RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 PFDN1O60925 122 aa17.34■□□□□ 0.37
FBXO28-201ENST00000366862 KRT5P13647 590 aa17.34■□□□□ 0.37
FBXO28-201ENST00000366862 PLCG2P16885 1265 aa17.34■□□□□ 0.37
FBXO28-201ENST00000366862 CCHCR1Q8TD31 782 aa17.34■□□□□ 0.37
FBXO28-201ENST00000366862 GRK7Q8WTQ7 553 aa17.34■□□□□ 0.37
FBXO28-201ENST00000366862 ZWINTO95229 277 aa17.34■□□□□ 0.37
FBXO28-201ENST00000366862 BCRP11274 1271 aa17.34■□□□□ 0.37
FBXO28-201ENST00000366862 MRPL12P52815 198 aaKnown RBP17.34■□□□□ 0.37
FBXO28-201ENST00000366862 SLMAPQ14BN4 828 aa17.34■□□□□ 0.37
FBXO28-201ENST00000366862 CABP7Q86V35 215 aa17.34■□□□□ 0.37
FBXO28-201ENST00000366862 CCDC13Q8IYE1 715 aa17.34■□□□□ 0.37
FBXO28-201ENST00000366862 CNOT10Q9H9A5 744 aaKnown RBP17.34■□□□□ 0.37
FBXO28-201ENST00000366862 PDE1CQ14123 709 aaPredicted RBP17.33■□□□□ 0.36
FBXO28-201ENST00000366862 SSH3Q8TE77 659 aa17.33■□□□□ 0.36
FBXO28-201ENST00000366862 LRWD1Q9UFC0 647 aa17.33■□□□□ 0.36
FBXO28-201ENST00000366862 ADAM21Q9UKJ8 722 aa17.33■□□□□ 0.36
FBXO28-201ENST00000366862 GRIN2AQ12879 1464 aa17.33■□□□□ 0.36
FBXO28-201ENST00000366862 INTS9Q9NV88 658 aaKnown RBP17.33■□□□□ 0.36
FBXO28-201ENST00000366862 RNF14Q9UBS8 474 aa17.33■□□□□ 0.36
FBXO28-201ENST00000366862 IQSEC3Q9UPP2 1182 aaPredicted RBP17.33■□□□□ 0.36
FBXO28-201ENST00000366862 SBNO1A3KN83 1393 aa17.33■□□□□ 0.36
FBXO28-201ENST00000366862 RNASELQ05823 741 aaKnown RBP17.33■□□□□ 0.36
FBXO28-201ENST00000366862 SARM1Q6SZW1 724 aa17.33■□□□□ 0.36
FBXO28-201ENST00000366862 TYW1Q9NV66 732 aaKnown RBP17.33■□□□□ 0.36
FBXO28-201ENST00000366862 STAP2Q9UGK3 403 aa17.33■□□□□ 0.36
FBXO28-201ENST00000366862 CHUKO15111 745 aa17.32■□□□□ 0.36
FBXO28-201ENST00000366862 CASP14P31944 242 aa17.32■□□□□ 0.36
FBXO28-201ENST00000366862 PLEKHA4Q9H4M7 779 aa17.32■□□□□ 0.36
FBXO28-201ENST00000366862 PPP1R9AQ9ULJ8 1098 aa17.32■□□□□ 0.36
FBXO28-201ENST00000366862 KCNJ14Q9UNX9 436 aa17.32■□□□□ 0.36
FBXO28-201ENST00000366862 RAPGEF6Q8TEU7 1601 aa17.32■□□□□ 0.36
FBXO28-201ENST00000366862 TBC1D8O95759 1140 aa17.32■□□□□ 0.36
FBXO28-201ENST00000366862 ERCC3P19447 782 aa17.32■□□□□ 0.36
FBXO28-201ENST00000366862 GUCY2CP25092 1073 aa17.32■□□□□ 0.36
FBXO28-201ENST00000366862 COG7P83436 770 aa17.32■□□□□ 0.36
FBXO28-201ENST00000366862 RAD51AP2Q09MP3 1159 aa17.32■□□□□ 0.36
FBXO28-201ENST00000366862 NONOQ15233 471 aaKnown RBP eCLIP17.32■□□□□ 0.36
FBXO28-201ENST00000366862 METTL22Q9BUU2 404 aaPredicted RBP17.32■□□□□ 0.36
FBXO28-201ENST00000366862 LSG1Q9H089 658 aaKnown RBP17.32■□□□□ 0.36
FBXO28-201ENST00000366862 FAF1Q9UNN5 650 aaPredicted RBP17.32■□□□□ 0.36
FBXO28-201ENST00000366862 C6orf229H3BNL8 230 aa17.32■□□□□ 0.36
FBXO28-201ENST00000366862 GTPBP6O43824 516 aaPredicted RBP17.32■□□□□ 0.36
FBXO28-201ENST00000366862 COPB1P53618 953 aaKnown RBP17.32■□□□□ 0.36
FBXO28-201ENST00000366862 RILPQ96NA2 401 aa17.32■□□□□ 0.36
FBXO28-201ENST00000366862 RUNDC3BQ96NL0 473 aa17.32■□□□□ 0.36
FBXO28-201ENST00000366862 GLT8D2Q9H1C3 349 aa17.32■□□□□ 0.36
FBXO28-201ENST00000366862 VPS37BQ9H9H4 285 aa17.32■□□□□ 0.36
FBXO28-201ENST00000366862 URB2Q14146 1524 aaKnown RBP17.32■□□□□ 0.36
FBXO28-201ENST00000366862 USP19O94966 1318 aa17.32■□□□□ 0.36
FBXO28-201ENST00000366862 KIF1CO43896 1103 aaKnown RBP17.32■□□□□ 0.36
FBXO28-201ENST00000366862 DTNBO60941 627 aa17.32■□□□□ 0.36
FBXO28-201ENST00000366862 PPP6R2O75170 966 aa17.32■□□□□ 0.36
FBXO28-201ENST00000366862 TIMM10P62072 90 aa17.32■□□□□ 0.36
FBXO28-201ENST00000366862 NLRC4Q9NPP4 1024 aa17.32■□□□□ 0.36
FBXO28-201ENST00000366862 CD109Q6YHK3 1445 aa17.32■□□□□ 0.36
FBXO28-201ENST00000366862 EIF3CLB5ME19 914 aaKnown RBP17.31■□□□□ 0.36
FBXO28-201ENST00000366862 TCP11Q8WWU5 503 aa17.31■□□□□ 0.36
FBXO28-201ENST00000366862 EYA1Q99502 592 aa17.31■□□□□ 0.36
FBXO28-201ENST00000366862 EIF3CQ99613 913 aaKnown RBP17.31■□□□□ 0.36
FBXO28-201ENST00000366862 LSM14BQ9BX40 385 aaKnown RBP17.31■□□□□ 0.36
FBXO28-201ENST00000366862 TRIM37O94972 964 aa17.31■□□□□ 0.36
FBXO28-201ENST00000366862 TXKP42681 527 aa17.31■□□□□ 0.36
FBXO28-201ENST00000366862 MIER3Q7Z3K6 550 aa17.31■□□□□ 0.36
FBXO28-201ENST00000366862 TSPYL2Q9H2G4 693 aaPredicted RBP17.31■□□□□ 0.36
FBXO28-201ENST00000366862 FBXO31Q5XUX0 539 aaPredicted RBP17.31■□□□□ 0.36
FBXO28-201ENST00000366862 SPATA31E1Q6ZUB1 1445 aa17.31■□□□□ 0.36
FBXO28-201ENST00000366862 ST5P78524 1137 aa17.31■□□□□ 0.36
FBXO28-201ENST00000366862 ZBTB17Q13105 803 aa17.31■□□□□ 0.36
FBXO28-201ENST00000366862 VSTM4Q8IW00 320 aa17.31■□□□□ 0.36
FBXO28-201ENST00000366862 ABCB6Q9NP58 842 aa17.31■□□□□ 0.36
FBXO28-201ENST00000366862 PHBP35232 272 aa17.31■□□□□ 0.36
FBXO28-201ENST00000366862 NNTQ13423 1086 aa17.31■□□□□ 0.36
FBXO28-201ENST00000366862 LRRC23Q53EV4 343 aaPredicted RBP17.31■□□□□ 0.36
FBXO28-201ENST00000366862 SCOCQ9UIL1 159 aa17.31■□□□□ 0.36
FBXO28-201ENST00000366862 BUB1O43683 1085 aa17.3■□□□□ 0.36
FBXO28-201ENST00000366862 HERC4Q5GLZ8 1057 aaPredicted RBP17.3■□□□□ 0.36
FBXO28-201ENST00000366862 GSDMBQ8TAX9 411 aa17.3■□□□□ 0.36
FBXO28-201ENST00000366862 SNX29Q8TEQ0 813 aa17.3■□□□□ 0.36
FBXO28-201ENST00000366862 PPP1R21Q6ZMI0 780 aa17.3■□□□□ 0.36
FBXO28-201ENST00000366862 DPH5Q9H2P9 285 aa17.3■□□□□ 0.36
FBXO28-201ENST00000366862 POLR3EQ9NVU0 708 aa17.3■□□□□ 0.36
FBXO28-201ENST00000366862 A2MP01023 1474 aa17.3■□□□□ 0.36
FBXO28-201ENST00000366862 ARHGAP42A6NI28 874 aa17.3■□□□□ 0.36
FBXO28-201ENST00000366862 BAG2O95816 211 aa17.3■□□□□ 0.36
FBXO28-201ENST00000366862 SESN3P58005 492 aa17.3■□□□□ 0.36
FBXO28-201ENST00000366862 STAMQ92783 540 aa17.3■□□□□ 0.36
FBXO28-201ENST00000366862 SUDS3Q9H7L9 328 aaPredicted RBP17.3■□□□□ 0.36
FBXO28-201ENST00000366862 ZMYM6O95789 1325 aa17.3■□□□□ 0.36
FBXO28-201ENST00000366862 DPCR1Q3MIW9 517 aa17.3■□□□□ 0.36
FBXO28-201ENST00000366862 RETREG2Q8NC44 543 aa17.3■□□□□ 0.36
FBXO28-201ENST00000366862 CFAP61Q8NHU2 1237 aa17.3■□□□□ 0.36
FBXO28-201ENST00000366862 BBOF1Q8ND07 529 aa17.29■□□□□ 0.36
FBXO28-201ENST00000366862 XAGE2Q96GT9 111 aa17.29■□□□□ 0.36
FBXO28-201ENST00000366862 CLIC4Q9Y696 253 aa17.29■□□□□ 0.36
FBXO28-201ENST00000366862 TAF11Q15544 211 aa17.29■□□□□ 0.36
FBXO28-201ENST00000366862 FNBP4Q8N3X1 1017 aaPredicted RBP17.29■□□□□ 0.36
FBXO28-201ENST00000366862 GSDMAQ96QA5 445 aa17.29■□□□□ 0.36
FBXO28-201ENST00000366862 PSMD1Q99460 953 aa17.29■□□□□ 0.36
FBXO28-201ENST00000366862 RCOR1Q9UKL0 485 aa17.29■□□□□ 0.36
FBXO28-201ENST00000366862 RNMTO43148 476 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms