RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 CCDC129Q6ZRS4 1044 aa13.19□□□□□ -0.3
EXOSC1-202ENST00000370885 SPICE1Q8N0Z3 855 aa13.19□□□□□ -0.3
EXOSC1-202ENST00000370885 EXOC6Q8TAG9 804 aa13.19□□□□□ -0.3
EXOSC1-202ENST00000370885 GPATCH3Q96I76 525 aa13.19□□□□□ -0.3
EXOSC1-202ENST00000370885 DEFB118Q96PH6 123 aa13.19□□□□□ -0.3
EXOSC1-202ENST00000370885 CRISPLD2Q9H0B8 497 aa13.19□□□□□ -0.3
EXOSC1-202ENST00000370885 TMX2Q9Y320 296 aa13.19□□□□□ -0.3
EXOSC1-202ENST00000370885 TACC3Q9Y6A5 838 aa13.19□□□□□ -0.3
EXOSC1-202ENST00000370885 DNAH12Q6ZR08 3092 aa13.19□□□□□ -0.3
EXOSC1-202ENST00000370885 GLRX3O76003 335 aaKnown RBP13.18□□□□□ -0.3
EXOSC1-202ENST00000370885 EEF2P13639 858 aaKnown RBP13.18□□□□□ -0.3
EXOSC1-202ENST00000370885 ICA1Q05084 483 aa13.18□□□□□ -0.3
EXOSC1-202ENST00000370885 ZMYM1Q5SVZ6 1142 aa13.18□□□□□ -0.3
EXOSC1-202ENST00000370885 MAP3K21Q5TCX8 1036 aa13.18□□□□□ -0.3
EXOSC1-202ENST00000370885 PLEKHH3Q7Z736 793 aa13.18□□□□□ -0.3
EXOSC1-202ENST00000370885 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.18□□□□□ -0.3
EXOSC1-202ENST00000370885 FLRT1Q9NZU1 646 aa13.18□□□□□ -0.3
EXOSC1-202ENST00000370885 STAP2Q9UGK3 403 aa13.18□□□□□ -0.3
EXOSC1-202ENST00000370885 ROBO3Q96MS0 1386 aa13.18□□□□□ -0.3
EXOSC1-202ENST00000370885 MINDY4BA8MYZ0 360 aa13.17□□□□□ -0.3
EXOSC1-202ENST00000370885 PRDM1O75626 825 aa13.17□□□□□ -0.3
EXOSC1-202ENST00000370885 HMGCRP04035 888 aa13.17□□□□□ -0.3
EXOSC1-202ENST00000370885 ZFYP08048 801 aaPredicted RBP13.17□□□□□ -0.3
EXOSC1-202ENST00000370885 MAPK4P31152 587 aa13.17□□□□□ -0.3
EXOSC1-202ENST00000370885 PDE1AP54750 535 aa13.17□□□□□ -0.3
EXOSC1-202ENST00000370885 COG2Q14746 738 aa13.17□□□□□ -0.3
EXOSC1-202ENST00000370885 GIMAP6Q6P9H5 292 aa13.17□□□□□ -0.3
EXOSC1-202ENST00000370885 IFNL3Q8IZI9 196 aa13.17□□□□□ -0.3
EXOSC1-202ENST00000370885 NPLOC4Q8TAT6 608 aa13.17□□□□□ -0.3
EXOSC1-202ENST00000370885 DIS3LQ8TF46 1054 aaKnown RBP13.17□□□□□ -0.3
EXOSC1-202ENST00000370885 ATG4CQ96DT6 458 aa13.17□□□□□ -0.3
EXOSC1-202ENST00000370885 CCDC17Q96LX7 622 aa13.17□□□□□ -0.3
EXOSC1-202ENST00000370885 NUDT12Q9BQG2 462 aa13.17□□□□□ -0.3
EXOSC1-202ENST00000370885 VCPKMTQ9H867 229 aa13.17□□□□□ -0.3
EXOSC1-202ENST00000370885 INCENPQ9NQS7 918 aa13.17□□□□□ -0.3
EXOSC1-202ENST00000370885 FBXO28Q9NVF7 368 aa13.17□□□□□ -0.3
EXOSC1-202ENST00000370885 ARPP21Q9UBL0 812 aaPredicted RBP13.17□□□□□ -0.3
EXOSC1-202ENST00000370885 ALPK3Q96L96 1907 aa13.17□□□□□ -0.3
EXOSC1-202ENST00000370885 COL11A1P12107 1806 aaPredicted RBP13.16□□□□□ -0.3
EXOSC1-202ENST00000370885 IGKV6D-41A0A0C4DH26 115 aa13.16□□□□□ -0.3
EXOSC1-202ENST00000370885 PATL2C9JE40 543 aaKnown RBP13.16□□□□□ -0.3
EXOSC1-202ENST00000370885 H0YGN5 161 aa13.16□□□□□ -0.3
EXOSC1-202ENST00000370885 ERC2O15083 957 aa13.16□□□□□ -0.3
EXOSC1-202ENST00000370885 SLC34A2O95436 690 aa13.16□□□□□ -0.3
EXOSC1-202ENST00000370885 IGHA2P01877 340 aa13.16□□□□□ -0.3
EXOSC1-202ENST00000370885 XRCC5P13010 732 aaKnown RBP13.16□□□□□ -0.3
EXOSC1-202ENST00000370885 PTPREP23469 700 aa13.16□□□□□ -0.3
EXOSC1-202ENST00000370885 DSG3P32926 999 aa13.16□□□□□ -0.3
EXOSC1-202ENST00000370885 CACNB2Q08289 660 aaPredicted RBP13.16□□□□□ -0.3
EXOSC1-202ENST00000370885 VPS53Q5VIR6 699 aa13.16□□□□□ -0.3
EXOSC1-202ENST00000370885 GTF3C2Q8WUA4 911 aaPredicted RBP13.16□□□□□ -0.3
EXOSC1-202ENST00000370885 FSD1Q9BTV5 496 aa13.16□□□□□ -0.3
EXOSC1-202ENST00000370885 MOV10L1Q9BXT6 1211 aaKnown RBP13.16□□□□□ -0.3
EXOSC1-202ENST00000370885 TANGO6Q9C0B7 1094 aa13.16□□□□□ -0.3
EXOSC1-202ENST00000370885 FARP2O94887 1054 aaPredicted RBP13.15□□□□□ -0.3
EXOSC1-202ENST00000370885 CCND3P30281 292 aaPredicted RBP13.15□□□□□ -0.3
EXOSC1-202ENST00000370885 ATP2B2Q01814 1243 aa13.15□□□□□ -0.3
EXOSC1-202ENST00000370885 MAP2K5Q13163 448 aa13.15□□□□□ -0.3
EXOSC1-202ENST00000370885 SMC5Q8IY18 1101 aa13.15□□□□□ -0.3
EXOSC1-202ENST00000370885 NKX2-3Q8TAU0 364 aa13.15□□□□□ -0.3
EXOSC1-202ENST00000370885 GCC1Q96CN9 775 aa13.15□□□□□ -0.3
EXOSC1-202ENST00000370885 NUP88Q99567 741 aaPredicted RBP13.15□□□□□ -0.3
EXOSC1-202ENST00000370885 LNPKQ9C0E8 428 aa13.15□□□□□ -0.3
EXOSC1-202ENST00000370885 KANSL2Q9H9L4 492 aa13.15□□□□□ -0.3
EXOSC1-202ENST00000370885 ARHGEF10LQ9HCE6 1279 aa13.15□□□□□ -0.3
EXOSC1-202ENST00000370885 ADAMTS5Q9UNA0 930 aa13.15□□□□□ -0.3
EXOSC1-202ENST00000370885 RPTORQ8N122 1335 aa13.14□□□□□ -0.31
EXOSC1-202ENST00000370885 FLOT1O75955 427 aa13.14□□□□□ -0.31
EXOSC1-202ENST00000370885 TFRCP02786 760 aaKnown RBP13.14□□□□□ -0.31
EXOSC1-202ENST00000370885 APPP05067 770 aa13.14□□□□□ -0.31
EXOSC1-202ENST00000370885 PRKAR2AP13861 404 aaKnown RBP13.14□□□□□ -0.31
EXOSC1-202ENST00000370885 GRB14Q14449 540 aa13.14□□□□□ -0.31
EXOSC1-202ENST00000370885 TMEM132BQ14DG7 1078 aa13.14□□□□□ -0.31
EXOSC1-202ENST00000370885 B4GALNT3Q6L9W6 998 aa13.14□□□□□ -0.31
EXOSC1-202ENST00000370885 SOCS4Q8WXH5 440 aa13.14□□□□□ -0.31
EXOSC1-202ENST00000370885 LPAR1Q92633 364 aa13.14□□□□□ -0.31
EXOSC1-202ENST00000370885 DDRGK1Q96HY6 314 aa13.14□□□□□ -0.31
EXOSC1-202ENST00000370885 FAM227BQ96M60 508 aa13.14□□□□□ -0.31
EXOSC1-202ENST00000370885 SPATC1LQ9H0A9 340 aa13.14□□□□□ -0.31
EXOSC1-202ENST00000370885 HOXC10Q9NYD6 342 aa13.14□□□□□ -0.31
EXOSC1-202ENST00000370885 PCDH10Q9P2E7 1040 aa13.14□□□□□ -0.31
EXOSC1-202ENST00000370885 SZT2Q5T011 3432 aa13.13□□□□□ -0.31
EXOSC1-202ENST00000370885 SLC15A5A6NIM6 579 aa13.13□□□□□ -0.31
EXOSC1-202ENST00000370885 WDR46O15213 610 aaKnown RBP13.13□□□□□ -0.31
EXOSC1-202ENST00000370885 COBLO75128 1261 aa13.13□□□□□ -0.31
EXOSC1-202ENST00000370885 GNAT2P19087 354 aa13.13□□□□□ -0.31
EXOSC1-202ENST00000370885 ERCC3P19447 782 aa13.13□□□□□ -0.31
EXOSC1-202ENST00000370885 RGS2P41220 211 aa13.13□□□□□ -0.31
EXOSC1-202ENST00000370885 TDO2P48775 406 aa13.13□□□□□ -0.31
EXOSC1-202ENST00000370885 FAM83BQ5T0W9 1011 aa13.13□□□□□ -0.31
EXOSC1-202ENST00000370885 WDR78Q5VTH9 848 aa13.13□□□□□ -0.31
EXOSC1-202ENST00000370885 LHX8Q68G74 356 aa13.13□□□□□ -0.31
EXOSC1-202ENST00000370885 SAMD1Q6SPF0 538 aaPredicted RBP13.13□□□□□ -0.31
EXOSC1-202ENST00000370885 AMOTL1Q8IY63 956 aa13.13□□□□□ -0.31
EXOSC1-202ENST00000370885 TRPV1Q8NER1 839 aa13.13□□□□□ -0.31
EXOSC1-202ENST00000370885 REPS2Q8NFH8 660 aa13.13□□□□□ -0.31
EXOSC1-202ENST00000370885 PAWRQ96IZ0 340 aaKnown RBP13.13□□□□□ -0.31
EXOSC1-202ENST00000370885 APBA2Q99767 749 aa13.13□□□□□ -0.31
EXOSC1-202ENST00000370885 HMX1Q9NP08 348 aaPredicted RBP13.13□□□□□ -0.31
EXOSC1-202ENST00000370885 ZNFX1Q9P2E3 1918 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms