RNA–Protein interactions for RNA: ENST00000366496.6

NLRP3-203, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-203ENST00000366496 TNS3Q68CZ2 1445 aa9.3□□□□□ -0.92
NLRP3-203ENST00000366496 GOLGA8AA7E2F4 631 aa9.3□□□□□ -0.92
NLRP3-203ENST00000366496 AKR1B15C9JRZ8 316 aaPredicted RBP9.3□□□□□ -0.92
NLRP3-203ENST00000366496 GPAA1O43292 621 aa9.3□□□□□ -0.92
NLRP3-203ENST00000366496 ATP2C2O75185 946 aa9.3□□□□□ -0.92
NLRP3-203ENST00000366496 PRDM1O75626 825 aa9.3□□□□□ -0.92
NLRP3-203ENST00000366496 MBD4O95243 580 aa9.3□□□□□ -0.92
NLRP3-203ENST00000366496 RPS6KB1P23443 525 aa9.3□□□□□ -0.92
NLRP3-203ENST00000366496 AARSP49588 968 aaKnown RBP eCLIP9.3□□□□□ -0.92
NLRP3-203ENST00000366496 RESTQ13127 1097 aa9.3□□□□□ -0.92
NLRP3-203ENST00000366496 PDIA6Q15084 440 aa9.3□□□□□ -0.92
NLRP3-203ENST00000366496 NCOA7Q8NI08 942 aa9.3□□□□□ -0.92
NLRP3-203ENST00000366496 KCNG4Q8TDN1 519 aa9.3□□□□□ -0.92
NLRP3-203ENST00000366496 ZNF483Q8TF39 744 aaPredicted RBP9.3□□□□□ -0.92
NLRP3-203ENST00000366496 PIK3R5Q8WYR1 880 aa9.3□□□□□ -0.92
NLRP3-203ENST00000366496 NLRP3Q96P20 1036 aa9.3□□□□□ -0.92
NLRP3-203ENST00000366496 ARMT1Q9H993 441 aa9.3□□□□□ -0.92
NLRP3-203ENST00000366496 RCOR1Q9UKL0 485 aa9.3□□□□□ -0.92
NLRP3-203ENST00000366496 HPCAL4Q9UM19 191 aa9.3□□□□□ -0.92
NLRP3-203ENST00000366496 F8W031 263 aaPredicted RBP9.29□□□□□ -0.92
NLRP3-203ENST00000366496 ATP1A3P13637 1013 aa9.29□□□□□ -0.92
NLRP3-203ENST00000366496 TRIM22Q8IYM9 498 aa9.29□□□□□ -0.92
NLRP3-203ENST00000366496 CPLX3Q8WVH0 158 aa9.29□□□□□ -0.92
NLRP3-203ENST00000366496 RIN2Q8WYP3 895 aaPredicted RBP9.29□□□□□ -0.92
NLRP3-203ENST00000366496 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.29□□□□□ -0.92
NLRP3-203ENST00000366496 SLC12A7Q9Y666 1083 aa9.29□□□□□ -0.92
NLRP3-203ENST00000366496 PXDNQ92626 1479 aa9.29□□□□□ -0.92
NLRP3-203ENST00000366496 B4E1Z4 1266 aa9.29□□□□□ -0.92
NLRP3-203ENST00000366496 PDE8AO60658 829 aa9.29□□□□□ -0.92
NLRP3-203ENST00000366496 CRKLP46109 303 aaKnown RBP9.29□□□□□ -0.92
NLRP3-203ENST00000366496 TBC1D8BQ0IIM8 1120 aa9.29□□□□□ -0.92
NLRP3-203ENST00000366496 HSP90AA4PQ58FG1 418 aa9.29□□□□□ -0.92
NLRP3-203ENST00000366496 KIRREL3Q8IZU9 778 aa9.29□□□□□ -0.92
NLRP3-203ENST00000366496 CCDC47Q96A33 483 aaKnown RBP9.29□□□□□ -0.92
NLRP3-203ENST00000366496 GOLPH3LQ9H4A5 285 aa9.29□□□□□ -0.92
NLRP3-203ENST00000366496 SLC40A1Q9NP59 571 aa9.29□□□□□ -0.92
NLRP3-203ENST00000366496 CCNL1Q9UK58 526 aaPredicted RBP9.29□□□□□ -0.92
NLRP3-203ENST00000366496 PTPDC1A2A3K4 754 aa9.29□□□□□ -0.92
NLRP3-203ENST00000366496 PFKFB2O60825 505 aa9.29□□□□□ -0.92
NLRP3-203ENST00000366496 PHKA1P46020 1223 aa9.29□□□□□ -0.92
NLRP3-203ENST00000366496 RBM5P52756 815 aaKnown RBP eCLIP9.29□□□□□ -0.92
NLRP3-203ENST00000366496 DRP2Q13474 957 aa9.29□□□□□ -0.92
NLRP3-203ENST00000366496 SLMAPQ14BN4 828 aa9.29□□□□□ -0.92
NLRP3-203ENST00000366496 DHX32Q7L7V1 743 aaKnown RBP9.29□□□□□ -0.92
NLRP3-203ENST00000366496 ZBTB38Q8NAP3 1195 aaPredicted RBP9.29□□□□□ -0.92
NLRP3-203ENST00000366496 KIFC2Q96AC6 838 aa9.29□□□□□ -0.92
NLRP3-203ENST00000366496 NAA15Q9BXJ9 866 aaKnown RBP9.29□□□□□ -0.92
NLRP3-203ENST00000366496 SLC26A6Q9BXS9 759 aa9.29□□□□□ -0.92
NLRP3-203ENST00000366496 VCPKMTQ9H867 229 aa9.29□□□□□ -0.92
NLRP3-203ENST00000366496 HOMER3Q9NSC5 361 aa9.29□□□□□ -0.92
NLRP3-203ENST00000366496 ARHGAP23Q9P227 1491 aa9.29□□□□□ -0.92
NLRP3-203ENST00000366496 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.28□□□□□ -0.92
NLRP3-203ENST00000366496 CEMIPQ8WUJ3 1361 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 ZNF202O95125 648 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 METAP2P50579 478 aaKnown RBP eCLIP9.28□□□□□ -0.92
NLRP3-203ENST00000366496 BCAMP50895 628 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 CTSWP56202 376 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 GIGYF2Q6Y7W6 1299 aaKnown RBP9.28□□□□□ -0.92
NLRP3-203ENST00000366496 SND1Q7KZF4 910 aaKnown RBP eCLIP9.28□□□□□ -0.92
NLRP3-203ENST00000366496 SLC35F6Q8N357 371 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 DYDC1Q8WWB3 177 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 TBC1D31Q96DN5 1066 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 RPGRIP1Q96KN7 1286 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 USP28Q96RU2 1077 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 FANCLQ9NW38 375 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 ITSN1Q15811 1721 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 MAP3K15Q6ZN16 1313 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 ATXN2Q99700 1313 aaKnown RBP9.28□□□□□ -0.92
NLRP3-203ENST00000366496 PDCLQ13371 301 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 MFSD6Q6ZSS7 791 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 RPGRQ92834 1020 aaKnown RBP9.28□□□□□ -0.92
NLRP3-203ENST00000366496 HOOK2Q96ED9 719 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 THOC1Q96FV9 657 aaKnown RBP9.28□□□□□ -0.92
NLRP3-203ENST00000366496 SPAG5Q96R06 1193 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 YIPF3Q9GZM5 350 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 CHCHD3Q9NX63 227 aaKnown RBP9.28□□□□□ -0.92
NLRP3-203ENST00000366496 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.28□□□□□ -0.92
NLRP3-203ENST00000366496 SLIT1O75093 1534 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 KIF20BQ96Q89 1820 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 PECAM1P16284 738 aaPredicted RBP9.28□□□□□ -0.92
NLRP3-203ENST00000366496 GYG1P46976 350 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 ATP1A2P50993 1020 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 TTF1Q15361 905 aaPredicted RBP9.28□□□□□ -0.92
NLRP3-203ENST00000366496 WDR93Q6P2C0 686 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 CCDC13Q8IYE1 715 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 SPDYE1Q8NFV5 336 aaPredicted RBP9.28□□□□□ -0.92
NLRP3-203ENST00000366496 TCP11Q8WWU5 503 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 OSBPL9Q96SU4 736 aa9.28□□□□□ -0.92
NLRP3-203ENST00000366496 RTCBQ9Y3I0 505 aaKnown RBP9.28□□□□□ -0.92
NLRP3-203ENST00000366496 UQCRFS1P1P0C7P4 283 aa9.27□□□□□ -0.92
NLRP3-203ENST00000366496 MARCKSP29966 332 aaPredicted RBP9.27□□□□□ -0.92
NLRP3-203ENST00000366496 ADALQ6DHV7 355 aa9.27□□□□□ -0.92
NLRP3-203ENST00000366496 NAA16Q6N069 864 aaPredicted RBP9.27□□□□□ -0.92
NLRP3-203ENST00000366496 SLC30A9Q6PML9 568 aa9.27□□□□□ -0.92
NLRP3-203ENST00000366496 NLRP10Q86W26 655 aa9.27□□□□□ -0.92
NLRP3-203ENST00000366496 PARD3BQ8TEW8 1205 aa9.27□□□□□ -0.92
NLRP3-203ENST00000366496 KAZALD1Q96I82 304 aa9.27□□□□□ -0.92
NLRP3-203ENST00000366496 GPHNQ9NQX3 736 aaPredicted RBP9.27□□□□□ -0.92
NLRP3-203ENST00000366496 ZNF142P52746 1687 aaPredicted RBP9.27□□□□□ -0.93
NLRP3-203ENST00000366496 SHOX2O60902 331 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms