RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 MKL1Q969V6 931 aa18.77■□□□□ 0.6
PFDN4-201ENST00000371419 STX8Q9UNK0 236 aa18.77■□□□□ 0.6
PFDN4-201ENST00000371419 PABPC4Q13310 644 aaKnown RBP eCLIP18.77■□□□□ 0.599e-8■■■□□ 18.6
PFDN4-201ENST00000371419 TAF1CQ15572 869 aaPredicted RBP18.77■□□□□ 0.59
PFDN4-201ENST00000371419 IQCA1Q86XH1 822 aa18.77■□□□□ 0.59
PFDN4-201ENST00000371419 VCPKMTQ9H867 229 aa18.77■□□□□ 0.59
PFDN4-201ENST00000371419 GOPCQ9HD26 462 aa18.77■□□□□ 0.59
PFDN4-201ENST00000371419 ZSWIM5Q9P217 1185 aa18.77■□□□□ 0.59
PFDN4-201ENST00000371419 SYNPO2Q9UMS6 1093 aa18.77■□□□□ 0.59
PFDN4-201ENST00000371419 ZKSCAN1P17029 563 aaPredicted RBP18.76■□□□□ 0.59
PFDN4-201ENST00000371419 VCAM1P19320 739 aa18.76■□□□□ 0.59
PFDN4-201ENST00000371419 NOVP48745 357 aa18.76■□□□□ 0.59
PFDN4-201ENST00000371419 CCDC178Q5BJE1 867 aa18.76■□□□□ 0.59
PFDN4-201ENST00000371419 LPAR1Q92633 364 aa18.76■□□□□ 0.59
PFDN4-201ENST00000371419 CFHR5Q9BXR6 569 aa18.76■□□□□ 0.59
PFDN4-201ENST00000371419 HOXA7P31268 230 aaPredicted RBP18.75■□□□□ 0.59
PFDN4-201ENST00000371419 HSPA4P34932 840 aa18.75■□□□□ 0.59
PFDN4-201ENST00000371419 TSGA10IPQ3SY00 556 aa18.75■□□□□ 0.59
PFDN4-201ENST00000371419 TTC14Q96N46 770 aa18.75■□□□□ 0.59
PFDN4-201ENST00000371419 PARK7Q99497 189 aaKnown RBP18.75■□□□□ 0.59
PFDN4-201ENST00000371419 ZKSCAN3Q9BRR0 538 aa18.75■□□□□ 0.59
PFDN4-201ENST00000371419 USP26Q9BXU7 913 aa18.75■□□□□ 0.59
PFDN4-201ENST00000371419 ZFYVE28Q9HCC9 887 aa18.75■□□□□ 0.59
PFDN4-201ENST00000371419 PNMA3Q9UL41 463 aa18.75■□□□□ 0.59
PFDN4-201ENST00000371419 TBC1D8O95759 1140 aa18.74■□□□□ 0.59
PFDN4-201ENST00000371419 CRHR2Q13324 411 aa18.74■□□□□ 0.59
PFDN4-201ENST00000371419 KIAA1755Q5JYT7 1200 aa18.74■□□□□ 0.59
PFDN4-201ENST00000371419 SPICE1Q8N0Z3 855 aa18.74■□□□□ 0.59
PFDN4-201ENST00000371419 LRRC47Q8N1G4 583 aaKnown RBP18.74■□□□□ 0.59
PFDN4-201ENST00000371419 KCNB2Q92953 911 aa18.74■□□□□ 0.59
PFDN4-201ENST00000371419 ZSCAN10Q96SZ4 725 aaPredicted RBP18.74■□□□□ 0.59
PFDN4-201ENST00000371419 UBAC1Q9BSL1 405 aa18.74■□□□□ 0.59
PFDN4-201ENST00000371419 MYH4Q9Y623 1939 aa18.73■□□□□ 0.59
PFDN4-201ENST00000371419 USP17L15C9J2P7 530 aa18.73■□□□□ 0.59
PFDN4-201ENST00000371419 USP17L13C9JLJ4 530 aa18.73■□□□□ 0.59
PFDN4-201ENST00000371419 USP17L11C9JVI0 530 aa18.73■□□□□ 0.59
PFDN4-201ENST00000371419 USP17L18D6R9N7 530 aa18.73■□□□□ 0.59
PFDN4-201ENST00000371419 USP17L22D6RA61 530 aa18.73■□□□□ 0.59
PFDN4-201ENST00000371419 USP17L17D6RBQ6 530 aa18.73■□□□□ 0.59
PFDN4-201ENST00000371419 USP17L19D6RCP7 530 aa18.73■□□□□ 0.59
PFDN4-201ENST00000371419 USP17L20D6RJB6 530 aa18.73■□□□□ 0.59
PFDN4-201ENST00000371419 F5H6K3 240 aa18.73■□□□□ 0.59
PFDN4-201ENST00000371419 FOXN1O15353 648 aa18.73■□□□□ 0.59
PFDN4-201ENST00000371419 RAD21O60216 631 aa18.73■□□□□ 0.59
PFDN4-201ENST00000371419 TOP1P11387 765 aaKnown RBP18.73■□□□□ 0.59
PFDN4-201ENST00000371419 OSBPP22059 807 aa18.73■□□□□ 0.59
PFDN4-201ENST00000371419 KLRC3Q07444 240 aa18.73■□□□□ 0.59
PFDN4-201ENST00000371419 USP17L24Q0WX57 530 aa18.73■□□□□ 0.59
PFDN4-201ENST00000371419 KRT32Q14532 448 aa18.73■□□□□ 0.59
PFDN4-201ENST00000371419 CYB5R4Q7L1T6 521 aa18.73■□□□□ 0.59
PFDN4-201ENST00000371419 DGKHQ86XP1 1220 aa18.73■□□□□ 0.59
PFDN4-201ENST00000371419 RASEFQ8IZ41 740 aa18.73■□□□□ 0.59
PFDN4-201ENST00000371419 GMCL1P1Q8NEA9 526 aa18.73■□□□□ 0.59
PFDN4-201ENST00000371419 RPAP3Q9H6T3 665 aaPredicted RBP18.73■□□□□ 0.59
PFDN4-201ENST00000371419 UPF2Q9HAU5 1272 aaKnown RBP18.73■□□□□ 0.59
PFDN4-201ENST00000371419 WDR46O15213 610 aaKnown RBP18.72■□□□□ 0.59
PFDN4-201ENST00000371419 CYP2C8P10632 490 aa18.72■□□□□ 0.59
PFDN4-201ENST00000371419 MCCP23508 829 aa18.72■□□□□ 0.59
PFDN4-201ENST00000371419 IRX3P78415 501 aaPredicted RBP18.72■□□□□ 0.59
PFDN4-201ENST00000371419 RCSD1Q6JBY9 416 aa18.72■□□□□ 0.59
PFDN4-201ENST00000371419 MB21D2Q8IYB1 491 aaPredicted RBP18.72■□□□□ 0.59
PFDN4-201ENST00000371419 TMEM47Q9BQJ4 181 aa18.72■□□□□ 0.59
PFDN4-201ENST00000371419 ASCC2Q9H1I8 757 aaPredicted RBP18.72■□□□□ 0.59
PFDN4-201ENST00000371419 TSKSQ9UJT2 592 aa18.72■□□□□ 0.59
PFDN4-201ENST00000371419 TNKSO95271 1327 aa18.72■□□□□ 0.59
PFDN4-201ENST00000371419 NDUFB10O96000 172 aa18.71■□□□□ 0.59
PFDN4-201ENST00000371419 CTCFP49711 727 aaPredicted RBP18.71■□□□□ 0.59
PFDN4-201ENST00000371419 CATSPERGQ6ZRH7 1159 aa18.71■□□□□ 0.59
PFDN4-201ENST00000371419 ENAHQ8N8S7 591 aaPredicted RBP18.71■□□□□ 0.59
PFDN4-201ENST00000371419 ANKS1AQ92625 1134 aa18.71■□□□□ 0.59
PFDN4-201ENST00000371419 R3HDMLQ9H3Y0 253 aa18.71■□□□□ 0.59
PFDN4-201ENST00000371419 TLR2O60603 784 aa18.71■□□□□ 0.59
PFDN4-201ENST00000371419 MCM5P33992 734 aa18.71■□□□□ 0.59
PFDN4-201ENST00000371419 SART3Q15020 963 aaKnown RBP18.71■□□□□ 0.59
PFDN4-201ENST00000371419 SLFN13Q68D06 897 aa18.71■□□□□ 0.59
PFDN4-201ENST00000371419 SMCR8Q8TEV9 937 aaPredicted RBP18.71■□□□□ 0.59
PFDN4-201ENST00000371419 NEK1Q96PY6 1258 aa18.71■□□□□ 0.59
PFDN4-201ENST00000371419 TANGO6Q9C0B7 1094 aa18.71■□□□□ 0.59
PFDN4-201ENST00000371419 SNX14Q9Y5W7 946 aa18.71■□□□□ 0.59
PFDN4-201ENST00000371419 ERICH2A1L162 156 aa18.7■□□□□ 0.58
PFDN4-201ENST00000371419 IFIT3O14879 490 aaKnown RBP18.7■□□□□ 0.58
PFDN4-201ENST00000371419 HSPA8P11142 646 aaKnown RBP18.7■□□□□ 0.58
PFDN4-201ENST00000371419 ANTXR2P58335 489 aa18.7■□□□□ 0.58
PFDN4-201ENST00000371419 NOM1Q5C9Z4 860 aaKnown RBP18.7■□□□□ 0.58
PFDN4-201ENST00000371419 CHST3Q7LGC8 479 aa18.7■□□□□ 0.58
PFDN4-201ENST00000371419 P2RX7Q99572 595 aaKnown RBP18.7■□□□□ 0.58
PFDN4-201ENST00000371419 ADGRA2Q96PE1 1338 aa18.69■□□□□ 0.58
PFDN4-201ENST00000371419 PRC1O43663 620 aa18.69■□□□□ 0.58
PFDN4-201ENST00000371419 SEC24BO95487 1268 aa18.69■□□□□ 0.58
PFDN4-201ENST00000371419 SEC23AQ15436 765 aa18.69■□□□□ 0.58
PFDN4-201ENST00000371419 ADCK5Q3MIX3 580 aa18.69■□□□□ 0.58
PFDN4-201ENST00000371419 FAM83BQ5T0W9 1011 aa18.69■□□□□ 0.58
PFDN4-201ENST00000371419 IFIT1BQ5T764 474 aaKnown RBP18.69■□□□□ 0.58
PFDN4-201ENST00000371419 GMCL1Q96IK5 515 aa18.69■□□□□ 0.58
PFDN4-201ENST00000371419 NUP88Q99567 741 aaPredicted RBP18.69■□□□□ 0.58
PFDN4-201ENST00000371419 MTA3Q9BTC8 594 aa18.69■□□□□ 0.58
PFDN4-201ENST00000371419 KAT14Q9H8E8 782 aa18.69■□□□□ 0.58
PFDN4-201ENST00000371419 GPR25O00155 361 aa18.68■□□□□ 0.58
PFDN4-201ENST00000371419 HMGB1P09429 215 aaKnown RBP18.68■□□□□ 0.58
PFDN4-201ENST00000371419 GCLCP48506 637 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms