RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 EPS15P42566 896 aa12.65□□□□□ -0.38
SSU72-202ENST00000359060 TMEM266Q2M3C6 531 aa12.65□□□□□ -0.38
SSU72-202ENST00000359060 DPF2Q92785 391 aa12.65□□□□□ -0.38
SSU72-202ENST00000359060 CPVLQ9H3G5 476 aa12.65□□□□□ -0.38
SSU72-202ENST00000359060 PLEKHG2Q9H7P9 1386 aa12.65□□□□□ -0.38
SSU72-202ENST00000359060 ARHGAP6O43182 974 aa12.65□□□□□ -0.38
SSU72-202ENST00000359060 BTDP43251 543 aa12.65□□□□□ -0.38
SSU72-202ENST00000359060 UBXN1Q04323 297 aa12.65□□□□□ -0.38
SSU72-202ENST00000359060 SPAG1Q07617 926 aa12.65□□□□□ -0.38
SSU72-202ENST00000359060 SF3B3Q15393 1217 aaKnown RBP12.65□□□□□ -0.38
SSU72-202ENST00000359060 TMTC3Q6ZXV5 915 aa12.65□□□□□ -0.38
SSU72-202ENST00000359060 NSUN4Q96CB9 384 aaKnown RBP12.65□□□□□ -0.38
SSU72-202ENST00000359060 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.65□□□□□ -0.38
SSU72-202ENST00000359060 KLRF2D3W0D1 207 aa12.65□□□□□ -0.38
SSU72-202ENST00000359060 CCNT1O60563 726 aaKnown RBP12.65□□□□□ -0.38
SSU72-202ENST00000359060 FBXL16Q8N461 479 aa12.65□□□□□ -0.38
SSU72-202ENST00000359060 UBE2Q2Q8WVN8 375 aa12.65□□□□□ -0.38
SSU72-202ENST00000359060 ERO1AQ96HE7 468 aa12.65□□□□□ -0.38
SSU72-202ENST00000359060 PPP1R13BQ96KQ4 1090 aa12.65□□□□□ -0.38
SSU72-202ENST00000359060 BMP2KQ9NSY1 1161 aaPredicted RBP12.65□□□□□ -0.38
SSU72-202ENST00000359060 WWC2Q6AWC2 1192 aa12.64□□□□□ -0.39
SSU72-202ENST00000359060 RBM17Q96I25 401 aaKnown RBP12.64□□□□□ -0.39
SSU72-202ENST00000359060 UBA5Q9GZZ9 404 aa12.64□□□□□ -0.39
SSU72-202ENST00000359060 SCN11AQ9UI33 1791 aa12.64□□□□□ -0.39
SSU72-202ENST00000359060 PCP11498 1178 aaKnown RBP12.64□□□□□ -0.39
SSU72-202ENST00000359060 GNA11P29992 359 aa12.64□□□□□ -0.39
SSU72-202ENST00000359060 PTPAQ15257 358 aa12.64□□□□□ -0.39
SSU72-202ENST00000359060 CARD6Q9BX69 1037 aa12.64□□□□□ -0.39
SSU72-202ENST00000359060 FAM217BQ9NTX9 383 aaPredicted RBP12.64□□□□□ -0.39
SSU72-202ENST00000359060 CLSTN1O94985 981 aa12.64□□□□□ -0.39
SSU72-202ENST00000359060 SLFN14P0C7P3 912 aa12.64□□□□□ -0.39
SSU72-202ENST00000359060 TRIM21P19474 475 aaKnown RBP12.64□□□□□ -0.39
SSU72-202ENST00000359060 TXKP42681 527 aa12.64□□□□□ -0.39
SSU72-202ENST00000359060 PLCD1P51178 756 aa12.64□□□□□ -0.39
SSU72-202ENST00000359060 SH3RF3Q8TEJ3 882 aaPredicted RBP12.64□□□□□ -0.39
SSU72-202ENST00000359060 RAB34Q9BZG1 259 aa12.64□□□□□ -0.39
SSU72-202ENST00000359060 PAK1Q13153 545 aa12.63□□□□□ -0.39
SSU72-202ENST00000359060 NKX2-3Q8TAU0 364 aa12.63□□□□□ -0.39
SSU72-202ENST00000359060 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.63□□□□□ -0.39
SSU72-202ENST00000359060 FBXO2Q9UK22 296 aaPredicted RBP12.63□□□□□ -0.39
SSU72-202ENST00000359060 C5P01031 1676 aa12.63□□□□□ -0.39
SSU72-202ENST00000359060 HLA-DOAP06340 250 aa12.63□□□□□ -0.39
SSU72-202ENST00000359060 ETF1P62495 437 aaKnown RBP12.63□□□□□ -0.39
SSU72-202ENST00000359060 AMPD3Q01432 767 aa12.63□□□□□ -0.39
SSU72-202ENST00000359060 ERCC6LQ2NKX8 1250 aa12.63□□□□□ -0.39
SSU72-202ENST00000359060 TRIML1Q8N9V2 468 aa12.63□□□□□ -0.39
SSU72-202ENST00000359060 ZMYND15Q9H091 742 aa12.63□□□□□ -0.39
SSU72-202ENST00000359060 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.63□□□□□ -0.39
SSU72-202ENST00000359060 SPATA31A5Q5VU36 1347 aa12.63□□□□□ -0.39
SSU72-202ENST00000359060 SPATA31A7Q8IWB4 1347 aa12.63□□□□□ -0.39
SSU72-202ENST00000359060 ERCC3P19447 782 aa12.63□□□□□ -0.39
SSU72-202ENST00000359060 GPS2Q13227 327 aa12.63□□□□□ -0.39
SSU72-202ENST00000359060 ENOX2Q16206 610 aaKnown RBP12.63□□□□□ -0.39
SSU72-202ENST00000359060 ARMCX5Q6P1M9 558 aa12.63□□□□□ -0.39
SSU72-202ENST00000359060 NELFBQ8WX92 580 aa12.63□□□□□ -0.39
SSU72-202ENST00000359060 XDHP47989 1333 aa12.63□□□□□ -0.39
SSU72-202ENST00000359060 FKBP15Q5T1M5 1219 aa12.62□□□□□ -0.39
SSU72-202ENST00000359060 SRBD1Q8N5C6 995 aaKnown RBP12.62□□□□□ -0.39
SSU72-202ENST00000359060 ZNF397Q8NF99 534 aaPredicted RBP12.62□□□□□ -0.39
SSU72-202ENST00000359060 RNF216Q9NWF9 866 aaPredicted RBP12.62□□□□□ -0.39
SSU72-202ENST00000359060 TNS2Q63HR2 1409 aa12.62□□□□□ -0.39
SSU72-202ENST00000359060 ZNF142P52746 1687 aaPredicted RBP12.62□□□□□ -0.39
SSU72-202ENST00000359060 SMCO2A6NFE2 343 aa12.62□□□□□ -0.39
SSU72-202ENST00000359060 NOM1Q5C9Z4 860 aaKnown RBP12.62□□□□□ -0.39
SSU72-202ENST00000359060 ZNF569Q5MCW4 686 aa12.62□□□□□ -0.39
SSU72-202ENST00000359060 BIN2Q9UBW5 565 aaPredicted RBP12.62□□□□□ -0.39
SSU72-202ENST00000359060 SPATA1Q5VX52 437 aa12.62□□□□□ -0.39
SSU72-202ENST00000359060 TXNRD3Q86VQ6 643 aa12.62□□□□□ -0.39
SSU72-202ENST00000359060 VSTM4Q8IW00 320 aa12.62□□□□□ -0.39
SSU72-202ENST00000359060 PAGE5Q96GU1 130 aa12.62□□□□□ -0.39
SSU72-202ENST00000359060 LEMD3Q9Y2U8 911 aa12.62□□□□□ -0.39
SSU72-202ENST00000359060 FRMPD2Q68DX3 1309 aaPredicted RBP12.62□□□□□ -0.39
SSU72-202ENST00000359060 CCZ1BP86790 482 aa12.62□□□□□ -0.39
SSU72-202ENST00000359060 CCZ1P86791 482 aaPredicted RBP12.62□□□□□ -0.39
SSU72-202ENST00000359060 PDE4DQ08499 809 aa12.62□□□□□ -0.39
SSU72-202ENST00000359060 NONOQ15233 471 aaKnown RBP eCLIP12.62□□□□□ -0.395e-7■■■■□ 19.6
SSU72-202ENST00000359060 USP17L2Q6R6M4 530 aa12.62□□□□□ -0.39
SSU72-202ENST00000359060 GPIHBP1Q8IV16 184 aa12.62□□□□□ -0.39
SSU72-202ENST00000359060 LRRC47Q8N1G4 583 aaKnown RBP12.62□□□□□ -0.39
SSU72-202ENST00000359060 BPIFA3Q9BQP9 254 aa12.62□□□□□ -0.39
SSU72-202ENST00000359060 OSBPL5Q9H0X9 879 aaPredicted RBP12.62□□□□□ -0.39
SSU72-202ENST00000359060 PUF60Q9UHX1 559 aaKnown RBP12.62□□□□□ -0.39
SSU72-202ENST00000359060 PPP2R2CQ9Y2T4 447 aa12.62□□□□□ -0.39
SSU72-202ENST00000359060 MARF1Q9Y4F3 1742 aaKnown RBP12.62□□□□□ -0.39
SSU72-202ENST00000359060 POLR3GO15318 223 aaPredicted RBP12.61□□□□□ -0.39
SSU72-202ENST00000359060 TOB1P50616 345 aaPredicted RBP12.61□□□□□ -0.39
SSU72-202ENST00000359060 SCNN1DP51172 638 aa12.61□□□□□ -0.39
SSU72-202ENST00000359060 ENOX1Q8TC92 643 aaKnown RBP12.61□□□□□ -0.39
SSU72-202ENST00000359060 KRT9P35527 623 aa12.61□□□□□ -0.39
SSU72-202ENST00000359060 ZNF76P36508 570 aa12.61□□□□□ -0.39
SSU72-202ENST00000359060 GRAPQ13588 217 aa12.61□□□□□ -0.39
SSU72-202ENST00000359060 CNGA4Q8IV77 575 aa12.61□□□□□ -0.39
SSU72-202ENST00000359060 GRAPLQ8TC17 118 aaPredicted RBP12.61□□□□□ -0.39
SSU72-202ENST00000359060 NOC3LQ8WTT2 800 aaKnown RBP12.61□□□□□ -0.39
SSU72-202ENST00000359060 MAP3K14Q99558 947 aa12.61□□□□□ -0.39
SSU72-202ENST00000359060 RIOK1Q9BRS2 568 aaKnown RBP12.61□□□□□ -0.39
SSU72-202ENST00000359060 MTA3Q9BTC8 594 aa12.61□□□□□ -0.39
SSU72-202ENST00000359060 ZHX1Q9UKY1 873 aaPredicted RBP12.61□□□□□ -0.39
SSU72-202ENST00000359060 PSDA5PKW4 1024 aaPredicted RBP12.61□□□□□ -0.39
SSU72-202ENST00000359060 SERPINB2P05120 415 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms