RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 SEL1L2Q5TEA6 688 aa15.01□□□□□ -0.01
LDB3-202ENST00000361373 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.01□□□□□ -0.01
LDB3-202ENST00000361373 TRAPPC10P48553 1259 aa15.01□□□□□ -0.01
LDB3-202ENST00000361373 FANCCQ00597 558 aa15.01□□□□□ -0.01
LDB3-202ENST00000361373 GRAPQ13588 217 aa15.01□□□□□ -0.01
LDB3-202ENST00000361373 GRIPAP1Q4V328 841 aa15.01□□□□□ -0.01
LDB3-202ENST00000361373 ZNF569Q5MCW4 686 aa15.01□□□□□ -0.01
LDB3-202ENST00000361373 TMTC1Q8IUR5 882 aa15.01□□□□□ -0.01
LDB3-202ENST00000361373 GRAPLQ8TC17 118 aaPredicted RBP15.01□□□□□ -0.01
LDB3-202ENST00000361373 A0A1W2PRG0 241 aa15□□□□□ -0.01
LDB3-202ENST00000361373 TCP10L2B9ZVM9 353 aa15□□□□□ -0.01
LDB3-202ENST00000361373 BCRP11274 1271 aa15□□□□□ -0.01
LDB3-202ENST00000361373 CLCN1P35523 988 aa15□□□□□ -0.01
LDB3-202ENST00000361373 USP14P54578 494 aa15□□□□□ -0.01
LDB3-202ENST00000361373 FAM173BQ6P4H8 233 aa15□□□□□ -0.01
LDB3-202ENST00000361373 VPS16Q9H269 839 aa15□□□□□ -0.01
LDB3-202ENST00000361373 ZNF445P59923 1031 aa15□□□□□ -0.01
LDB3-202ENST00000361373 RTKN2Q8IZC4 609 aa15□□□□□ -0.01
LDB3-202ENST00000361373 ZNF830Q96NB3 372 aaPredicted RBP15□□□□□ -0.01
LDB3-202ENST00000361373 SEC62Q99442 399 aaKnown RBP15□□□□□ -0.01
LDB3-202ENST00000361373 MRPL44Q9H9J2 332 aaKnown RBP15□□□□□ -0.01
LDB3-202ENST00000361373 BSDC1Q9NW68 430 aaPredicted RBP15□□□□□ -0.01
LDB3-202ENST00000361373 H7C1W4 665 aa15□□□□□ -0.01
LDB3-202ENST00000361373 YWHAEP62258 255 aaKnown RBP15□□□□□ -0.01
LDB3-202ENST00000361373 ASIC2Q16515 512 aa15□□□□□ -0.01
LDB3-202ENST00000361373 CCDC14Q49A88 953 aa15□□□□□ -0.01
LDB3-202ENST00000361373 ARHGEF16Q5VV41 709 aa15□□□□□ -0.01
LDB3-202ENST00000361373 TRIML1Q8N9V2 468 aa15□□□□□ -0.01
LDB3-202ENST00000361373 KANSL2Q9H9L4 492 aa15□□□□□ -0.01
LDB3-202ENST00000361373 PCDHA12Q9UN75 941 aa15□□□□□ -0.01
LDB3-202ENST00000361373 NFE2L3Q9Y4A8 694 aa15□□□□□ -0.01
LDB3-202ENST00000361373 ADORA1P30542 326 aa15□□□□□ -0.01
LDB3-202ENST00000361373 ADD2P35612 726 aa15□□□□□ -0.01
LDB3-202ENST00000361373 AMNQ9BXJ7 453 aa15□□□□□ -0.01
LDB3-202ENST00000361373 RNF26Q9BY78 433 aaPredicted RBP15□□□□□ -0.01
LDB3-202ENST00000361373 MAGEF1Q9HAY2 307 aa15□□□□□ -0.01
LDB3-202ENST00000361373 CALCOCO2Q13137 446 aa14.99□□□□□ -0.01
LDB3-202ENST00000361373 TNS3Q68CZ2 1445 aa14.99□□□□□ -0.01
LDB3-202ENST00000361373 LAD1O00515 517 aa14.99□□□□□ -0.01
LDB3-202ENST00000361373 OR52Z1P0C646 297 aa14.99□□□□□ -0.01
LDB3-202ENST00000361373 ALAS1P13196 640 aa14.99□□□□□ -0.01
LDB3-202ENST00000361373 GJC1P36383 396 aa14.99□□□□□ -0.01
LDB3-202ENST00000361373 CLUL1Q15846 466 aa14.99□□□□□ -0.01
LDB3-202ENST00000361373 GLG1Q92896 1179 aa14.99□□□□□ -0.01
LDB3-202ENST00000361373 LSG1Q9H089 658 aaKnown RBP14.99□□□□□ -0.01
LDB3-202ENST00000361373 LZTFL1Q9NQ48 299 aa14.99□□□□□ -0.01
LDB3-202ENST00000361373 RGS12O14924 1447 aa14.99□□□□□ -0.01
LDB3-202ENST00000361373 CDC42BPAQ5VT25 1732 aa14.99□□□□□ -0.01
LDB3-202ENST00000361373 TMEM110-MUSTN1A8MSY1 372 aa14.99□□□□□ -0.01
LDB3-202ENST00000361373 MAK16Q9BXY0 300 aaKnown RBP14.99□□□□□ -0.01
LDB3-202ENST00000361373 USP31Q70CQ4 1352 aa14.99□□□□□ -0.01
LDB3-202ENST00000361373 DDX39AO00148 427 aaKnown RBP14.99□□□□□ -0.01
LDB3-202ENST00000361373 GCNT3O95395 438 aa14.99□□□□□ -0.01
LDB3-202ENST00000361373 KIF22Q14807 665 aa14.99□□□□□ -0.01
LDB3-202ENST00000361373 CCDC26Q8TAB7 109 aa14.99□□□□□ -0.01
LDB3-202ENST00000361373 COA1Q9GZY4 146 aa14.99□□□□□ -0.01
LDB3-202ENST00000361373 ADD1P35611 737 aaKnown RBP14.98□□□□□ -0.01
LDB3-202ENST00000361373 CCNA1P78396 465 aa14.98□□□□□ -0.01
LDB3-202ENST00000361373 PTPN12Q05209 780 aaKnown RBP14.98□□□□□ -0.01
LDB3-202ENST00000361373 NSRP1Q9H0G5 558 aaKnown RBP14.98□□□□□ -0.01
LDB3-202ENST00000361373 CYP27B1O15528 508 aa14.98□□□□□ -0.01
LDB3-202ENST00000361373 P4HA1P13674 534 aa14.98□□□□□ -0.01
LDB3-202ENST00000361373 CMA1P23946 247 aa14.98□□□□□ -0.01
LDB3-202ENST00000361373 PPM1FP49593 454 aaPredicted RBP14.98□□□□□ -0.01
LDB3-202ENST00000361373 ARHGEF6Q15052 776 aa14.98□□□□□ -0.01
LDB3-202ENST00000361373 TTC14Q96N46 770 aa14.98□□□□□ -0.01
LDB3-202ENST00000361373 MLXIPQ9HAP2 919 aa14.98□□□□□ -0.01
LDB3-202ENST00000361373 OVOS2A0A0G2JMS6 1433 aa14.98□□□□□ -0.01
LDB3-202ENST00000361373 OVOS2A0A0J9YW53 1432 aa14.98□□□□□ -0.01
LDB3-202ENST00000361373 OVOS2Q6IE36 1432 aa14.98□□□□□ -0.01
LDB3-202ENST00000361373 SERPINB13Q9UIV8 391 aa14.98□□□□□ -0.01
LDB3-202ENST00000361373 RNF17Q9BXT8 1623 aaKnown RBP14.98□□□□□ -0.01
LDB3-202ENST00000361373 POLR3GO15318 223 aaPredicted RBP14.98□□□□□ -0.01
LDB3-202ENST00000361373 TTLL1O95922 423 aa14.98□□□□□ -0.01
LDB3-202ENST00000361373 PDIA3P30101 505 aaKnown RBP14.98□□□□□ -0.01
LDB3-202ENST00000361373 DYMQ7RTS9 669 aa14.98□□□□□ -0.01
LDB3-202ENST00000361373 UNC13BO14795 1591 aa14.97□□□□□ -0.01
LDB3-202ENST00000361373 SPOPO43791 374 aa14.97□□□□□ -0.01
LDB3-202ENST00000361373 FLOT1O75955 427 aa14.97□□□□□ -0.01
LDB3-202ENST00000361373 TPH2Q8IWU9 490 aa14.97□□□□□ -0.01
LDB3-202ENST00000361373 ARFGAP2Q8N6H7 521 aa14.97□□□□□ -0.01
LDB3-202ENST00000361373 FBXO18Q8NFZ0 1043 aa14.97□□□□□ -0.01
LDB3-202ENST00000361373 SEC31BQ9NQW1 1179 aa14.97□□□□□ -0.01
LDB3-202ENST00000361373 TPCN1Q9ULQ1 816 aa14.97□□□□□ -0.01
LDB3-202ENST00000361373 RABGAP1Q9Y3P9 1069 aa14.97□□□□□ -0.01
LDB3-202ENST00000361373 ADGRB3O60242 1522 aa14.97□□□□□ -0.01
LDB3-202ENST00000361373 LONP1P36776 959 aaKnown RBP14.97□□□□□ -0.01
LDB3-202ENST00000361373 POLA2Q14181 598 aa14.97□□□□□ -0.01
LDB3-202ENST00000361373 DEPTORQ8TB45 409 aa14.97□□□□□ -0.01
LDB3-202ENST00000361373 LARSQ9P2J5 1176 aaKnown RBP14.97□□□□□ -0.01
LDB3-202ENST00000361373 NARFQ9UHQ1 456 aa14.97□□□□□ -0.01
LDB3-202ENST00000361373 KARSQ15046 597 aaKnown RBP14.97□□□□□ -0.01
LDB3-202ENST00000361373 ZBTB8OSQ8IWT0 167 aa14.97□□□□□ -0.01
LDB3-202ENST00000361373 LRRC47Q8N1G4 583 aaKnown RBP14.97□□□□□ -0.01
LDB3-202ENST00000361373 NELFBQ8WX92 580 aa14.97□□□□□ -0.01
LDB3-202ENST00000361373 CSRNP1Q96S65 589 aa14.97□□□□□ -0.01
LDB3-202ENST00000361373 TEKT3Q9BXF9 490 aa14.97□□□□□ -0.01
LDB3-202ENST00000361373 PCDHA1Q9Y5I3 950 aa14.97□□□□□ -0.01
LDB3-202ENST00000361373 hCG_1642624A0A1W2PR95 340 aa14.97□□□□□ -0.01
LDB3-202ENST00000361373 TMEM232C9JQI7 657 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms