RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 BEGAINQ9BUH8 593 aa20.1■□□□□ 0.81
SNX27-202ENST00000368841 DNAJC5BQ9UF47 199 aa20.1■□□□□ 0.81
SNX27-202ENST00000368841 ALAS1P13196 640 aa20.1■□□□□ 0.81
SNX27-202ENST00000368841 PPP1R16BQ96T49 567 aa20.1■□□□□ 0.81
SNX27-202ENST00000368841 ANKFY1Q9P2R3 1169 aa20.1■□□□□ 0.81
SNX27-202ENST00000368841 TTC19Q6DKK2 380 aaPredicted RBP20.1■□□□□ 0.81
SNX27-202ENST00000368841 IFT20Q8IY31 132 aa20.1■□□□□ 0.81
SNX27-202ENST00000368841 RSAD2Q8WXG1 361 aa20.1■□□□□ 0.81
SNX27-202ENST00000368841 MLXIPQ9HAP2 919 aa20.1■□□□□ 0.81
SNX27-202ENST00000368841 GBP1P32455 592 aa20.1■□□□□ 0.81
SNX27-202ENST00000368841 CCDC62Q6P9F0 684 aa20.1■□□□□ 0.81
SNX27-202ENST00000368841 NIM1KQ8IY84 436 aa20.1■□□□□ 0.81
SNX27-202ENST00000368841 PEX26Q7Z412 305 aa20.1■□□□□ 0.81
SNX27-202ENST00000368841 TMEM87BQ96K49 555 aa20.1■□□□□ 0.81
SNX27-202ENST00000368841 SCYL1Q96KG9 808 aa20.1■□□□□ 0.81
SNX27-202ENST00000368841 ORAI2Q96SN7 254 aa20.1■□□□□ 0.81
SNX27-202ENST00000368841 MAP3K19Q56UN5 1328 aa20.09■□□□□ 0.81
SNX27-202ENST00000368841 KCNA6P17658 529 aa20.09■□□□□ 0.81
SNX27-202ENST00000368841 MIER3Q7Z3K6 550 aa20.09■□□□□ 0.81
SNX27-202ENST00000368841 C2CD5Q86YS7 1000 aa20.09■□□□□ 0.81
SNX27-202ENST00000368841 NUF2Q9BZD4 464 aa20.09■□□□□ 0.81
SNX27-202ENST00000368841 FEZ2Q9UHY8 353 aaPredicted RBP20.09■□□□□ 0.81
SNX27-202ENST00000368841 SMCO2A6NFE2 343 aa20.09■□□□□ 0.81
SNX27-202ENST00000368841 I3L4J1 428 aa20.09■□□□□ 0.81
SNX27-202ENST00000368841 GPBP1Q86WP2 473 aa20.09■□□□□ 0.81
SNX27-202ENST00000368841 NCAPG2Q86XI2 1143 aa20.09■□□□□ 0.81
SNX27-202ENST00000368841 APPBP2Q92624 585 aa20.09■□□□□ 0.81
SNX27-202ENST00000368841 EEF2KMTQ96G04 330 aa20.09■□□□□ 0.81
SNX27-202ENST00000368841 TTF2Q9UNY4 1162 aaKnown RBP20.09■□□□□ 0.81
SNX27-202ENST00000368841 DLATP10515 647 aaKnown RBP20.08■□□□□ 0.81
SNX27-202ENST00000368841 ZNF75DP51815 510 aa20.08■□□□□ 0.81
SNX27-202ENST00000368841 SH3TC1Q8TE82 1336 aa20.08■□□□□ 0.81
SNX27-202ENST00000368841 ATF7P17544 494 aaPredicted RBP20.08■□□□□ 0.81
SNX27-202ENST00000368841 MKRN3Q13064 507 aaKnown RBP20.08■□□□□ 0.81
SNX27-202ENST00000368841 KRT40Q6A162 431 aa20.08■□□□□ 0.81
SNX27-202ENST00000368841 VSIG1Q86XK7 387 aa20.08■□□□□ 0.81
SNX27-202ENST00000368841 ABCF3Q9NUQ8 709 aa20.08■□□□□ 0.81
SNX27-202ENST00000368841 ERCC6LQ2NKX8 1250 aa20.08■□□□□ 0.8
SNX27-202ENST00000368841 DESI2Q9BSY9 194 aa20.08■□□□□ 0.8
SNX27-202ENST00000368841 IFNB1P01574 187 aa20.08■□□□□ 0.8
SNX27-202ENST00000368841 SMC5Q8IY18 1101 aa20.08■□□□□ 0.8
SNX27-202ENST00000368841 DEPTORQ8TB45 409 aa20.08■□□□□ 0.8
SNX27-202ENST00000368841 CARD14Q9BXL6 1004 aa20.08■□□□□ 0.8
SNX27-202ENST00000368841 SUGCTQ9HAC7 445 aa20.08■□□□□ 0.8
SNX27-202ENST00000368841 GAS7O60861 476 aa20.08■□□□□ 0.8
SNX27-202ENST00000368841 OATP04181 439 aa20.08■□□□□ 0.8
SNX27-202ENST00000368841 GYG1P46976 350 aa20.08■□□□□ 0.8
SNX27-202ENST00000368841 RSPH3Q86UC2 560 aa20.08■□□□□ 0.8
SNX27-202ENST00000368841 PNMA8AQ86V59 439 aaPredicted RBP20.08■□□□□ 0.8
SNX27-202ENST00000368841 IP6K1Q92551 441 aa20.08■□□□□ 0.8
SNX27-202ENST00000368841 ZBTB7BO15156 539 aaPredicted RBP20.07■□□□□ 0.8
SNX27-202ENST00000368841 CUTAO60888 179 aa20.07■□□□□ 0.8
SNX27-202ENST00000368841 TCIRG1Q13488 830 aa20.07■□□□□ 0.8
SNX27-202ENST00000368841 DLGAP5Q15398 846 aa20.07■□□□□ 0.8
SNX27-202ENST00000368841 CASP2P42575 452 aa20.07■□□□□ 0.8
SNX27-202ENST00000368841 SLC12A2P55011 1212 aa20.07■□□□□ 0.8
SNX27-202ENST00000368841 IL1RL1Q01638 556 aa20.07■□□□□ 0.8
SNX27-202ENST00000368841 MAGEA1P43355 309 aa20.07■□□□□ 0.8
SNX27-202ENST00000368841 DNAJC10Q8IXB1 793 aa20.07■□□□□ 0.8
SNX27-202ENST00000368841 CCDC87Q9NVE4 849 aa20.07■□□□□ 0.8
SNX27-202ENST00000368841 PALM2Q8IXS6 379 aa20.07■□□□□ 0.8
SNX27-202ENST00000368841 KRT12Q99456 494 aa20.07■□□□□ 0.8
SNX27-202ENST00000368841 SWAP70Q9UH65 585 aa20.07■□□□□ 0.8
SNX27-202ENST00000368841 NFE2L3Q9Y4A8 694 aa20.07■□□□□ 0.8
SNX27-202ENST00000368841 GOLGA6BA6NDN3 693 aa20.06■□□□□ 0.8
SNX27-202ENST00000368841 K7ENM7 598 aa20.06■□□□□ 0.8
SNX27-202ENST00000368841 BCRP11274 1271 aa20.06■□□□□ 0.8
SNX27-202ENST00000368841 SND1Q7KZF4 910 aaKnown RBP eCLIP20.06■□□□□ 0.8
SNX27-202ENST00000368841 TRPM2O94759 1503 aa20.06■□□□□ 0.8
SNX27-202ENST00000368841 E7EWF7 191 aa20.06■□□□□ 0.8
SNX27-202ENST00000368841 PPARAQ07869 468 aa20.06■□□□□ 0.8
SNX27-202ENST00000368841 CASQ2O14958 399 aaPredicted RBP20.06■□□□□ 0.8
SNX27-202ENST00000368841 GPR162Q16538 588 aa20.06■□□□□ 0.8
SNX27-202ENST00000368841 OGFRQ9NZT2 677 aa20.06■□□□□ 0.8
SNX27-202ENST00000368841 CAPN9O14815 690 aa20.06■□□□□ 0.8
SNX27-202ENST00000368841 ARFGAP2Q8N6H7 521 aa20.06■□□□□ 0.8
SNX27-202ENST00000368841 GBP7Q8N8V2 638 aaPredicted RBP20.06■□□□□ 0.8
SNX27-202ENST00000368841 DPH5Q9H2P9 285 aa20.06■□□□□ 0.8
SNX27-202ENST00000368841 PTPN22Q9Y2R2 807 aa20.06■□□□□ 0.8
SNX27-202ENST00000368841 STAM2O75886 525 aa20.06■□□□□ 0.8
SNX27-202ENST00000368841 KIF22Q14807 665 aa20.06■□□□□ 0.8
SNX27-202ENST00000368841 DENND2CQ68D51 928 aa20.06■□□□□ 0.8
SNX27-202ENST00000368841 ARHGAP27Q6ZUM4 889 aa20.06■□□□□ 0.8
SNX27-202ENST00000368841 PHLDB2Q86SQ0 1253 aa20.06■□□□□ 0.8
SNX27-202ENST00000368841 RPS6KA1Q15418 735 aa20.05■□□□□ 0.8
SNX27-202ENST00000368841 AFAP1L2Q8N4X5 818 aa20.05■□□□□ 0.8
SNX27-202ENST00000368841 SMYD2Q9NRG4 433 aa20.05■□□□□ 0.8
SNX27-202ENST00000368841 TRIM14Q14142 442 aa20.05■□□□□ 0.8
SNX27-202ENST00000368841 POMGNT1Q8WZA1 660 aa20.05■□□□□ 0.8
SNX27-202ENST00000368841 RAD50Q92878 1312 aa20.05■□□□□ 0.8
SNX27-202ENST00000368841 CACNA2D3Q8IZS8 1091 aa20.05■□□□□ 0.8
SNX27-202ENST00000368841 NME8Q8N427 588 aa20.05■□□□□ 0.8
SNX27-202ENST00000368841 WDR66Q8TBY9 1149 aa20.05■□□□□ 0.8
SNX27-202ENST00000368841 SLC52A2Q9HAB3 445 aa20.05■□□□□ 0.8
SNX27-202ENST00000368841 ZNF827Q17R98 1081 aa20.05■□□□□ 0.8
SNX27-202ENST00000368841 NLRX1Q86UT6 975 aa20.05■□□□□ 0.8
SNX27-202ENST00000368841 KIAA0825Q8IV33 1275 aa20.05■□□□□ 0.8
SNX27-202ENST00000368841 PRPF31Q8WWY3 499 aaKnown RBP20.05■□□□□ 0.8
SNX27-202ENST00000368841 DACT3Q96B18 629 aaPredicted RBP20.05■□□□□ 0.8
SNX27-202ENST00000368841 DDX27Q96GQ7 796 aaKnown RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms