RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 XAGE2Q96GT9 111 aa13.06□□□□□ -0.32
PRKN-206ENST00000366898 TUBB2BQ9BVA1 445 aa13.06□□□□□ -0.32
PRKN-206ENST00000366898 VPS16Q9H269 839 aa13.06□□□□□ -0.32
PRKN-206ENST00000366898 TXNDC9O14530 226 aa13.06□□□□□ -0.32
PRKN-206ENST00000366898 MYBL1P10243 752 aa13.06□□□□□ -0.32
PRKN-206ENST00000366898 MRPS25P82663 173 aaKnown RBP13.06□□□□□ -0.32
PRKN-206ENST00000366898 NECTIN1Q15223 517 aa13.06□□□□□ -0.32
PRKN-206ENST00000366898 KRT71Q3SY84 523 aa13.06□□□□□ -0.32
PRKN-206ENST00000366898 SH2D4BQ5SQS7 431 aa13.06□□□□□ -0.32
PRKN-206ENST00000366898 TRIM7Q9C029 511 aa13.06□□□□□ -0.32
PRKN-206ENST00000366898 NAPBQ9H115 298 aa13.06□□□□□ -0.32
PRKN-206ENST00000366898 TTF2Q9UNY4 1162 aaKnown RBP13.06□□□□□ -0.32
PRKN-206ENST00000366898 SAR1BQ9Y6B6 198 aa13.06□□□□□ -0.32
PRKN-206ENST00000366898 PHLPP2Q6ZVD8 1323 aa13.05□□□□□ -0.32
PRKN-206ENST00000366898 A0A1W2PRG0 241 aa13.05□□□□□ -0.32
PRKN-206ENST00000366898 PRC1O43663 620 aa13.05□□□□□ -0.32
PRKN-206ENST00000366898 N4BP1O75113 896 aaKnown RBP13.05□□□□□ -0.32
PRKN-206ENST00000366898 CA8P35219 290 aa13.05□□□□□ -0.32
PRKN-206ENST00000366898 ZAP70P43403 619 aa13.05□□□□□ -0.32
PRKN-206ENST00000366898 VPS41P49754 854 aa13.05□□□□□ -0.32
PRKN-206ENST00000366898 SLC35F6Q8N357 371 aa13.05□□□□□ -0.32
PRKN-206ENST00000366898 PCDH11XQ9BZA7 1347 aa13.05□□□□□ -0.32
PRKN-206ENST00000366898 PCDH11YQ9BZA8 1340 aa13.05□□□□□ -0.32
PRKN-206ENST00000366898 NCOA3Q9Y6Q9 1424 aa13.05□□□□□ -0.32
PRKN-206ENST00000366898 GOLGA8KD6RF30 607 aa13.05□□□□□ -0.32
PRKN-206ENST00000366898 TRAF1Q13077 416 aa13.05□□□□□ -0.32
PRKN-206ENST00000366898 FAM133BQ5BKY9 247 aaKnown RBP13.05□□□□□ -0.32
PRKN-206ENST00000366898 TMCO4Q5TGY1 634 aa13.05□□□□□ -0.32
PRKN-206ENST00000366898 CNGA4Q8IV77 575 aa13.05□□□□□ -0.32
PRKN-206ENST00000366898 FANCLQ9NW38 375 aa13.05□□□□□ -0.32
PRKN-206ENST00000366898 TULP2O00295 520 aa13.05□□□□□ -0.32
PRKN-206ENST00000366898 INF2Q27J81 1249 aa13.05□□□□□ -0.32
PRKN-206ENST00000366898 KCNV2Q8TDN2 545 aa13.05□□□□□ -0.32
PRKN-206ENST00000366898 ZMAT2Q96NC0 199 aaKnown RBP13.05□□□□□ -0.32
PRKN-206ENST00000366898 TRIM31Q9BZY9 425 aa13.05□□□□□ -0.32
PRKN-206ENST00000366898 PRM3Q9NNZ6 103 aa13.05□□□□□ -0.32
PRKN-206ENST00000366898 CNGA1P29973 690 aa13.04□□□□□ -0.32
PRKN-206ENST00000366898 KRT9P35527 623 aa13.04□□□□□ -0.32
PRKN-206ENST00000366898 EGFL6Q8IUX8 553 aa13.04□□□□□ -0.32
PRKN-206ENST00000366898 RIN2Q8WYP3 895 aaPredicted RBP13.04□□□□□ -0.32
PRKN-206ENST00000366898 COPRSQ9NQ92 184 aa13.04□□□□□ -0.32
PRKN-206ENST00000366898 GPHNQ9NQX3 736 aaPredicted RBP13.04□□□□□ -0.32
PRKN-206ENST00000366898 IRS4O14654 1257 aaPredicted RBP13.04□□□□□ -0.32
PRKN-206ENST00000366898 RRAGBQ5VZM2 374 aa13.04□□□□□ -0.32
PRKN-206ENST00000366898 SPTY2D1Q68D10 685 aaPredicted RBP13.04□□□□□ -0.32
PRKN-206ENST00000366898 ARL10Q8N8L6 244 aa13.04□□□□□ -0.32
PRKN-206ENST00000366898 SUGCTQ9HAC7 445 aa13.04□□□□□ -0.32
PRKN-206ENST00000366898 CCDC25Q86WR0 208 aa13.04□□□□□ -0.32
PRKN-206ENST00000366898 NAP1L3Q99457 506 aaPredicted RBP13.04□□□□□ -0.32
PRKN-206ENST00000366898 CARD10Q9BWT7 1032 aa13.04□□□□□ -0.32
PRKN-206ENST00000366898 UBXN1Q04323 297 aa13.03□□□□□ -0.32
PRKN-206ENST00000366898 MIGA1Q8NAN2 632 aa13.03□□□□□ -0.32
PRKN-206ENST00000366898 KAZALD1Q96I82 304 aa13.03□□□□□ -0.32
PRKN-206ENST00000366898 TTC14Q96N46 770 aa13.03□□□□□ -0.32
PRKN-206ENST00000366898 ZKSCAN3Q9BRR0 538 aa13.03□□□□□ -0.32
PRKN-206ENST00000366898 MYL10Q9BUA6 226 aa13.03□□□□□ -0.32
PRKN-206ENST00000366898 TM6SF1Q9BZW5 370 aa13.03□□□□□ -0.32
PRKN-206ENST00000366898 SALL3Q9BXA9 1300 aa13.03□□□□□ -0.32
PRKN-206ENST00000366898 IFIT3O14879 490 aaKnown RBP13.03□□□□□ -0.32
PRKN-206ENST00000366898 OPHN1O60890 802 aa13.03□□□□□ -0.32
PRKN-206ENST00000366898 TADA3O75528 432 aa13.03□□□□□ -0.32
PRKN-206ENST00000366898 ITGA6P23229 1130 aa13.03□□□□□ -0.32
PRKN-206ENST00000366898 PARP9Q8IXQ6 854 aa13.03□□□□□ -0.32
PRKN-206ENST00000366898 MGARPQ8TDB4 240 aa13.03□□□□□ -0.32
PRKN-206ENST00000366898 CTNNBL1Q8WYA6 563 aaPredicted RBP13.03□□□□□ -0.32
PRKN-206ENST00000366898 CTAGE1Q96RT6 745 aa13.03□□□□□ -0.32
PRKN-206ENST00000366898 VCX3BQ9H321 246 aa13.03□□□□□ -0.32
PRKN-206ENST00000366898 VCX3AQ9NNX9 186 aa13.03□□□□□ -0.32
PRKN-206ENST00000366898 ZPR1O75312 459 aa13.03□□□□□ -0.32
PRKN-206ENST00000366898 DESP17661 470 aa13.03□□□□□ -0.32
PRKN-206ENST00000366898 PDCD2Q16342 344 aaPredicted RBP13.03□□□□□ -0.32
PRKN-206ENST00000366898 KLHL7Q8IXQ5 586 aa13.03□□□□□ -0.32
PRKN-206ENST00000366898 NOP53Q9NZM5 478 aaKnown RBP13.03□□□□□ -0.32
PRKN-206ENST00000366898 ARID5AQ03989 594 aa13.02□□□□□ -0.32
PRKN-206ENST00000366898 KIAA0753Q2KHM9 967 aa13.02□□□□□ -0.32
PRKN-206ENST00000366898 NCOA7Q8NI08 942 aa13.02□□□□□ -0.32
PRKN-206ENST00000366898 SLAIN2Q9P270 581 aa13.02□□□□□ -0.32
PRKN-206ENST00000366898 JAG2Q9Y219 1238 aa13.02□□□□□ -0.32
PRKN-206ENST00000366898 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.02□□□□□ -0.32
PRKN-206ENST00000366898 CDKL5O76039 1030 aa13.02□□□□□ -0.32
PRKN-206ENST00000366898 HNRNPCP07910 306 aaKnown RBP eCLIP13.02□□□□□ -0.32
PRKN-206ENST00000366898 SOGA3Q5TF21 947 aa13.02□□□□□ -0.32
PRKN-206ENST00000366898 RUFY4Q6ZNE9 571 aa13.02□□□□□ -0.32
PRKN-206ENST00000366898 DZIP3Q86Y13 1208 aaKnown RBP13.02□□□□□ -0.32
PRKN-206ENST00000366898 IFT20Q8IY31 132 aa13.02□□□□□ -0.32
PRKN-206ENST00000366898 SPDYE1Q8NFV5 336 aaPredicted RBP13.02□□□□□ -0.32
PRKN-206ENST00000366898 ZNF711Q9Y462 761 aa13.02□□□□□ -0.32
PRKN-206ENST00000366898 ADGRL3Q9HAR2 1447 aa13.02□□□□□ -0.33
PRKN-206ENST00000366898 E7EWF7 191 aa13.02□□□□□ -0.33
PRKN-206ENST00000366898 SNAP23O00161 211 aa13.02□□□□□ -0.33
PRKN-206ENST00000366898 RAD21O60216 631 aa13.02□□□□□ -0.33
PRKN-206ENST00000366898 ZNF202O95125 648 aa13.02□□□□□ -0.33
PRKN-206ENST00000366898 GGCXP38435 758 aa13.02□□□□□ -0.33
PRKN-206ENST00000366898 IGHMBP2P38935 993 aaKnown RBP13.02□□□□□ -0.33
PRKN-206ENST00000366898 ARMC3Q5W041 872 aa13.02□□□□□ -0.33
PRKN-206ENST00000366898 CLEC17AQ6ZS10 378 aa13.02□□□□□ -0.33
PRKN-206ENST00000366898 CCDC24Q8N4L8 307 aa13.02□□□□□ -0.33
PRKN-206ENST00000366898 KLHL29Q96CT2 875 aa13.02□□□□□ -0.33
PRKN-206ENST00000366898 TRIM47Q96LD4 638 aa13.02□□□□□ -0.33
PRKN-206ENST00000366898 CHCHD3Q9NX63 227 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms