RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 CASP8AP2Q9UKL3 1982 aa17.51■□□□□ 0.39
COL9A1-204ENST00000370496 B4E1Z4 1266 aa17.51■□□□□ 0.39
COL9A1-204ENST00000370496 GPR25O00155 361 aa17.51■□□□□ 0.39
COL9A1-204ENST00000370496 NMT2O60551 498 aa17.51■□□□□ 0.39
COL9A1-204ENST00000370496 KDM4AO75164 1064 aa17.51■□□□□ 0.39
COL9A1-204ENST00000370496 RALYLQ86SE5 291 aaKnown RBP17.51■□□□□ 0.39
COL9A1-204ENST00000370496 SIAH1Q8IUQ4 282 aa17.51■□□□□ 0.39
COL9A1-204ENST00000370496 SPICE1Q8N0Z3 855 aa17.51■□□□□ 0.39
COL9A1-204ENST00000370496 TANGO6Q9C0B7 1094 aa17.51■□□□□ 0.39
COL9A1-204ENST00000370496 RPAP3Q9H6T3 665 aaPredicted RBP17.51■□□□□ 0.39
COL9A1-204ENST00000370496 GTF3C3Q9Y5Q9 886 aa17.51■□□□□ 0.39
COL9A1-204ENST00000370496 TLR2O60603 784 aa17.5■□□□□ 0.39
COL9A1-204ENST00000370496 REC8O95072 547 aa17.5■□□□□ 0.39
COL9A1-204ENST00000370496 PARP14Q460N5 1801 aa17.5■□□□□ 0.39
COL9A1-204ENST00000370496 RNF20Q5VTR2 975 aa17.5■□□□□ 0.39
COL9A1-204ENST00000370496 IQCA1Q86XH1 822 aa17.5■□□□□ 0.39
COL9A1-204ENST00000370496 ASCC2Q9H1I8 757 aaPredicted RBP17.5■□□□□ 0.39
COL9A1-204ENST00000370496 CPA4Q9UI42 421 aa17.5■□□□□ 0.39
COL9A1-204ENST00000370496 ADGRA2Q96PE1 1338 aa17.49■□□□□ 0.39
COL9A1-204ENST00000370496 USP17L15C9J2P7 530 aa17.49■□□□□ 0.39
COL9A1-204ENST00000370496 USP17L13C9JLJ4 530 aa17.49■□□□□ 0.39
COL9A1-204ENST00000370496 USP17L11C9JVI0 530 aa17.49■□□□□ 0.39
COL9A1-204ENST00000370496 USP17L18D6R9N7 530 aa17.49■□□□□ 0.39
COL9A1-204ENST00000370496 USP17L22D6RA61 530 aa17.49■□□□□ 0.39
COL9A1-204ENST00000370496 USP17L17D6RBQ6 530 aa17.49■□□□□ 0.39
COL9A1-204ENST00000370496 USP17L19D6RCP7 530 aa17.49■□□□□ 0.39
COL9A1-204ENST00000370496 USP17L20D6RJB6 530 aa17.49■□□□□ 0.39
COL9A1-204ENST00000370496 WDR46O15213 610 aaKnown RBP17.49■□□□□ 0.39
COL9A1-204ENST00000370496 HOXA7P31268 230 aaPredicted RBP17.49■□□□□ 0.39
COL9A1-204ENST00000370496 USP17L24Q0WX57 530 aa17.49■□□□□ 0.39
COL9A1-204ENST00000370496 NOM1Q5C9Z4 860 aaKnown RBP17.49■□□□□ 0.39
COL9A1-204ENST00000370496 ZNF296Q8WUU4 475 aaPredicted RBP17.49■□□□□ 0.39
COL9A1-204ENST00000370496 PRDM10Q9NQV6 1147 aa17.49■□□□□ 0.39
COL9A1-204ENST00000370496 IL17RBQ9NRM6 502 aa17.49■□□□□ 0.39
COL9A1-204ENST00000370496 ISY1Q9ULR0 285 aaKnown RBP17.49■□□□□ 0.39
COL9A1-204ENST00000370496 SYNPO2Q9UMS6 1093 aa17.49■□□□□ 0.39
COL9A1-204ENST00000370496 A0A0G2JMZ2 1700 aa17.48■□□□□ 0.39
COL9A1-204ENST00000370496 E7EWF7 191 aa17.48■□□□□ 0.39
COL9A1-204ENST00000370496 SLC27A2O14975 620 aa17.48■□□□□ 0.39
COL9A1-204ENST00000370496 FKTNO75072 461 aa17.48■□□□□ 0.39
COL9A1-204ENST00000370496 CREB3L3Q68CJ9 461 aa17.48■□□□□ 0.39
COL9A1-204ENST00000370496 ZKSCAN3Q9BRR0 538 aa17.48■□□□□ 0.39
COL9A1-204ENST00000370496 UBAC1Q9BSL1 405 aa17.48■□□□□ 0.39
COL9A1-204ENST00000370496 TCP11L1Q9NUJ3 509 aa17.48■□□□□ 0.39
COL9A1-204ENST00000370496 ZSWIM8A7E2V4 1837 aa17.47■□□□□ 0.39
COL9A1-204ENST00000370496 NDUFB10O96000 172 aa17.47■□□□□ 0.39
COL9A1-204ENST00000370496 HERVK_113P62684 666 aa17.47■□□□□ 0.39
COL9A1-204ENST00000370496 SP3Q02447 781 aa17.47■□□□□ 0.39
COL9A1-204ENST00000370496 KIAA1755Q5JYT7 1200 aa17.47■□□□□ 0.39
COL9A1-204ENST00000370496 GMCL1P1Q8NEA9 526 aa17.47■□□□□ 0.39
COL9A1-204ENST00000370496 NCOA7Q8NI08 942 aa17.47■□□□□ 0.39
COL9A1-204ENST00000370496 TAF6LQ9Y6J9 622 aa17.47■□□□□ 0.39
COL9A1-204ENST00000370496 F5H6K3 240 aa17.46■□□□□ 0.39
COL9A1-204ENST00000370496 FLOT1O75955 427 aa17.46■□□□□ 0.39
COL9A1-204ENST00000370496 GCLCP48506 637 aaPredicted RBP17.46■□□□□ 0.39
COL9A1-204ENST00000370496 KLRC3Q07444 240 aa17.46■□□□□ 0.39
COL9A1-204ENST00000370496 CCDC178Q5BJE1 867 aa17.46■□□□□ 0.39
COL9A1-204ENST00000370496 FAM83BQ5T0W9 1011 aa17.46■□□□□ 0.39
COL9A1-204ENST00000370496 SAMD1Q6SPF0 538 aaPredicted RBP17.46■□□□□ 0.39
COL9A1-204ENST00000370496 CATSPERGQ6ZRH7 1159 aa17.46■□□□□ 0.39
COL9A1-204ENST00000370496 STOX1Q6ZVD7 989 aa17.46■□□□□ 0.39
COL9A1-204ENST00000370496 NKX2-3Q8TAU0 364 aa17.46■□□□□ 0.39
COL9A1-204ENST00000370496 GTF3C2Q8WUA4 911 aaPredicted RBP17.46■□□□□ 0.39
COL9A1-204ENST00000370496 MKL1Q969V6 931 aa17.46■□□□□ 0.39
COL9A1-204ENST00000370496 MTMR7Q9Y216 660 aa17.46■□□□□ 0.39
COL9A1-204ENST00000370496 MGAMO43451 1857 aa17.45■□□□□ 0.38
COL9A1-204ENST00000370496 TNKSO95271 1327 aa17.45■□□□□ 0.38
COL9A1-204ENST00000370496 TOP1P11387 765 aaKnown RBP17.45■□□□□ 0.38
COL9A1-204ENST00000370496 ZKSCAN1P17029 563 aaPredicted RBP17.45■□□□□ 0.38
COL9A1-204ENST00000370496 NECTIN1Q15223 517 aa17.45■□□□□ 0.38
COL9A1-204ENST00000370496 SLFN13Q68D06 897 aa17.45■□□□□ 0.38
COL9A1-204ENST00000370496 C17orf99Q6UX52 265 aa17.45■□□□□ 0.38
COL9A1-204ENST00000370496 ANKRD13CQ8N6S4 541 aa17.45■□□□□ 0.38
COL9A1-204ENST00000370496 ERO1AQ96HE7 468 aa17.45■□□□□ 0.38
COL9A1-204ENST00000370496 ZSCAN10Q96SZ4 725 aaPredicted RBP17.45■□□□□ 0.38
COL9A1-204ENST00000370496 NUP88Q99567 741 aaPredicted RBP17.45■□□□□ 0.38
COL9A1-204ENST00000370496 ZSWIM5Q9P217 1185 aa17.45■□□□□ 0.38
COL9A1-204ENST00000370496 RLFQ13129 1914 aa17.45■□□□□ 0.38
COL9A1-204ENST00000370496 BCRP11274 1271 aa17.44■□□□□ 0.38
COL9A1-204ENST00000370496 KIF22Q14807 665 aa17.44■□□□□ 0.38
COL9A1-204ENST00000370496 FAM110CQ1W6H9 321 aa17.44■□□□□ 0.38
COL9A1-204ENST00000370496 CD99L2Q8TCZ2 262 aa17.44■□□□□ 0.38
COL9A1-204ENST00000370496 P2RX7Q99572 595 aaKnown RBP17.44■□□□□ 0.38
COL9A1-204ENST00000370496 PAGR1Q9BTK6 254 aa17.44■□□□□ 0.38
COL9A1-204ENST00000370496 COL11A1P12107 1806 aaPredicted RBP17.44■□□□□ 0.38
COL9A1-204ENST00000370496 ERICH2A1L162 156 aa17.43■□□□□ 0.38
COL9A1-204ENST00000370496 SPDYE16A6NNV3 312 aaPredicted RBP17.43■□□□□ 0.38
COL9A1-204ENST00000370496 ECM2O94769 699 aaPredicted RBP17.43■□□□□ 0.38
COL9A1-204ENST00000370496 NOVP48745 357 aa17.43■□□□□ 0.38
COL9A1-204ENST00000370496 LACTBP83111 547 aaPredicted RBP17.43■□□□□ 0.38
COL9A1-204ENST00000370496 SART3Q15020 963 aaKnown RBP17.43■□□□□ 0.38
COL9A1-204ENST00000370496 CCDC96Q2M329 555 aa17.43■□□□□ 0.38
COL9A1-204ENST00000370496 CYB5R4Q7L1T6 521 aa17.43■□□□□ 0.38
COL9A1-204ENST00000370496 ENAHQ8N8S7 591 aaPredicted RBP17.43■□□□□ 0.38
COL9A1-204ENST00000370496 CHMP4CQ96CF2 233 aa17.43■□□□□ 0.38
COL9A1-204ENST00000370496 TTC14Q96N46 770 aa17.43■□□□□ 0.38
COL9A1-204ENST00000370496 TMEM47Q9BQJ4 181 aa17.43■□□□□ 0.38
COL9A1-204ENST00000370496 KAT14Q9H8E8 782 aa17.43■□□□□ 0.38
COL9A1-204ENST00000370496 MYPNQ86TC9 1320 aa17.43■□□□□ 0.38
COL9A1-204ENST00000370496 BMP3P12645 472 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms