RNA–Protein interactions for RNA: ENST00000372443.6

KCNMA1-209, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,059 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-209ENST00000372443 CDC42BPBQ9Y5S2 1711 aa23.15■■□□□ 1.3
KCNMA1-209ENST00000372443 INPP5BP32019 993 aa23.15■■□□□ 1.3
KCNMA1-209ENST00000372443 GYG1P46976 350 aa23.15■■□□□ 1.3
KCNMA1-209ENST00000372443 PSDA5PKW4 1024 aaPredicted RBP23.14■■□□□ 1.3
KCNMA1-209ENST00000372443 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.14■■□□□ 1.3
KCNMA1-209ENST00000372443 CARMIL3Q8ND23 1372 aa23.14■■□□□ 1.3
KCNMA1-209ENST00000372443 PHKA1P46020 1223 aa23.14■■□□□ 1.3
KCNMA1-209ENST00000372443 CFAP221Q4G0U5 840 aa23.14■■□□□ 1.3
KCNMA1-209ENST00000372443 ERBB4Q15303 1308 aa23.14■■□□□ 1.29
KCNMA1-209ENST00000372443 PPP1R13BQ96KQ4 1090 aa23.14■■□□□ 1.29
KCNMA1-209ENST00000372443 FERMT1Q9BQL6 677 aa23.14■■□□□ 1.29
KCNMA1-209ENST00000372443 RCOR1Q9UKL0 485 aa23.14■■□□□ 1.29
KCNMA1-209ENST00000372443 SF3A3Q12874 501 aaKnown RBP eCLIP23.14■■□□□ 1.29
KCNMA1-209ENST00000372443 ZSCAN10Q96SZ4 725 aaPredicted RBP23.14■■□□□ 1.29
KCNMA1-209ENST00000372443 MAST3O60307 1309 aa23.14■■□□□ 1.29
KCNMA1-209ENST00000372443 ERVV-2B6SEH9 535 aa23.13■■□□□ 1.29
KCNMA1-209ENST00000372443 MYCNP04198 464 aaPredicted RBP23.13■■□□□ 1.29
KCNMA1-209ENST00000372443 PI4K2BQ8TCG2 481 aa23.13■■□□□ 1.29
KCNMA1-209ENST00000372443 NAP1L3Q99457 506 aaPredicted RBP23.13■■□□□ 1.29
KCNMA1-209ENST00000372443 COBLO75128 1261 aa23.13■■□□□ 1.29
KCNMA1-209ENST00000372443 DAAM2Q86T65 1068 aa23.13■■□□□ 1.29
KCNMA1-209ENST00000372443 TRIML1Q8N9V2 468 aa23.13■■□□□ 1.29
KCNMA1-209ENST00000372443 APOA5Q6Q788 366 aa23.13■■□□□ 1.29
KCNMA1-209ENST00000372443 MAEAQ7L5Y9 396 aa23.13■■□□□ 1.29
KCNMA1-209ENST00000372443 HINFPQ9BQA5 517 aa23.13■■□□□ 1.29
KCNMA1-209ENST00000372443 PAK2Q13177 524 aa23.13■■□□□ 1.29
KCNMA1-209ENST00000372443 INF2Q27J81 1249 aa23.13■■□□□ 1.29
KCNMA1-209ENST00000372443 SPATA1Q5VX52 437 aa23.13■■□□□ 1.29
KCNMA1-209ENST00000372443 ZBTB38Q8NAP3 1195 aaPredicted RBP23.13■■□□□ 1.29
KCNMA1-209ENST00000372443 LRRC45Q96CN5 670 aa23.13■■□□□ 1.29
KCNMA1-209ENST00000372443 DDX41Q9UJV9 622 aaKnown RBP23.13■■□□□ 1.29
KCNMA1-209ENST00000372443 SMCO2A6NFE2 343 aa23.12■■□□□ 1.29
KCNMA1-209ENST00000372443 ACTN4O43707 911 aaKnown RBP23.12■■□□□ 1.29
KCNMA1-209ENST00000372443 KRT5P13647 590 aa23.12■■□□□ 1.29
KCNMA1-209ENST00000372443 PPFIA1Q13136 1202 aa23.12■■□□□ 1.29
KCNMA1-209ENST00000372443 HGSO14964 777 aaPredicted RBP23.12■■□□□ 1.29
KCNMA1-209ENST00000372443 PTGDRQ13258 359 aa23.12■■□□□ 1.29
KCNMA1-209ENST00000372443 RPS6KA1Q15418 735 aa23.12■■□□□ 1.29
KCNMA1-209ENST00000372443 WHAMMP3Q1A5X7 153 aa23.12■■□□□ 1.29
KCNMA1-209ENST00000372443 BLIDQ8IZY5 108 aa23.12■■□□□ 1.29
KCNMA1-209ENST00000372443 UTP11Q9Y3A2 253 aaKnown RBP23.12■■□□□ 1.29
KCNMA1-209ENST00000372443 ADGRB3O60242 1522 aa23.12■■□□□ 1.29
KCNMA1-209ENST00000372443 BACH1O14867 736 aa23.12■■□□□ 1.29
KCNMA1-209ENST00000372443 BIRC3Q13489 604 aa23.12■■□□□ 1.29
KCNMA1-209ENST00000372443 TRAPPC3LQ5T215 181 aa23.12■■□□□ 1.29
KCNMA1-209ENST00000372443 SFMBT2Q5VUG0 894 aa23.12■■□□□ 1.29
KCNMA1-209ENST00000372443 GREM2Q9H772 168 aa23.12■■□□□ 1.29
KCNMA1-209ENST00000372443 BIN2Q9UBW5 565 aaPredicted RBP23.12■■□□□ 1.29
KCNMA1-209ENST00000372443 RNF17Q9BXT8 1623 aaKnown RBP23.12■■□□□ 1.29
KCNMA1-209ENST00000372443 SLC1A4P43007 532 aa23.12■■□□□ 1.29
KCNMA1-209ENST00000372443 NECTIN1Q15223 517 aa23.12■■□□□ 1.29
KCNMA1-209ENST00000372443 STX10O60499 249 aa23.11■■□□□ 1.29
KCNMA1-209ENST00000372443 SASH1O94885 1247 aa23.11■■□□□ 1.29
KCNMA1-209ENST00000372443 FMNL3Q8IVF7 1028 aa23.11■■□□□ 1.29
KCNMA1-209ENST00000372443 CCDC63Q8NA47 563 aa23.11■■□□□ 1.29
KCNMA1-209ENST00000372443 LINC00301Q8NCQ3 95 aa23.11■■□□□ 1.29
KCNMA1-209ENST00000372443 SYMPKQ92797 1274 aaKnown RBP23.11■■□□□ 1.29
KCNMA1-209ENST00000372443 GBP6Q6ZN66 633 aa23.11■■□□□ 1.29
KCNMA1-209ENST00000372443 POLR3EQ9NVU0 708 aa23.11■■□□□ 1.29
KCNMA1-209ENST00000372443 NKIRAS1Q9NYS0 192 aa23.11■■□□□ 1.29
KCNMA1-209ENST00000372443 PCCAP05165 728 aaPredicted RBP23.1■■□□□ 1.29
KCNMA1-209ENST00000372443 RBM26Q5T8P6 1007 aaKnown RBP23.1■■□□□ 1.29
KCNMA1-209ENST00000372443 PI16Q6UXB8 463 aa23.1■■□□□ 1.29
KCNMA1-209ENST00000372443 ROBO2Q9HCK4 1378 aa23.1■■□□□ 1.29
KCNMA1-209ENST00000372443 GPKOWQ92917 476 aaPredicted RBP eCLIP23.1■■□□□ 1.29
KCNMA1-209ENST00000372443 CTTNBP2NLQ9P2B4 639 aa23.1■■□□□ 1.29
KCNMA1-209ENST00000372443 DNM3Q9UQ16 869 aa23.1■■□□□ 1.29
KCNMA1-209ENST00000372443 PTCH1Q13635 1447 aa23.1■■□□□ 1.29
KCNMA1-209ENST00000372443 HARSP12081 509 aaKnown RBP23.1■■□□□ 1.29
KCNMA1-209ENST00000372443 PEX26Q7Z412 305 aa23.1■■□□□ 1.29
KCNMA1-209ENST00000372443 CEP63Q96MT8 703 aa23.1■■□□□ 1.29
KCNMA1-209ENST00000372443 GGA1Q9UJY5 639 aa23.1■■□□□ 1.29
KCNMA1-209ENST00000372443 PRR36Q9H6K5 1346 aa23.09■■□□□ 1.29
KCNMA1-209ENST00000372443 CCDC169A6NNP5 214 aa23.09■■□□□ 1.29
KCNMA1-209ENST00000372443 CALUO43852 315 aaPredicted RBP23.09■■□□□ 1.29
KCNMA1-209ENST00000372443 FLOT1O75955 427 aa23.09■■□□□ 1.29
KCNMA1-209ENST00000372443 TECP42680 631 aa23.09■■□□□ 1.29
KCNMA1-209ENST00000372443 DNM2P50570 870 aa23.09■■□□□ 1.29
KCNMA1-209ENST00000372443 CASP14P31944 242 aa23.09■■□□□ 1.29
KCNMA1-209ENST00000372443 MRRFQ96E11 262 aaKnown RBP23.09■■□□□ 1.29
KCNMA1-209ENST00000372443 CABS1Q96KC9 395 aa23.09■■□□□ 1.29
KCNMA1-209ENST00000372443 TSNARE1Q96NA8 513 aa23.09■■□□□ 1.29
KCNMA1-209ENST00000372443 PDE8BO95263 885 aa23.09■■□□□ 1.29
KCNMA1-209ENST00000372443 RPS8P62241 208 aaKnown RBP23.09■■□□□ 1.29
KCNMA1-209ENST00000372443 SETDB1Q15047 1291 aa23.09■■□□□ 1.29
KCNMA1-209ENST00000372443 RUFY4Q6ZNE9 571 aa23.09■■□□□ 1.29
KCNMA1-209ENST00000372443 PNMA1Q8ND90 353 aa23.09■■□□□ 1.29
KCNMA1-209ENST00000372443 CSRNP2Q9H175 543 aa23.09■■□□□ 1.29
KCNMA1-209ENST00000372443 USP6P35125 1406 aa23.09■■□□□ 1.29
KCNMA1-209ENST00000372443 M0R2C6 588 aa23.08■■□□□ 1.29
KCNMA1-209ENST00000372443 SCG2P13521 617 aa23.08■■□□□ 1.29
KCNMA1-209ENST00000372443 UBE3CQ15386 1083 aa23.08■■□□□ 1.29
KCNMA1-209ENST00000372443 RPGRIP1Q96KN7 1286 aa23.08■■□□□ 1.29
KCNMA1-209ENST00000372443 LZTS2Q9BRK4 669 aa23.08■■□□□ 1.29
KCNMA1-209ENST00000372443 EPN1Q9Y6I3 576 aaPredicted RBP23.08■■□□□ 1.29
KCNMA1-209ENST00000372443 CDC25BP30305 580 aa23.08■■□□□ 1.29
KCNMA1-209ENST00000372443 GUCY2FP51841 1108 aa23.08■■□□□ 1.29
KCNMA1-209ENST00000372443 ZYXQ15942 572 aaKnown RBP23.08■■□□□ 1.29
KCNMA1-209ENST00000372443 PTPROQ16827 1216 aa23.08■■□□□ 1.29
KCNMA1-209ENST00000372443 TRIM58Q8NG06 486 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms