RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 FTOQ9C0B1 505 aaKnown RBP eCLIP11.43□□□□□ -0.58
PRPF38B-203ENST00000370025 LCMT1Q9UIC8 334 aa11.43□□□□□ -0.58
PRPF38B-203ENST00000370025 MRVI1Q9Y6F6 885 aa11.43□□□□□ -0.58
PRPF38B-203ENST00000370025 NAV1Q8NEY1 1877 aa11.43□□□□□ -0.58
PRPF38B-203ENST00000370025 PODNQ7Z5L7 613 aa11.42□□□□□ -0.58
PRPF38B-203ENST00000370025 CTCFLQ8NI51 663 aaPredicted RBP11.42□□□□□ -0.58
PRPF38B-203ENST00000370025 DYNLL2Q96FJ2 89 aa11.42□□□□□ -0.58
PRPF38B-203ENST00000370025 RNF26Q9BY78 433 aaPredicted RBP11.42□□□□□ -0.58
PRPF38B-203ENST00000370025 ROBO3Q96MS0 1386 aa11.42□□□□□ -0.58
PRPF38B-203ENST00000370025 F8W031 263 aaPredicted RBP11.42□□□□□ -0.58
PRPF38B-203ENST00000370025 YEATS4O95619 227 aa11.42□□□□□ -0.58
PRPF38B-203ENST00000370025 XBP1P17861 261 aa11.42□□□□□ -0.58
PRPF38B-203ENST00000370025 NBPF11Q86T75 865 aa11.42□□□□□ -0.58
PRPF38B-203ENST00000370025 KCNG4Q8TDN1 519 aa11.42□□□□□ -0.58
PRPF38B-203ENST00000370025 FBXO41Q8TF61 875 aa11.42□□□□□ -0.58
PRPF38B-203ENST00000370025 POLR3EQ9NVU0 708 aa11.42□□□□□ -0.58
PRPF38B-203ENST00000370025 TTF2Q9UNY4 1162 aaKnown RBP11.42□□□□□ -0.58
PRPF38B-203ENST00000370025 DAGLAQ9Y4D2 1042 aa11.42□□□□□ -0.58
PRPF38B-203ENST00000370025 KIF28PB7ZC32 967 aa11.42□□□□□ -0.58
PRPF38B-203ENST00000370025 TSPY3P0CV98 308 aa11.42□□□□□ -0.58
PRPF38B-203ENST00000370025 TSPY8P0CW00 308 aa11.42□□□□□ -0.58
PRPF38B-203ENST00000370025 RHBDL3P58872 404 aa11.42□□□□□ -0.58
PRPF38B-203ENST00000370025 TROAPQ12815 778 aa11.42□□□□□ -0.58
PRPF38B-203ENST00000370025 ARHGAP29Q52LW3 1261 aa11.42□□□□□ -0.58
PRPF38B-203ENST00000370025 DGKHQ86XP1 1220 aa11.42□□□□□ -0.58
PRPF38B-203ENST00000370025 CMTR1Q8N1G2 835 aaKnown RBP11.42□□□□□ -0.58
PRPF38B-203ENST00000370025 DLEC1Q9Y238 1755 aa11.42□□□□□ -0.58
PRPF38B-203ENST00000370025 GOLGA6L19H0YKK7 550 aa11.41□□□□□ -0.58
PRPF38B-203ENST00000370025 NMT2O60551 498 aa11.41□□□□□ -0.58
PRPF38B-203ENST00000370025 CHRNA5P30532 468 aa11.41□□□□□ -0.58
PRPF38B-203ENST00000370025 ZNF75DP51815 510 aa11.41□□□□□ -0.58
PRPF38B-203ENST00000370025 CCDC73Q6ZRK6 1079 aa11.41□□□□□ -0.58
PRPF38B-203ENST00000370025 CCAR1Q8IX12 1150 aaKnown RBP11.41□□□□□ -0.58
PRPF38B-203ENST00000370025 FUCA2Q9BTY2 467 aa11.41□□□□□ -0.58
PRPF38B-203ENST00000370025 KAT14Q9H8E8 782 aa11.41□□□□□ -0.58
PRPF38B-203ENST00000370025 ZNF219Q9P2Y4 722 aaPredicted RBP11.41□□□□□ -0.58
PRPF38B-203ENST00000370025 FLT1P17948 1338 aa11.41□□□□□ -0.58
PRPF38B-203ENST00000370025 PLCD1P51178 756 aa11.41□□□□□ -0.58
PRPF38B-203ENST00000370025 HOMER1Q86YM7 354 aa11.41□□□□□ -0.58
PRPF38B-203ENST00000370025 LINC00301Q8NCQ3 95 aa11.41□□□□□ -0.58
PRPF38B-203ENST00000370025 QSER1Q2KHR3 1735 aa11.41□□□□□ -0.58
PRPF38B-203ENST00000370025 GUCY1A2P33402 732 aa11.41□□□□□ -0.58
PRPF38B-203ENST00000370025 ANO1Q5XXA6 986 aa11.41□□□□□ -0.58
PRPF38B-203ENST00000370025 CC2D2BQ6DHV5 1058 aa11.41□□□□□ -0.58
PRPF38B-203ENST00000370025 CLIC4Q9Y696 253 aa11.41□□□□□ -0.58
PRPF38B-203ENST00000370025 SPTLC2O15270 562 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 PRPF3O43395 683 aaKnown RBP11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 MMP1P03956 469 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 KIF5BP33176 963 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 CERS5Q8N5B7 392 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 DBNDD1Q9H9R9 158 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 MYH6P13533 1939 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 ECM29Q5VYK3 1845 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 SLU7O95391 586 aaKnown RBP11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 CYP2C19P33261 490 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 CLCN6P51797 869 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 GTF2A1P52655 376 aaPredicted RBP11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 BMS1Q14692 1282 aaKnown RBP11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 CREBRFQ8IUR6 639 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 CCAR2Q8N163 923 aaKnown RBP11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 RASSF4Q9H2L5 321 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 CLSTN2Q9H4D0 955 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 TCP11L1Q9NUJ3 509 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 CDK5RAP2Q96SN8 1893 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 BECN2A8MW95 431 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 UBE2Q2LH0YL09 131 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 TULP2O00295 520 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 NR1I2O75469 434 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 CDK8P49336 464 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 ADALQ6DHV7 355 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 C16orf86Q6ZW13 317 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 ANKS1AQ92625 1134 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 TEKT1Q969V4 418 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 PCDHA7Q9UN72 937 aa11.4□□□□□ -0.58
PRPF38B-203ENST00000370025 SLX4Q8IY92 1834 aa11.4□□□□□ -0.59
PRPF38B-203ENST00000370025 ISM2Q6H9L7 571 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 HHIPL2Q6UWX4 724 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 TMTC3Q6ZXV5 915 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 SUPT20HQ8NEM7 779 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 V9GY48 417 aaPredicted RBP11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 MYH1P12882 1939 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 RCSD1Q6JBY9 416 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 DEFB132Q7Z7B7 95 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 DIS3L2Q8IYB7 885 aaKnown RBP11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 JMYQ8N9B5 988 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 SLC44A5Q8NCS7 719 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 SMARCE1Q969G3 411 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 FOXP1Q9H334 677 aaPredicted RBP11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 KCNJ14Q9UNX9 436 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 A0A1W2PQ27 194 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 A0A1W2PQ64 194 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 A0A1W2PQD8 194 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 PLEKHA8P1O95397 391 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 RASA1P20936 1047 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 LMAN1P49257 510 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 SCNN1DP51172 638 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 PICALMQ13492 652 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 TEX35Q5T0J7 233 aa11.39□□□□□ -0.59
PRPF38B-203ENST00000370025 NOSTRINQ8IVI9 506 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms