RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 IL17RBQ9NRM6 502 aa23.51■■□□□ 1.35
VEGFA-204ENST00000372064 DACH1Q9UI36 760 aa23.51■■□□□ 1.35
VEGFA-204ENST00000372064 SERPINC1P01008 464 aa23.5■■□□□ 1.35
VEGFA-204ENST00000372064 DGKHQ86XP1 1220 aa23.5■■□□□ 1.35
VEGFA-204ENST00000372064 TGFBRAP1Q8WUH2 860 aa23.5■■□□□ 1.35
VEGFA-204ENST00000372064 A0A087X0B3 334 aa23.49■■□□□ 1.35
VEGFA-204ENST00000372064 UFL1O94874 794 aa23.49■■□□□ 1.35
VEGFA-204ENST00000372064 SERPINB2P05120 415 aa23.49■■□□□ 1.35
VEGFA-204ENST00000372064 PPP4CP60510 307 aa23.49■■□□□ 1.35
VEGFA-204ENST00000372064 GSTO1P78417 241 aa23.49■■□□□ 1.35
VEGFA-204ENST00000372064 BAG3O95817 575 aa23.49■■□□□ 1.35
VEGFA-204ENST00000372064 KIF5BP33176 963 aa23.49■■□□□ 1.35
VEGFA-204ENST00000372064 PTPN14Q15678 1187 aa23.49■■□□□ 1.35
VEGFA-204ENST00000372064 ZNF174Q15697 407 aa23.49■■□□□ 1.35
VEGFA-204ENST00000372064 CRY2Q49AN0 593 aa23.49■■□□□ 1.35
VEGFA-204ENST00000372064 TTC38Q5R3I4 469 aa23.49■■□□□ 1.35
VEGFA-204ENST00000372064 SH3RF1Q7Z6J0 888 aa23.49■■□□□ 1.35
VEGFA-204ENST00000372064 VSTM4Q8IW00 320 aa23.49■■□□□ 1.35
VEGFA-204ENST00000372064 ENOX1Q8TC92 643 aaKnown RBP23.49■■□□□ 1.35
VEGFA-204ENST00000372064 KAT14Q9H8E8 782 aa23.49■■□□□ 1.35
VEGFA-204ENST00000372064 TRAPPC10P48553 1259 aa23.49■■□□□ 1.35
VEGFA-204ENST00000372064 ATP2C1P98194 919 aaPredicted RBP23.49■■□□□ 1.35
VEGFA-204ENST00000372064 E4F1Q66K89 784 aaPredicted RBP23.49■■□□□ 1.35
VEGFA-204ENST00000372064 CERKQ8TCT0 537 aa23.49■■□□□ 1.35
VEGFA-204ENST00000372064 EPSTI1Q96J88 318 aa23.49■■□□□ 1.35
VEGFA-204ENST00000372064 CD209Q9NNX6 404 aa23.49■■□□□ 1.35
VEGFA-204ENST00000372064 SLC44A5Q8NCS7 719 aa23.48■■□□□ 1.35
VEGFA-204ENST00000372064 MKNK2Q9HBH9 465 aa23.48■■□□□ 1.35
VEGFA-204ENST00000372064 NAV1Q8NEY1 1877 aa23.48■■□□□ 1.35
VEGFA-204ENST00000372064 SLFN14P0C7P3 912 aa23.48■■□□□ 1.35
VEGFA-204ENST00000372064 ZNF18P17022 549 aa23.48■■□□□ 1.35
VEGFA-204ENST00000372064 NLRP5P59047 1200 aa23.48■■□□□ 1.35
VEGFA-204ENST00000372064 FMR1Q06787 632 aaKnown RBP eCLIP23.48■■□□□ 1.35
VEGFA-204ENST00000372064 SYMPKQ92797 1274 aaKnown RBP23.48■■□□□ 1.35
VEGFA-204ENST00000372064 ADAMTS3O15072 1205 aa23.47■■□□□ 1.35
VEGFA-204ENST00000372064 ZNF827Q17R98 1081 aa23.47■■□□□ 1.35
VEGFA-204ENST00000372064 CFAP100Q494V2 611 aa23.47■■□□□ 1.35
VEGFA-204ENST00000372064 MAPKAPK5Q8IW41 473 aa23.47■■□□□ 1.35
VEGFA-204ENST00000372064 PNMA1Q8ND90 353 aa23.47■■□□□ 1.35
VEGFA-204ENST00000372064 PSDA5PKW4 1024 aaPredicted RBP23.47■■□□□ 1.35
VEGFA-204ENST00000372064 USP17L3A6NCW0 530 aa23.47■■□□□ 1.35
VEGFA-204ENST00000372064 USP17L4A6NCW7 530 aa23.47■■□□□ 1.35
VEGFA-204ENST00000372064 PLCD1P51178 756 aa23.47■■□□□ 1.35
VEGFA-204ENST00000372064 ST5P78524 1137 aa23.47■■□□□ 1.35
VEGFA-204ENST00000372064 USP17L1Q7RTZ2 530 aa23.47■■□□□ 1.35
VEGFA-204ENST00000372064 CCDC34Q96HJ3 373 aa23.47■■□□□ 1.35
VEGFA-204ENST00000372064 RTFDC1Q9BY42 306 aaPredicted RBP23.47■■□□□ 1.35
VEGFA-204ENST00000372064 TCP11L1Q9NUJ3 509 aa23.47■■□□□ 1.35
VEGFA-204ENST00000372064 LDHCP07864 332 aa23.46■■□□□ 1.35
VEGFA-204ENST00000372064 CT47A1Q5JQC4 288 aaPredicted RBP23.46■■□□□ 1.35
VEGFA-204ENST00000372064 STAG2Q8N3U4 1231 aa23.46■■□□□ 1.35
VEGFA-204ENST00000372064 DHX58Q96C10 678 aa23.46■■□□□ 1.35
VEGFA-204ENST00000372064 INTS13Q9NVM9 706 aa23.46■■□□□ 1.35
VEGFA-204ENST00000372064 SAP30BPQ9UHR5 308 aaKnown RBP23.46■■□□□ 1.35
VEGFA-204ENST00000372064 SYCP1Q15431 976 aa23.46■■□□□ 1.35
VEGFA-204ENST00000372064 ANKRD7Q92527 254 aa23.46■■□□□ 1.35
VEGFA-204ENST00000372064 TRMT1Q9NXH9 659 aaKnown RBP23.46■■□□□ 1.35
VEGFA-204ENST00000372064 GGA1Q9UJY5 639 aa23.46■■□□□ 1.35
VEGFA-204ENST00000372064 TRPC5Q9UL62 973 aaPredicted RBP23.46■■□□□ 1.35
VEGFA-204ENST00000372064 EP400Q96L91 3159 aa23.46■■□□□ 1.35
VEGFA-204ENST00000372064 ATP2B4P23634 1241 aa23.46■■□□□ 1.35
VEGFA-204ENST00000372064 CCDC178Q5BJE1 867 aa23.46■■□□□ 1.35
VEGFA-204ENST00000372064 PIK3AP1Q6ZUJ8 805 aa23.46■■□□□ 1.35
VEGFA-204ENST00000372064 TMX1Q9H3N1 280 aa23.46■■□□□ 1.35
VEGFA-204ENST00000372064 SH3GLB2Q9NR46 395 aa23.46■■□□□ 1.35
VEGFA-204ENST00000372064 NRDCO43847 1150 aa23.45■■□□□ 1.34
VEGFA-204ENST00000372064 ERCC5P28715 1186 aaPredicted RBP23.45■■□□□ 1.34
VEGFA-204ENST00000372064 AMOTL1Q8IY63 956 aa23.45■■□□□ 1.34
VEGFA-204ENST00000372064 CCDC112Q8NEF3 446 aa23.45■■□□□ 1.34
VEGFA-204ENST00000372064 PAGE5Q96GU1 130 aa23.45■■□□□ 1.34
VEGFA-204ENST00000372064 MED15Q96RN5 788 aa23.45■■□□□ 1.34
VEGFA-204ENST00000372064 KIF2AO00139 706 aaPredicted RBP23.45■■□□□ 1.34
VEGFA-204ENST00000372064 BTDP43251 543 aa23.45■■□□□ 1.34
VEGFA-204ENST00000372064 PTGDRQ13258 359 aa23.45■■□□□ 1.34
VEGFA-204ENST00000372064 RBM17Q96I25 401 aaKnown RBP23.45■■□□□ 1.34
VEGFA-204ENST00000372064 NFE2L3Q9Y4A8 694 aa23.45■■□□□ 1.34
VEGFA-204ENST00000372064 UBR3Q6ZT12 1888 aa23.45■■□□□ 1.34
VEGFA-204ENST00000372064 TSPY3P0CV98 308 aa23.44■■□□□ 1.34
VEGFA-204ENST00000372064 TSPY8P0CW00 308 aa23.44■■□□□ 1.34
VEGFA-204ENST00000372064 GRM4Q14833 912 aa23.44■■□□□ 1.34
VEGFA-204ENST00000372064 TMEM232C9JQI7 657 aa23.44■■□□□ 1.34
VEGFA-204ENST00000372064 ZNF444Q8N0Y2 327 aaPredicted RBP23.44■■□□□ 1.34
VEGFA-204ENST00000372064 DDX60LQ5H9U9 1706 aaKnown RBP23.44■■□□□ 1.34
VEGFA-204ENST00000372064 CALML3P27482 149 aa23.43■■□□□ 1.34
VEGFA-204ENST00000372064 CERS3Q8IU89 383 aa23.43■■□□□ 1.34
VEGFA-204ENST00000372064 GPKOWQ92917 476 aaPredicted RBP eCLIP23.43■■□□□ 1.349e-7■□□□□ 11
VEGFA-204ENST00000372064 PPP1R13BQ96KQ4 1090 aa23.43■■□□□ 1.34
VEGFA-204ENST00000372064 IL1R1P14778 569 aa23.43■■□□□ 1.34
VEGFA-204ENST00000372064 DDR1Q08345 913 aa23.43■■□□□ 1.34
VEGFA-204ENST00000372064 DPYDQ12882 1025 aa23.43■■□□□ 1.34
VEGFA-204ENST00000372064 MTMR7Q9Y216 660 aa23.43■■□□□ 1.34
VEGFA-204ENST00000372064 VWA3AA6NCI4 1184 aa23.43■■□□□ 1.34
VEGFA-204ENST00000372064 HSP90AA4PQ58FG1 418 aa23.43■■□□□ 1.34
VEGFA-204ENST00000372064 POLLQ9UGP5 575 aa23.43■■□□□ 1.34
VEGFA-204ENST00000372064 MAD2L2Q9UI95 211 aa23.43■■□□□ 1.34
VEGFA-204ENST00000372064 CDK5RAP2Q96SN8 1893 aa23.42■■□□□ 1.34
VEGFA-204ENST00000372064 TOP1P11387 765 aaKnown RBP23.42■■□□□ 1.34
VEGFA-204ENST00000372064 AFMP43652 599 aa23.42■■□□□ 1.34
VEGFA-204ENST00000372064 TBX2Q13207 712 aaPredicted RBP23.42■■□□□ 1.34
VEGFA-204ENST00000372064 RASA1P20936 1047 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms