RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 ACBD3Q9H3P7 528 aa10.62□□□□□ -0.71
YBX3-204ENST00000366290 RGPD1P0DJD0 1748 aa10.61□□□□□ -0.71
YBX3-204ENST00000366290 GBP2P32456 591 aaPredicted RBP10.61□□□□□ -0.71
YBX3-204ENST00000366290 PCNX4Q63HM2 1172 aa10.61□□□□□ -0.71
YBX3-204ENST00000366290 TTBK2Q6IQ55 1244 aa10.61□□□□□ -0.71
YBX3-204ENST00000366290 DMRTC2Q8IXT2 367 aaPredicted RBP10.61□□□□□ -0.71
YBX3-204ENST00000366290 TCP11L2Q8N4U5 519 aa10.61□□□□□ -0.71
YBX3-204ENST00000366290 PHC3Q8NDX5 983 aa10.61□□□□□ -0.71
YBX3-204ENST00000366290 WNT8BQ93098 351 aa10.61□□□□□ -0.71
YBX3-204ENST00000366290 SPOCK3Q9BQ16 436 aa10.61□□□□□ -0.71
YBX3-204ENST00000366290 SOX17Q9H6I2 414 aaPredicted RBP10.61□□□□□ -0.71
YBX3-204ENST00000366290 NOP53Q9NZM5 478 aaKnown RBP10.61□□□□□ -0.71
YBX3-204ENST00000366290 WDR17Q8IZU2 1322 aa10.6□□□□□ -0.71
YBX3-204ENST00000366290 NME2P22392 152 aa10.6□□□□□ -0.71
YBX3-204ENST00000366290 R3HDM1Q15032 1099 aaKnown RBP10.6□□□□□ -0.71
YBX3-204ENST00000366290 SULF2Q8IWU5 870 aa10.6□□□□□ -0.71
YBX3-204ENST00000366290 DDX54Q8TDD1 881 aaKnown RBP10.6□□□□□ -0.71
YBX3-204ENST00000366290 SAMM50Q9Y512 469 aa10.6□□□□□ -0.71
YBX3-204ENST00000366290 WNK3Q9BYP7 1800 aa10.6□□□□□ -0.71
YBX3-204ENST00000366290 KIF20BQ96Q89 1820 aa10.59□□□□□ -0.71
YBX3-204ENST00000366290 MINDY4BA8MYZ0 360 aa10.59□□□□□ -0.71
YBX3-204ENST00000366290 FSCN2O14926 492 aa10.59□□□□□ -0.71
YBX3-204ENST00000366290 FYB1O15117 783 aa10.59□□□□□ -0.71
YBX3-204ENST00000366290 ARL4DP49703 201 aa10.59□□□□□ -0.71
YBX3-204ENST00000366290 GSTM4Q03013 218 aa10.59□□□□□ -0.71
YBX3-204ENST00000366290 C19orf57Q0VDD7 668 aa10.59□□□□□ -0.71
YBX3-204ENST00000366290 NAALADL2Q58DX5 795 aa10.59□□□□□ -0.71
YBX3-204ENST00000366290 STK35Q8TDR2 534 aa10.59□□□□□ -0.71
YBX3-204ENST00000366290 CARD10Q9BWT7 1032 aa10.59□□□□□ -0.71
YBX3-204ENST00000366290 OSGEPQ9NPF4 335 aa10.59□□□□□ -0.71
YBX3-204ENST00000366290 TLR6Q9Y2C9 796 aa10.59□□□□□ -0.71
YBX3-204ENST00000366290 TRIM37O94972 964 aa10.58□□□□□ -0.72
YBX3-204ENST00000366290 BMP6P22004 513 aa10.58□□□□□ -0.72
YBX3-204ENST00000366290 TNNI2P48788 182 aa10.58□□□□□ -0.72
YBX3-204ENST00000366290 RPS26P62854 115 aaKnown RBP10.58□□□□□ -0.72
YBX3-204ENST00000366290 SETDB1Q15047 1291 aa10.58□□□□□ -0.72
YBX3-204ENST00000366290 AGMOQ6ZNB7 445 aa10.58□□□□□ -0.72
YBX3-204ENST00000366290 COG3Q96JB2 828 aa10.58□□□□□ -0.72
YBX3-204ENST00000366290 RHOVQ96L33 236 aa10.58□□□□□ -0.72
YBX3-204ENST00000366290 PLVAPQ9BX97 442 aa10.58□□□□□ -0.72
YBX3-204ENST00000366290 MSTNO14793 375 aa10.57□□□□□ -0.72
YBX3-204ENST00000366290 ARNTP27540 789 aa10.57□□□□□ -0.72
YBX3-204ENST00000366290 AP3B2Q13367 1082 aa10.57□□□□□ -0.72
YBX3-204ENST00000366290 RASIP1Q5U651 963 aa10.57□□□□□ -0.72
YBX3-204ENST00000366290 ADAMTS1Q9UHI8 967 aa10.57□□□□□ -0.72
YBX3-204ENST00000366290 PEAK1Q9H792 1746 aa10.57□□□□□ -0.72
YBX3-204ENST00000366290 LRRC37A3O60309 1634 aa10.57□□□□□ -0.72
YBX3-204ENST00000366290 FAM208AQ9UK61 1670 aaKnown RBP10.57□□□□□ -0.72
YBX3-204ENST00000366290 CCDC7Q96M83 1385 aa10.56□□□□□ -0.72
YBX3-204ENST00000366290 TFE3P19532 575 aaPredicted RBP10.56□□□□□ -0.72
YBX3-204ENST00000366290 EIF4A3P38919 411 aaKnown RBP10.56□□□□□ -0.72
YBX3-204ENST00000366290 TRAPPC3LQ5T215 181 aa10.56□□□□□ -0.72
YBX3-204ENST00000366290 FAM196AQ6ZSG2 479 aa10.56□□□□□ -0.72
YBX3-204ENST00000366290 TOM1L2Q6ZVM7 507 aa10.56□□□□□ -0.72
YBX3-204ENST00000366290 KLHL23Q8NBE8 558 aa10.56□□□□□ -0.72
YBX3-204ENST00000366290 IP6K1Q92551 441 aa10.56□□□□□ -0.72
YBX3-204ENST00000366290 KLHDC7BQ96G42 594 aa10.56□□□□□ -0.72
YBX3-204ENST00000366290 TINF2Q9BSI4 451 aa10.56□□□□□ -0.72
YBX3-204ENST00000366290 EMILIN2Q9BXX0 1053 aa10.56□□□□□ -0.72
YBX3-204ENST00000366290 CBX8Q9HC52 389 aa10.56□□□□□ -0.72
YBX3-204ENST00000366290 CAPN10Q9HC96 672 aa10.56□□□□□ -0.72
YBX3-204ENST00000366290 USP35Q9P2H5 1018 aa10.56□□□□□ -0.72
YBX3-204ENST00000366290 BCL9O00512 1426 aa10.56□□□□□ -0.72
YBX3-204ENST00000366290 KIF7Q2M1P5 1343 aa10.56□□□□□ -0.72
YBX3-204ENST00000366290 RTL1A6NKG5 1358 aa10.55□□□□□ -0.72
YBX3-204ENST00000366290 KIF24Q5T7B8 1368 aa10.55□□□□□ -0.72
YBX3-204ENST00000366290 TM4SF5O14894 197 aa10.55□□□□□ -0.72
YBX3-204ENST00000366290 EIF4EBP3O60516 100 aaPredicted RBP10.55□□□□□ -0.72
YBX3-204ENST00000366290 APBA3O96018 575 aa10.55□□□□□ -0.72
YBX3-204ENST00000366290 PF4P02776 101 aa10.55□□□□□ -0.72
YBX3-204ENST00000366290 LMNB2Q03252 620 aa10.55□□□□□ -0.72
YBX3-204ENST00000366290 PDZD3Q86UT5 571 aa10.55□□□□□ -0.72
YBX3-204ENST00000366290 MAP4K3Q8IVH8 894 aa10.55□□□□□ -0.72
YBX3-204ENST00000366290 GALNT11Q8NCW6 608 aa10.55□□□□□ -0.72
YBX3-204ENST00000366290 SPON2Q9BUD6 331 aa10.55□□□□□ -0.72
YBX3-204ENST00000366290 CYP8B1Q9UNU6 501 aa10.55□□□□□ -0.72
YBX3-204ENST00000366290 INPP5FQ9Y2H2 1132 aa10.55□□□□□ -0.72
YBX3-204ENST00000366290 MAP3K19Q56UN5 1328 aa10.55□□□□□ -0.72
YBX3-204ENST00000366290 WASHC2AQ641Q2 1341 aa10.55□□□□□ -0.72
YBX3-204ENST00000366290 RREB1Q92766 1687 aa10.54□□□□□ -0.72
YBX3-204ENST00000366290 DEAF1O75398 565 aaPredicted RBP10.54□□□□□ -0.72
YBX3-204ENST00000366290 CHRNA4P43681 627 aa10.54□□□□□ -0.72
YBX3-204ENST00000366290 FAM160A1Q05DH4 1040 aa10.54□□□□□ -0.72
YBX3-204ENST00000366290 CAMK2GQ13555 558 aaPredicted RBP10.54□□□□□ -0.72
YBX3-204ENST00000366290 LRRC14Q15048 493 aa10.54□□□□□ -0.72
YBX3-204ENST00000366290 LLGL2Q6P1M3 1020 aa10.54□□□□□ -0.72
YBX3-204ENST00000366290 DTWD1Q8N5C7 304 aa10.54□□□□□ -0.72
YBX3-204ENST00000366290 GRIN3AQ8TCU5 1115 aa10.54□□□□□ -0.72
YBX3-204ENST00000366290 NSD3Q9BZ95 1437 aa10.54□□□□□ -0.72
YBX3-204ENST00000366290 NRSN2Q9GZP1 204 aa10.54□□□□□ -0.72
YBX3-204ENST00000366290 ANKRD26Q9UPS8 1709 aa10.54□□□□□ -0.72
YBX3-204ENST00000366290 SBF2Q86WG5 1849 aa10.54□□□□□ -0.72
YBX3-204ENST00000366290 NUP188Q5SRE5 1749 aa10.53□□□□□ -0.72
YBX3-204ENST00000366290 CYP11A1P05108 521 aa10.53□□□□□ -0.72
YBX3-204ENST00000366290 LMNB1P20700 586 aa10.53□□□□□ -0.72
YBX3-204ENST00000366290 ZNF252P-AS1Q0IIN9 211 aa10.53□□□□□ -0.72
YBX3-204ENST00000366290 PAK2Q13177 524 aa10.53□□□□□ -0.72
YBX3-204ENST00000366290 SUZ12Q15022 739 aaKnown RBP10.53□□□□□ -0.72
YBX3-204ENST00000366290 CD163Q86VB7 1156 aa10.53□□□□□ -0.72
YBX3-204ENST00000366290 KIAA0825Q8IV33 1275 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms