RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 USP17L11C9JVI0 530 aa16.21■□□□□ 0.19
SSR4-202ENST00000370085 USP17L18D6R9N7 530 aa16.21■□□□□ 0.19
SSR4-202ENST00000370085 USP17L22D6RA61 530 aa16.21■□□□□ 0.19
SSR4-202ENST00000370085 USP17L17D6RBQ6 530 aa16.21■□□□□ 0.19
SSR4-202ENST00000370085 USP17L19D6RCP7 530 aa16.21■□□□□ 0.19
SSR4-202ENST00000370085 USP17L20D6RJB6 530 aa16.21■□□□□ 0.19
SSR4-202ENST00000370085 E7EWF7 191 aa16.21■□□□□ 0.19
SSR4-202ENST00000370085 SLC27A2O14975 620 aa16.21■□□□□ 0.19
SSR4-202ENST00000370085 HOXA7P31268 230 aaPredicted RBP16.21■□□□□ 0.19
SSR4-202ENST00000370085 USP17L24Q0WX57 530 aa16.21■□□□□ 0.19
SSR4-202ENST00000370085 MOGSQ13724 837 aa16.21■□□□□ 0.19
SSR4-202ENST00000370085 NECTIN1Q15223 517 aa16.21■□□□□ 0.19
SSR4-202ENST00000370085 CREB3L3Q68CJ9 461 aa16.21■□□□□ 0.19
SSR4-202ENST00000370085 GPAT2Q6NUI2 795 aa16.21■□□□□ 0.19
SSR4-202ENST00000370085 GTF3C2Q8WUA4 911 aaPredicted RBP16.21■□□□□ 0.19
SSR4-202ENST00000370085 MKL1Q969V6 931 aa16.21■□□□□ 0.19
SSR4-202ENST00000370085 EMILIN3Q9NT22 766 aa16.21■□□□□ 0.19
SSR4-202ENST00000370085 A0A1W2PRG0 241 aa16.2■□□□□ 0.18
SSR4-202ENST00000370085 WDR46O15213 610 aaKnown RBP16.2■□□□□ 0.18
SSR4-202ENST00000370085 FOXN1O15353 648 aa16.2■□□□□ 0.18
SSR4-202ENST00000370085 TBC1D8O95759 1140 aa16.2■□□□□ 0.18
SSR4-202ENST00000370085 VCAM1P19320 739 aa16.2■□□□□ 0.18
SSR4-202ENST00000370085 CRHR2Q13324 411 aa16.2■□□□□ 0.18
SSR4-202ENST00000370085 NOM1Q5C9Z4 860 aaKnown RBP16.2■□□□□ 0.18
SSR4-202ENST00000370085 TREML2Q5T2D2 321 aa16.2■□□□□ 0.18
SSR4-202ENST00000370085 CLEC10AQ8IUN9 316 aa16.2■□□□□ 0.18
SSR4-202ENST00000370085 TLR2O60603 784 aa16.19■□□□□ 0.18
SSR4-202ENST00000370085 TOP1P11387 765 aaKnown RBP16.19■□□□□ 0.18
SSR4-202ENST00000370085 GCLCP48506 637 aaPredicted RBP16.19■□□□□ 0.18
SSR4-202ENST00000370085 ARHGEF6Q15052 776 aa16.19■□□□□ 0.18
SSR4-202ENST00000370085 DGKHQ86XP1 1220 aa16.19■□□□□ 0.18
SSR4-202ENST00000370085 GMCL1P1Q8NEA9 526 aa16.19■□□□□ 0.18
SSR4-202ENST00000370085 ZSCAN10Q96SZ4 725 aaPredicted RBP16.19■□□□□ 0.18
SSR4-202ENST00000370085 TANGO6Q9C0B7 1094 aa16.19■□□□□ 0.18
SSR4-202ENST00000370085 ASCC2Q9H1I8 757 aaPredicted RBP16.19■□□□□ 0.18
SSR4-202ENST00000370085 RPAP3Q9H6T3 665 aaPredicted RBP16.19■□□□□ 0.18
SSR4-202ENST00000370085 ZSWIM5Q9P217 1185 aa16.19■□□□□ 0.18
SSR4-202ENST00000370085 F5H6K3 240 aa16.18■□□□□ 0.18
SSR4-202ENST00000370085 KLRC3Q07444 240 aa16.18■□□□□ 0.18
SSR4-202ENST00000370085 KIF22Q14807 665 aa16.18■□□□□ 0.18
SSR4-202ENST00000370085 SIAH1Q8IUQ4 282 aa16.18■□□□□ 0.18
SSR4-202ENST00000370085 SPICE1Q8N0Z3 855 aa16.18■□□□□ 0.18
SSR4-202ENST00000370085 IL17RBQ9NRM6 502 aa16.18■□□□□ 0.18
SSR4-202ENST00000370085 HOXC10Q9NYD6 342 aa16.18■□□□□ 0.18
SSR4-202ENST00000370085 ISY1Q9ULR0 285 aaKnown RBP16.18■□□□□ 0.18
SSR4-202ENST00000370085 TACC3Q9Y6A5 838 aa16.18■□□□□ 0.18
SSR4-202ENST00000370085 GPR25O00155 361 aa16.17■□□□□ 0.18
SSR4-202ENST00000370085 NMT2O60551 498 aa16.17■□□□□ 0.18
SSR4-202ENST00000370085 HMGB1P09429 215 aaKnown RBP16.17■□□□□ 0.18
SSR4-202ENST00000370085 HSPA8P11142 646 aaKnown RBP16.17■□□□□ 0.18
SSR4-202ENST00000370085 MCM5P33992 734 aa16.17■□□□□ 0.18
SSR4-202ENST00000370085 CATSPERGQ6ZRH7 1159 aa16.17■□□□□ 0.18
SSR4-202ENST00000370085 LRRC47Q8N1G4 583 aaKnown RBP16.17■□□□□ 0.18
SSR4-202ENST00000370085 MTA3Q9BTC8 594 aa16.17■□□□□ 0.18
SSR4-202ENST00000370085 KAT14Q9H8E8 782 aa16.17■□□□□ 0.18
SSR4-202ENST00000370085 TSKSQ9UJT2 592 aa16.17■□□□□ 0.18
SSR4-202ENST00000370085 TNKSO95271 1327 aa16.17■□□□□ 0.18
SSR4-202ENST00000370085 IFIT3O14879 490 aaKnown RBP16.16■□□□□ 0.18
SSR4-202ENST00000370085 FKTNO75072 461 aa16.16■□□□□ 0.18
SSR4-202ENST00000370085 FLOT1O75955 427 aa16.16■□□□□ 0.18
SSR4-202ENST00000370085 NDUFB10O96000 172 aa16.16■□□□□ 0.18
SSR4-202ENST00000370085 CYP2C8P10632 490 aa16.16■□□□□ 0.18
SSR4-202ENST00000370085 PSMA5P28066 241 aa16.16■□□□□ 0.18
SSR4-202ENST00000370085 HSPA4P34932 840 aa16.16■□□□□ 0.18
SSR4-202ENST00000370085 SLC1A4P43007 532 aa16.16■□□□□ 0.18
SSR4-202ENST00000370085 LBX1P52954 281 aa16.16■□□□□ 0.18
SSR4-202ENST00000370085 DGKZQ13574 1117 aa16.16■□□□□ 0.18
SSR4-202ENST00000370085 COG2Q14746 738 aa16.16■□□□□ 0.18
SSR4-202ENST00000370085 TSGA10IPQ3SY00 556 aa16.16■□□□□ 0.18
SSR4-202ENST00000370085 IFIT1BQ5T764 474 aaKnown RBP16.16■□□□□ 0.18
SSR4-202ENST00000370085 SLFN13Q68D06 897 aa16.16■□□□□ 0.18
SSR4-202ENST00000370085 ZKSCAN3Q9BRR0 538 aa16.16■□□□□ 0.18
SSR4-202ENST00000370085 PRDM10Q9NQV6 1147 aa16.16■□□□□ 0.18
SSR4-202ENST00000370085 MYPNQ86TC9 1320 aa16.16■□□□□ 0.18
SSR4-202ENST00000370085 BMP3P12645 472 aa16.15■□□□□ 0.18
SSR4-202ENST00000370085 NOVP48745 357 aa16.15■□□□□ 0.18
SSR4-202ENST00000370085 HERVK_113P62684 666 aa16.15■□□□□ 0.18
SSR4-202ENST00000370085 SP3Q02447 781 aa16.15■□□□□ 0.18
SSR4-202ENST00000370085 IKQ13123 557 aaPredicted RBP16.15■□□□□ 0.18
SSR4-202ENST00000370085 TMTC2Q8N394 836 aa16.15■□□□□ 0.18
SSR4-202ENST00000370085 DCAF4Q8WV16 495 aa16.15■□□□□ 0.18
SSR4-202ENST00000370085 ERO1AQ96HE7 468 aa16.15■□□□□ 0.18
SSR4-202ENST00000370085 GMCL1Q96IK5 515 aa16.15■□□□□ 0.18
SSR4-202ENST00000370085 NEK1Q96PY6 1258 aa16.15■□□□□ 0.18
SSR4-202ENST00000370085 TMEM47Q9BQJ4 181 aa16.15■□□□□ 0.18
SSR4-202ENST00000370085 CTDP1Q9Y5B0 961 aaPredicted RBP16.15■□□□□ 0.18
SSR4-202ENST00000370085 WTAPQ15007 396 aa16.14■□□□□ 0.17
SSR4-202ENST00000370085 FAM110CQ1W6H9 321 aa16.14■□□□□ 0.17
SSR4-202ENST00000370085 TMEM67Q5HYA8 995 aa16.14■□□□□ 0.17
SSR4-202ENST00000370085 FAM83BQ5T0W9 1011 aa16.14■□□□□ 0.17
SSR4-202ENST00000370085 RCSD1Q6JBY9 416 aa16.14■□□□□ 0.17
SSR4-202ENST00000370085 C17orf99Q6UX52 265 aa16.14■□□□□ 0.17
SSR4-202ENST00000370085 STOX1Q6ZVD7 989 aa16.14■□□□□ 0.17
SSR4-202ENST00000370085 CCAR1Q8IX12 1150 aaKnown RBP16.14■□□□□ 0.17
SSR4-202ENST00000370085 MB21D2Q8IYB1 491 aaPredicted RBP16.14■□□□□ 0.17
SSR4-202ENST00000370085 MB21D1Q8N884 522 aa16.14■□□□□ 0.17
SSR4-202ENST00000370085 ENAHQ8N8S7 591 aaPredicted RBP16.14■□□□□ 0.17
SSR4-202ENST00000370085 CHURC1Q8WUH1 139 aa16.14■□□□□ 0.17
SSR4-202ENST00000370085 ANKS1AQ92625 1134 aa16.14■□□□□ 0.17
SSR4-202ENST00000370085 TMEM87BQ96K49 555 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms