RNA–Protein interactions for RNA: ENST00000371750.9

TTC39A-204, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39A, Length 2,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-204ENST00000371750 ZNF280CQ8ND82 737 aa15.33■□□□□ 0.04
TTC39A-204ENST00000371750 CHMP4CQ96CF2 233 aa15.33■□□□□ 0.04
TTC39A-204ENST00000371750 WNK4Q96J92 1243 aa15.33■□□□□ 0.04
TTC39A-204ENST00000371750 WDR18Q9BV38 432 aa15.33■□□□□ 0.04
TTC39A-204ENST00000371750 TMX2Q9Y320 296 aa15.33■□□□□ 0.04
TTC39A-204ENST00000371750 AFG3L2Q9Y4W6 797 aa15.33■□□□□ 0.04
TTC39A-204ENST00000371750 LARGE1O95461 756 aa15.32■□□□□ 0.04
TTC39A-204ENST00000371750 RXRAP19793 462 aa15.32■□□□□ 0.04
TTC39A-204ENST00000371750 PPIL2Q13356 520 aa15.32■□□□□ 0.04
TTC39A-204ENST00000371750 APOA5Q6Q788 366 aa15.32■□□□□ 0.04
TTC39A-204ENST00000371750 MKL1Q969V6 931 aa15.32■□□□□ 0.04
TTC39A-204ENST00000371750 SLC10A4Q96EP9 437 aa15.32■□□□□ 0.04
TTC39A-204ENST00000371750 TPCN1Q9ULQ1 816 aa15.32■□□□□ 0.04
TTC39A-204ENST00000371750 NAP1L2Q9ULW6 460 aaPredicted RBP15.32■□□□□ 0.04
TTC39A-204ENST00000371750 GOLGA8BA8MQT2 603 aa15.31■□□□□ 0.04
TTC39A-204ENST00000371750 IRF6O14896 467 aa15.31■□□□□ 0.04
TTC39A-204ENST00000371750 RAD21O60216 631 aa15.31■□□□□ 0.04
TTC39A-204ENST00000371750 APLP1P51693 650 aa15.31■□□□□ 0.04
TTC39A-204ENST00000371750 MKRN3Q13064 507 aaKnown RBP15.31■□□□□ 0.04
TTC39A-204ENST00000371750 ANKRD1Q15327 319 aa15.31■□□□□ 0.04
TTC39A-204ENST00000371750 KIAA1755Q5JYT7 1200 aa15.31■□□□□ 0.04
TTC39A-204ENST00000371750 MICU3Q86XE3 530 aa15.31■□□□□ 0.04
TTC39A-204ENST00000371750 RASAL3Q86YV0 1011 aa15.31■□□□□ 0.04
TTC39A-204ENST00000371750 TBC1D2Q9BYX2 928 aa15.31■□□□□ 0.04
TTC39A-204ENST00000371750 SH2D4AQ9H788 454 aa15.31■□□□□ 0.04
TTC39A-204ENST00000371750 SLC12A7Q9Y666 1083 aa15.31■□□□□ 0.04
TTC39A-204ENST00000371750 USP17L10C9JJH3 530 aa15.31■□□□□ 0.04
TTC39A-204ENST00000371750 KIAA1683Q9H0B3 1180 aa15.31■□□□□ 0.04
TTC39A-204ENST00000371750 VCPKMTQ9H867 229 aa15.31■□□□□ 0.04
TTC39A-204ENST00000371750 DDAH1O94760 285 aa15.3■□□□□ 0.04
TTC39A-204ENST00000371750 NDUFB10O96000 172 aa15.3■□□□□ 0.04
TTC39A-204ENST00000371750 ZNF157P51786 506 aaPredicted RBP15.3■□□□□ 0.04
TTC39A-204ENST00000371750 HMGCS2P54868 508 aa15.3■□□□□ 0.04
TTC39A-204ENST00000371750 BACE1P56817 501 aa15.3■□□□□ 0.04
TTC39A-204ENST00000371750 RGMBQ6NW40 437 aa15.3■□□□□ 0.04
TTC39A-204ENST00000371750 CATIPQ7Z7H3 387 aa15.3■□□□□ 0.04
TTC39A-204ENST00000371750 CCDC144CPQ8IYA2 1237 aa15.3■□□□□ 0.04
TTC39A-204ENST00000371750 SPICE1Q8N0Z3 855 aa15.3■□□□□ 0.04
TTC39A-204ENST00000371750 TMTC2Q8N394 836 aa15.3■□□□□ 0.04
TTC39A-204ENST00000371750 NUP133Q8WUM0 1156 aa15.3■□□□□ 0.04
TTC39A-204ENST00000371750 SYNPO2Q9UMS6 1093 aa15.3■□□□□ 0.04
TTC39A-204ENST00000371750 EVCP57679 992 aa15.29■□□□□ 0.04
TTC39A-204ENST00000371750 TROAPQ12815 778 aa15.29■□□□□ 0.04
TTC39A-204ENST00000371750 GMCL1P1Q8NEA9 526 aa15.29■□□□□ 0.04
TTC39A-204ENST00000371750 GOPCQ9HD26 462 aa15.29■□□□□ 0.04
TTC39A-204ENST00000371750 CREBZFQ9NS37 354 aa15.29■□□□□ 0.04
TTC39A-204ENST00000371750 HPS5Q9UPZ3 1129 aa15.29■□□□□ 0.04
TTC39A-204ENST00000371750 KCNH4Q9UQ05 1017 aa15.29■□□□□ 0.04
TTC39A-204ENST00000371750 NID2Q14112 1375 aa15.29■□□□□ 0.04
TTC39A-204ENST00000371750 GOLGA8AA7E2F4 631 aa15.29■□□□□ 0.04
TTC39A-204ENST00000371750 F5H6K3 240 aa15.29■□□□□ 0.04
TTC39A-204ENST00000371750 ZBTB43O43298 467 aa15.29■□□□□ 0.04
TTC39A-204ENST00000371750 PDHBP11177 359 aa15.29■□□□□ 0.04
TTC39A-204ENST00000371750 KLRC3Q07444 240 aa15.29■□□□□ 0.04
TTC39A-204ENST00000371750 STK3Q13188 491 aa15.29■□□□□ 0.04
TTC39A-204ENST00000371750 ME3Q16798 604 aa15.29■□□□□ 0.04
TTC39A-204ENST00000371750 SPRYD7Q5W111 196 aa15.29■□□□□ 0.04
TTC39A-204ENST00000371750 SLFN13Q68D06 897 aa15.29■□□□□ 0.04
TTC39A-204ENST00000371750 NUP88Q99567 741 aaPredicted RBP15.29■□□□□ 0.04
TTC39A-204ENST00000371750 EMILIN3Q9NT22 766 aa15.29■□□□□ 0.04
TTC39A-204ENST00000371750 SLC10A3P09131 477 aa15.28■□□□□ 0.04
TTC39A-204ENST00000371750 PDIA3P30101 505 aaKnown RBP15.28■□□□□ 0.04
TTC39A-204ENST00000371750 LIMCH1Q9UPQ0 1083 aa15.28■□□□□ 0.04
TTC39A-204ENST00000371750 FRMPD2Q68DX3 1309 aaPredicted RBP15.28■□□□□ 0.04
TTC39A-204ENST00000371750 PARP14Q460N5 1801 aa15.28■□□□□ 0.04
TTC39A-204ENST00000371750 A0A0G2JLL6 359 aaPredicted RBP15.27■□□□□ 0.04
TTC39A-204ENST00000371750 SNHG28P0DPA3 235 aa15.27■□□□□ 0.04
TTC39A-204ENST00000371750 VCAM1P19320 739 aa15.27■□□□□ 0.04
TTC39A-204ENST00000371750 METAP2P50579 478 aaKnown RBP eCLIP15.27■□□□□ 0.04
TTC39A-204ENST00000371750 USP14P54578 494 aa15.27■□□□□ 0.04
TTC39A-204ENST00000371750 ST3GAL1Q11201 340 aa15.27■□□□□ 0.04
TTC39A-204ENST00000371750 GRM4Q14833 912 aa15.27■□□□□ 0.04
TTC39A-204ENST00000371750 CCDC96Q2M329 555 aa15.27■□□□□ 0.04
TTC39A-204ENST00000371750 SH3D19Q5HYK7 790 aa15.27■□□□□ 0.04
TTC39A-204ENST00000371750 USP17L2Q6R6M4 530 aa15.27■□□□□ 0.04
TTC39A-204ENST00000371750 SYNE3Q6ZMZ3 975 aa15.27■□□□□ 0.04
TTC39A-204ENST00000371750 PAXIP1Q6ZW49 1069 aaPredicted RBP15.27■□□□□ 0.04
TTC39A-204ENST00000371750 PRRT2Q7Z6L0 340 aaPredicted RBP15.27■□□□□ 0.04
TTC39A-204ENST00000371750 IL27Q8NEV9 243 aa15.27■□□□□ 0.04
TTC39A-204ENST00000371750 CXCL11O14625 94 aa15.27■□□□□ 0.03
TTC39A-204ENST00000371750 GOLGA8HP0CJ92 632 aa15.27■□□□□ 0.03
TTC39A-204ENST00000371750 ZBTB48P10074 688 aaPredicted RBP15.27■□□□□ 0.03
TTC39A-204ENST00000371750 CCT2P78371 535 aaKnown RBP15.27■□□□□ 0.03
TTC39A-204ENST00000371750 HTRA3P83110 453 aa15.27■□□□□ 0.03
TTC39A-204ENST00000371750 FAM83BQ5T0W9 1011 aa15.27■□□□□ 0.03
TTC39A-204ENST00000371750 SNX21Q969T3 373 aa15.27■□□□□ 0.03
TTC39A-204ENST00000371750 ZNF274Q96GC6 653 aaPredicted RBP15.27■□□□□ 0.03
TTC39A-204ENST00000371750 GMCL1Q96IK5 515 aa15.27■□□□□ 0.03
TTC39A-204ENST00000371750 HHIPL1Q96JK4 782 aa15.27■□□□□ 0.03
TTC39A-204ENST00000371750 C12orf42Q96LP6 360 aa15.27■□□□□ 0.03
TTC39A-204ENST00000371750 NCOA5Q9HCD5 579 aaKnown RBP15.27■□□□□ 0.03
TTC39A-204ENST00000371750 ISY1Q9ULR0 285 aaKnown RBP15.27■□□□□ 0.03
TTC39A-204ENST00000371750 FAM155AB1AL88 458 aaPredicted RBP15.26■□□□□ 0.03
TTC39A-204ENST00000371750 C19orf81C9J6K1 198 aa15.26■□□□□ 0.03
TTC39A-204ENST00000371750 CALM1P0DP23 149 aa15.26■□□□□ 0.03
TTC39A-204ENST00000371750 CALM2P0DP24 149 aa15.26■□□□□ 0.03
TTC39A-204ENST00000371750 CALM3P0DP25 149 aa15.26■□□□□ 0.03
TTC39A-204ENST00000371750 SLC1A4P43007 532 aa15.26■□□□□ 0.03
TTC39A-204ENST00000371750 MCM2P49736 904 aa15.26■□□□□ 0.03
TTC39A-204ENST00000371750 RCAN1P53805 252 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms