RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 CEP95Q96GE4 821 aa23.62■■□□□ 1.37
H3F3A-204ENST00000366816 NBPF3Q9H094 633 aa23.62■■□□□ 1.37
H3F3A-204ENST00000366816 VCPKMTQ9H867 229 aa23.62■■□□□ 1.37
H3F3A-204ENST00000366816 TXNRD2Q9NNW7 524 aa23.62■■□□□ 1.37
H3F3A-204ENST00000366816 CLIP2Q9UDT6 1046 aa23.62■■□□□ 1.37
H3F3A-204ENST00000366816 ZMYM6O95789 1325 aa23.61■■□□□ 1.37
H3F3A-204ENST00000366816 NEDD1Q8NHV4 660 aa23.61■■□□□ 1.37
H3F3A-204ENST00000366816 TANGO6Q9C0B7 1094 aa23.61■■□□□ 1.37
H3F3A-204ENST00000366816 SH2D4AQ9H788 454 aa23.61■■□□□ 1.37
H3F3A-204ENST00000366816 TOMM22Q9NS69 142 aa23.61■■□□□ 1.37
H3F3A-204ENST00000366816 RBPJLQ9UBG7 517 aa23.61■■□□□ 1.37
H3F3A-204ENST00000366816 GREB1LQ9C091 1923 aaPredicted RBP23.61■■□□□ 1.37
H3F3A-204ENST00000366816 RANBP6O60518 1105 aaKnown RBP23.6■■□□□ 1.37
H3F3A-204ENST00000366816 FAM110CQ1W6H9 321 aa23.6■■□□□ 1.37
H3F3A-204ENST00000366816 RRP12Q5JTH9 1297 aaKnown RBP23.6■■□□□ 1.37
H3F3A-204ENST00000366816 PAGR1Q9BTK6 254 aa23.6■■□□□ 1.37
H3F3A-204ENST00000366816 MTMR4Q9NYA4 1195 aa23.6■■□□□ 1.37
H3F3A-204ENST00000366816 NYAP2Q9P242 653 aa23.6■■□□□ 1.37
H3F3A-204ENST00000366816 TSPY2A6NKD2 308 aa23.59■■□□□ 1.37
H3F3A-204ENST00000366816 NMT2O60551 498 aa23.59■■□□□ 1.37
H3F3A-204ENST00000366816 FGRP09769 529 aa23.59■■□□□ 1.37
H3F3A-204ENST00000366816 FCGRTP55899 365 aa23.59■■□□□ 1.37
H3F3A-204ENST00000366816 Q3C1V9 767 aa23.59■■□□□ 1.37
H3F3A-204ENST00000366816 TBC1D10CQ8IV04 446 aa23.59■■□□□ 1.37
H3F3A-204ENST00000366816 NKX2-3Q8TAU0 364 aa23.59■■□□□ 1.37
H3F3A-204ENST00000366816 RUFY2Q8WXA3 655 aa23.59■■□□□ 1.37
H3F3A-204ENST00000366816 LPAR1Q92633 364 aa23.59■■□□□ 1.37
H3F3A-204ENST00000366816 DSCC1Q9BVC3 393 aa23.59■■□□□ 1.37
H3F3A-204ENST00000366816 PTCH2Q9Y6C5 1203 aa23.59■■□□□ 1.37
H3F3A-204ENST00000366816 ZNF213O14771 459 aa23.58■■□□□ 1.37
H3F3A-204ENST00000366816 ORC4O43929 436 aa23.58■■□□□ 1.37
H3F3A-204ENST00000366816 SAMD1Q6SPF0 538 aaPredicted RBP23.58■■□□□ 1.37
H3F3A-204ENST00000366816 GOPCQ9HD26 462 aa23.58■■□□□ 1.37
H3F3A-204ENST00000366816 IL17RBQ9NRM6 502 aa23.58■■□□□ 1.37
H3F3A-204ENST00000366816 MORF4L1Q9UBU8 362 aa23.58■■□□□ 1.37
H3F3A-204ENST00000366816 TNPO2O14787 897 aaKnown RBP23.57■■□□□ 1.36
H3F3A-204ENST00000366816 PTH1RQ03431 593 aa23.57■■□□□ 1.36
H3F3A-204ENST00000366816 AKNAD1Q5T1N1 836 aa23.57■■□□□ 1.36
H3F3A-204ENST00000366816 LRRC47Q8N1G4 583 aaKnown RBP23.57■■□□□ 1.36
H3F3A-204ENST00000366816 GPRC5AQ8NFJ5 357 aa23.57■■□□□ 1.36
H3F3A-204ENST00000366816 NUP88Q99567 741 aaPredicted RBP23.57■■□□□ 1.36
H3F3A-204ENST00000366816 SRRDQ9UH36 339 aa23.57■■□□□ 1.36
H3F3A-204ENST00000366816 GABRQQ9UN88 632 aa23.57■■□□□ 1.36
H3F3A-204ENST00000366816 PLIN4Q96Q06 1357 aa23.56■■□□□ 1.36
H3F3A-204ENST00000366816 SPDYE16A6NNV3 312 aaPredicted RBP23.56■■□□□ 1.36
H3F3A-204ENST00000366816 F5H6K3 240 aa23.56■■□□□ 1.36
H3F3A-204ENST00000366816 CNMDO75829 334 aa23.56■■□□□ 1.36
H3F3A-204ENST00000366816 TTLL1O95922 423 aa23.56■■□□□ 1.36
H3F3A-204ENST00000366816 GNRH1P01148 92 aa23.56■■□□□ 1.36
H3F3A-204ENST00000366816 PRKCZQ05513 592 aa23.56■■□□□ 1.36
H3F3A-204ENST00000366816 KLRC3Q07444 240 aa23.56■■□□□ 1.36
H3F3A-204ENST00000366816 COG2Q14746 738 aa23.56■■□□□ 1.36
H3F3A-204ENST00000366816 FAM83BQ5T0W9 1011 aa23.56■■□□□ 1.36
H3F3A-204ENST00000366816 MFSD6Q6ZSS7 791 aa23.56■■□□□ 1.36
H3F3A-204ENST00000366816 CHMP4CQ96CF2 233 aa23.56■■□□□ 1.36
H3F3A-204ENST00000366816 RAD50Q92878 1312 aa23.56■■□□□ 1.36
H3F3A-204ENST00000366816 WDR46O15213 610 aaKnown RBP23.55■■□□□ 1.36
H3F3A-204ENST00000366816 SGSM2O43147 1006 aa23.55■■□□□ 1.36
H3F3A-204ENST00000366816 FLOT1O75955 427 aa23.55■■□□□ 1.36
H3F3A-204ENST00000366816 HOXD10P28358 340 aa23.55■■□□□ 1.36
H3F3A-204ENST00000366816 ERVK-9P63128 1117 aa23.55■■□□□ 1.36
H3F3A-204ENST00000366816 ERVK-24P63145 666 aa23.55■■□□□ 1.36
H3F3A-204ENST00000366816 STAG1Q8WVM7 1258 aa23.55■■□□□ 1.36
H3F3A-204ENST00000366816 MKL1Q969V6 931 aa23.55■■□□□ 1.36
H3F3A-204ENST00000366816 FBXO28Q9NVF7 368 aa23.55■■□□□ 1.36
H3F3A-204ENST00000366816 PPP4R2Q9NY27 417 aa23.55■■□□□ 1.36
H3F3A-204ENST00000366816 BTBD7Q9P203 1132 aa23.55■■□□□ 1.36
H3F3A-204ENST00000366816 MYPNQ86TC9 1320 aa23.55■■□□□ 1.36
H3F3A-204ENST00000366816 NDUFB10O96000 172 aa23.54■■□□□ 1.36
H3F3A-204ENST00000366816 BMP2KLQ5H9B9 411 aa23.54■■□□□ 1.36
H3F3A-204ENST00000366816 PORCNQ9H237 461 aa23.54■■□□□ 1.36
H3F3A-204ENST00000366816 HOXC10Q9NYD6 342 aa23.54■■□□□ 1.36
H3F3A-204ENST00000366816 CTNNA3Q9UI47 895 aa23.54■■□□□ 1.36
H3F3A-204ENST00000366816 STX8Q9UNK0 236 aa23.54■■□□□ 1.36
H3F3A-204ENST00000366816 HTTP42858 3142 aa23.54■■□□□ 1.36
H3F3A-204ENST00000366816 NEDD4P46934 1319 aa23.54■■□□□ 1.36
H3F3A-204ENST00000366816 DSG3P32926 999 aa23.53■■□□□ 1.36
H3F3A-204ENST00000366816 IMMTQ16891 758 aaKnown RBP23.53■■□□□ 1.36
H3F3A-204ENST00000366816 LBX2Q6XYB7 198 aa23.53■■□□□ 1.36
H3F3A-204ENST00000366816 GTF3C2Q8WUA4 911 aaPredicted RBP23.53■■□□□ 1.36
H3F3A-204ENST00000366816 ATG4CQ96DT6 458 aa23.53■■□□□ 1.36
H3F3A-204ENST00000366816 RABGAP1Q9Y3P9 1069 aa23.53■■□□□ 1.36
H3F3A-204ENST00000366816 MGAMO43451 1857 aa23.53■■□□□ 1.36
H3F3A-204ENST00000366816 FLT3LGP49771 235 aa23.52■■□□□ 1.36
H3F3A-204ENST00000366816 RAET1EQ8TD07 263 aa23.52■■□□□ 1.36
H3F3A-204ENST00000366816 SH3TC2Q8TF17 1288 aa23.52■■□□□ 1.36
H3F3A-204ENST00000366816 COA7Q96BR5 231 aa23.52■■□□□ 1.36
H3F3A-204ENST00000366816 RNF41Q9H4P4 317 aaPredicted RBP23.52■■□□□ 1.36
H3F3A-204ENST00000366816 PRMT2P55345 433 aa23.51■■□□□ 1.35
H3F3A-204ENST00000366816 SLC9C1Q4G0N8 1177 aa23.51■■□□□ 1.35
H3F3A-204ENST00000366816 MYH4Q9Y623 1939 aa23.51■■□□□ 1.35
H3F3A-204ENST00000366816 MYCP01106 439 aaPredicted RBP23.5■■□□□ 1.35
H3F3A-204ENST00000366816 ERICH6BQ5W0A0 696 aa23.5■■□□□ 1.35
H3F3A-204ENST00000366816 SLFN13Q68D06 897 aa23.5■■□□□ 1.35
H3F3A-204ENST00000366816 CCAR1Q8IX12 1150 aaKnown RBP23.5■■□□□ 1.35
H3F3A-204ENST00000366816 ZKSCAN3Q9BRR0 538 aa23.5■■□□□ 1.35
H3F3A-204ENST00000366816 MTMR7Q9Y216 660 aa23.5■■□□□ 1.35
H3F3A-204ENST00000366816 RLFQ13129 1914 aa23.5■■□□□ 1.35
H3F3A-204ENST00000366816 B4E1Z4 1266 aa23.49■■□□□ 1.35
H3F3A-204ENST00000366816 PCP11498 1178 aaKnown RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms