RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 SYNRGQ9UMZ2 1314 aa10.06□□□□□ -0.8
THBS3-201ENST00000368378 PSDA5PKW4 1024 aaPredicted RBP10.06□□□□□ -0.8
THBS3-201ENST00000368378 USP17L12C9JPN9 530 aa10.06□□□□□ -0.8
THBS3-201ENST00000368378 USP17L21D6R901 530 aa10.06□□□□□ -0.8
THBS3-201ENST00000368378 RNF225M0QZC1 329 aaPredicted RBP10.06□□□□□ -0.8
THBS3-201ENST00000368378 KIF2AO00139 706 aaPredicted RBP10.06□□□□□ -0.8
THBS3-201ENST00000368378 TRIM37O94972 964 aa10.06□□□□□ -0.8
THBS3-201ENST00000368378 ATP2B2Q01814 1243 aa10.06□□□□□ -0.8
THBS3-201ENST00000368378 TRPC5Q9UL62 973 aaPredicted RBP10.06□□□□□ -0.8
THBS3-201ENST00000368378 STX8Q9UNK0 236 aa10.06□□□□□ -0.8
THBS3-201ENST00000368378 SPATA31A6Q5VVP1 1343 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 MACROD2A1Z1Q3 448 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 KIF5CO60282 957 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 TADA3O75528 432 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 CCDC175P0C221 793 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 KLRK1P26718 216 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 ATP6V1AP38606 617 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 IGHMBP2P38935 993 aaKnown RBP10.05□□□□□ -0.8
THBS3-201ENST00000368378 CHMP4BP1P59074 171 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 RNASE9P60153 205 aaKnown RBP10.05□□□□□ -0.8
THBS3-201ENST00000368378 UBXN1Q04323 297 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 PPARAQ07869 468 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 DPYDQ12882 1025 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 CUL4BQ13620 913 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 UBE3CQ15386 1083 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 PUM3Q15397 648 aaKnown RBP10.05□□□□□ -0.8
THBS3-201ENST00000368378 TAF3Q5VWG9 929 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 TTC19Q6DKK2 380 aaPredicted RBP10.05□□□□□ -0.8
THBS3-201ENST00000368378 RIN2Q8WYP3 895 aaPredicted RBP10.05□□□□□ -0.8
THBS3-201ENST00000368378 ZNF622Q969S3 477 aaKnown RBP eCLIP10.05□□□□□ -0.87e-6■■■■□ 22.7
THBS3-201ENST00000368378 MYH7P12883 1935 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 CCDC66A2RUB6 948 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 TRIM66O15016 1216 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 TRIM28Q13263 835 aaKnown RBP10.05□□□□□ -0.8
THBS3-201ENST00000368378 NKX1-1Q15270 411 aaPredicted RBP10.05□□□□□ -0.8
THBS3-201ENST00000368378 TMEM87BQ96K49 555 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 CHP1Q99653 195 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 BPIFA3Q9BQP9 254 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 FBXO2Q9UK22 296 aaPredicted RBP10.05□□□□□ -0.8
THBS3-201ENST00000368378 GABPB1Q06547 395 aaPredicted RBP10.05□□□□□ -0.8
THBS3-201ENST00000368378 JAKMIP3Q5VZ66 844 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 CRACR2BQ8N4Y2 399 aaPredicted RBP10.05□□□□□ -0.8
THBS3-201ENST00000368378 ANKRD13CQ8N6S4 541 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 VGLL2Q8N8G2 317 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 CAGE1Q8TC20 777 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 TIGD1Q96MW7 591 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 TUBE1Q9UJT0 475 aa10.05□□□□□ -0.8
THBS3-201ENST00000368378 COL5A2P05997 1499 aaPredicted RBP10.04□□□□□ -0.8
THBS3-201ENST00000368378 AKAP11Q9UKA4 1901 aa10.04□□□□□ -0.8
THBS3-201ENST00000368378 TSPY2A6NKD2 308 aa10.04□□□□□ -0.8
THBS3-201ENST00000368378 IKBKBO14920 756 aa10.04□□□□□ -0.8
THBS3-201ENST00000368378 PDE8AO60658 829 aa10.04□□□□□ -0.8
THBS3-201ENST00000368378 PPP6R2O75170 966 aa10.04□□□□□ -0.8
THBS3-201ENST00000368378 H2AFXP16104 143 aaPredicted RBP10.04□□□□□ -0.8
THBS3-201ENST00000368378 KRT9P35527 623 aa10.04□□□□□ -0.8
THBS3-201ENST00000368378 CYP27A1Q02318 531 aa10.04□□□□□ -0.8
THBS3-201ENST00000368378 SYCP1Q15431 976 aa10.04□□□□□ -0.8
THBS3-201ENST00000368378 FILIP1LQ4L180 1135 aa10.04□□□□□ -0.8
THBS3-201ENST00000368378 CC2D2BQ6DHV5 1058 aa10.04□□□□□ -0.8
THBS3-201ENST00000368378 CC2D1AQ6P1N0 951 aaPredicted RBP10.04□□□□□ -0.8
THBS3-201ENST00000368378 LPIN2Q92539 896 aa10.04□□□□□ -0.8
THBS3-201ENST00000368378 HPSEQ9Y251 543 aa10.04□□□□□ -0.8
THBS3-201ENST00000368378 FMNL1O95466 1100 aaPredicted RBP10.04□□□□□ -0.8
THBS3-201ENST00000368378 TPM1P09493 284 aa10.04□□□□□ -0.8
THBS3-201ENST00000368378 NAP1L1P55209 391 aaKnown RBP10.04□□□□□ -0.8
THBS3-201ENST00000368378 CHRNDQ07001 517 aa10.04□□□□□ -0.8
THBS3-201ENST00000368378 LONRF2Q1L5Z9 754 aa10.04□□□□□ -0.8
THBS3-201ENST00000368378 PNKPQ96T60 521 aa10.04□□□□□ -0.8
THBS3-201ENST00000368378 PLA2G12BQ9BX93 195 aa10.04□□□□□ -0.8
THBS3-201ENST00000368378 L2HGDHQ9H9P8 463 aa10.04□□□□□ -0.8
THBS3-201ENST00000368378 SAP30BPQ9UHR5 308 aaKnown RBP10.04□□□□□ -0.8
THBS3-201ENST00000368378 MAGEB6P1A0A0J9YX57 407 aa10.03□□□□□ -0.8
THBS3-201ENST00000368378 TCRBV5S4A2TA0A5A2 114 aa10.03□□□□□ -0.8
THBS3-201ENST00000368378 H3BQF6 201 aa10.03□□□□□ -0.8
THBS3-201ENST00000368378 DEXIO95424 95 aa10.03□□□□□ -0.8
THBS3-201ENST00000368378 TBC1D8O95759 1140 aa10.03□□□□□ -0.8
THBS3-201ENST00000368378 UQCRFS1P1P0C7P4 283 aa10.03□□□□□ -0.8
THBS3-201ENST00000368378 IBSPP21815 317 aaPredicted RBP10.03□□□□□ -0.8
THBS3-201ENST00000368378 KLK7P49862 253 aa10.03□□□□□ -0.8
THBS3-201ENST00000368378 EIF6P56537 245 aaKnown RBP10.03□□□□□ -0.8
THBS3-201ENST00000368378 SF3A3Q12874 501 aaKnown RBP eCLIP10.03□□□□□ -0.8
THBS3-201ENST00000368378 CATIPQ7Z7H3 387 aa10.03□□□□□ -0.8
THBS3-201ENST00000368378 GOLGA1Q92805 767 aa10.03□□□□□ -0.8
THBS3-201ENST00000368378 SHISA4Q96DD7 197 aa10.03□□□□□ -0.8
THBS3-201ENST00000368378 DYNLL2Q96FJ2 89 aa10.03□□□□□ -0.8
THBS3-201ENST00000368378 PAGE5Q96GU1 130 aa10.03□□□□□ -0.8
THBS3-201ENST00000368378 SPEF2Q9C093 1822 aa10.03□□□□□ -0.8
THBS3-201ENST00000368378 CAPN2P17655 700 aa10.03□□□□□ -0.8
THBS3-201ENST00000368378 PTPREP23469 700 aa10.03□□□□□ -0.8
THBS3-201ENST00000368378 CXCR5P32302 372 aa10.03□□□□□ -0.8
THBS3-201ENST00000368378 RAD51AP2Q09MP3 1159 aa10.03□□□□□ -0.8
THBS3-201ENST00000368378 CCDC93Q567U6 631 aa10.03□□□□□ -0.8
THBS3-201ENST00000368378 CCDC178Q5BJE1 867 aa10.03□□□□□ -0.8
THBS3-201ENST00000368378 RILPL1Q5EBL4 403 aa10.03□□□□□ -0.8
THBS3-201ENST00000368378 ENAHQ8N8S7 591 aaPredicted RBP10.03□□□□□ -0.8
THBS3-201ENST00000368378 NOA1Q8NC60 698 aaKnown RBP10.03□□□□□ -0.8
THBS3-201ENST00000368378 SLC44A5Q8NCS7 719 aa10.03□□□□□ -0.8
THBS3-201ENST00000368378 KANSL2Q9H9L4 492 aa10.03□□□□□ -0.8
THBS3-201ENST00000368378 ABCB6Q9NP58 842 aa10.03□□□□□ -0.8
THBS3-201ENST00000368378 SMARCAL1Q9NZC9 954 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms