532Q9HCE3 1301 aa12.72□□□□□ -0.37
VCL-202ENST00000372755 MAPKAPK5Q8IW41 473 aa12.71□□□□□ -0.37
VCL-202ENST00000372755 TPH2Q8IWU9 490 aa12.71□□□□□ -0.37
VCL-202ENST00000372755 TRIM58Q8NG06 486 aa12.71□□□□□ -0.37
VCL-202ENST00000372755 PHKBQ93100 1093 aa12.71□□□□□ -0.37
VCL-202ENST00000372755 PFDN6O15212 129 aa12.71□□□□□ -0.37
VCL-202ENST00000372755 STAM2O75886 525 aa12.71□□□□□ -0.37
VCL-202ENST00000372755 XRCC5P13010 732 aaKnown RBP12.71□□□□□ -0.37
VCL-202ENST00000372755 ZBTB8OSQ8IWT0 167 aa12.71□□□□□ -0.37
VCL-202ENST00000372755 G2E3Q7L622 706 aa12.71□□□□□ -0.37
VCL-202ENST00000372755 CTAGE3PQ8IX95 158 aa12.71□□□□□ -0.37
VCL-202ENST00000372755 ZNF594Q96JF6 807 aaPredicted RBP12.71□□□□□ -0.37
VCL-202ENST00000372755 HAUS8Q9BT25 410 aa12.71□□□□□ -0.37
VCL-202ENST00000372755 MYL10Q9BUA6 226 aa12.71□□□□□ -0.37
VCL-202ENST00000372755 SPC25Q9HBM1 224 aa12.71□□□□□ -0.37
VCL-202ENST00000372755 RABGAP1Q9Y3P9 1069 aa12.71□□□□□ -0.37
VCL-202ENST00000372755 SBNO1A3KN83 1393 aa12.71□□□□□ -0.37
VCL-202ENST00000372755 TFAP4Q01664 338 aa12.71□□□□□ -0.38
VCL-202ENST00000372755 PLCB4Q15147 1175 aa12.71□□□□□ -0.38
VCL-202ENST00000372755 MED10Q9BTT4 135 aa12.71□□□□□ -0.38
VCL-202ENST00000372755 ZNF277Q9NRM2 450 aaPredicted RBP12.71□□□□□ -0.38
VCL-202ENST00000372755 KCNJ14Q9UNX9 436 aa12.71□□□□□ -0.38
VCL-202ENST00000372755 MAP3K19Q56UN5 1328 aa12.71□□□□□ -0.38
VCL-202ENST00000372755 HGSO14964 777 aaPredicted RBP12.71□□□□□ -0.38
VCL-202ENST00000372755 NR1I2O75469 434 aa12.71□□□□□ -0.38
VCL-202ENST00000372755 KRT3P12035 628 aa12.71□□□□□ -0.38
VCL-202ENST00000372755 NIM1KQ8IY84 436 aa12.71□□□□□ -0.38
VCL-202ENST00000372755 TGFBRAP1Q8WUH2 860 aa12.71□□□□□ -0.38
VCL-202ENST00000372755 GLG1Q92896 1179 aa12.71□□□□□ -0.38
VCL-202ENST00000372755 BLZF1Q9H2G9 400 aa12.71□□□□□ -0.38
VCL-202ENST00000372755 FAM207AQ9NSI2 230 aaPredicted RBP12.71□□□□□ -0.38
VCL-202ENST00000372755 SAR1BQ9Y6B6 198 aa12.71□□□□□ -0.38
VCL-202ENST00000372755 SMCO2A6NFE2 343 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 TAF5LO75529 589 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 TNNC2P02585 160 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 ERCC3P19447 782 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 RAD51AP2Q09MP3 1159 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 A0A1W2PP64 1363 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 GPATCH8Q9UKJ3 1502 aaKnown RBP12.7□□□□□ -0.38
VCL-202ENST00000372755 OATP04181 439 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 ALDH1B1P30837 517 aa12.7□□□□□ -0.38
VCL-202ENST00000372755 DLGAP5Q15398 846 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms