RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 SPATA1Q5VX52 437 aa9.77□□□□□ -0.85
RFX3-202ENST00000358730 TNFRSF25Q93038 417 aa9.77□□□□□ -0.85
RFX3-202ENST00000358730 WDR24Q96S15 920 aa9.77□□□□□ -0.85
RFX3-202ENST00000358730 THRAP3Q9Y2W1 955 aaKnown RBP9.77□□□□□ -0.85
RFX3-202ENST00000358730 AKR1B15C9JRZ8 316 aaPredicted RBP9.76□□□□□ -0.85
RFX3-202ENST00000358730 TEX33O43247 280 aa9.76□□□□□ -0.85
RFX3-202ENST00000358730 TADA3O75528 432 aa9.76□□□□□ -0.85
RFX3-202ENST00000358730 FGRP09769 529 aa9.76□□□□□ -0.85
RFX3-202ENST00000358730 PTGDRQ13258 359 aa9.76□□□□□ -0.85
RFX3-202ENST00000358730 FAM47AQ5JRC9 791 aa9.76□□□□□ -0.85
RFX3-202ENST00000358730 CLEC4GQ6UXB4 293 aa9.76□□□□□ -0.85
RFX3-202ENST00000358730 SH3RF1Q7Z6J0 888 aa9.76□□□□□ -0.85
RFX3-202ENST00000358730 SRBD1Q8N5C6 995 aaKnown RBP9.76□□□□□ -0.85
RFX3-202ENST00000358730 NSUN4Q96CB9 384 aaKnown RBP9.76□□□□□ -0.85
RFX3-202ENST00000358730 GSDMAQ96QA5 445 aa9.76□□□□□ -0.85
RFX3-202ENST00000358730 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.76□□□□□ -0.85
RFX3-202ENST00000358730 AHDC1Q5TGY3 1603 aaPredicted RBP9.76□□□□□ -0.85
RFX3-202ENST00000358730 NLRP5P59047 1200 aa9.76□□□□□ -0.85
RFX3-202ENST00000358730 ATP2C1P98194 919 aaPredicted RBP9.76□□□□□ -0.85
RFX3-202ENST00000358730 CT47A1Q5JQC4 288 aaPredicted RBP9.76□□□□□ -0.85
RFX3-202ENST00000358730 PIK3AP1Q6ZUJ8 805 aa9.76□□□□□ -0.85
RFX3-202ENST00000358730 APTXQ7Z2E3 356 aaKnown RBP9.76□□□□□ -0.85
RFX3-202ENST00000358730 IGSF22Q8N9C0 903 aa9.76□□□□□ -0.85
RFX3-202ENST00000358730 STAMQ92783 540 aa9.76□□□□□ -0.85
RFX3-202ENST00000358730 CRNKL1Q9BZJ0 848 aaKnown RBP9.76□□□□□ -0.85
RFX3-202ENST00000358730 ARGLU1Q9NWB6 273 aaPredicted RBP9.76□□□□□ -0.85
RFX3-202ENST00000358730 CTNND2Q9UQB3 1225 aa9.76□□□□□ -0.85
RFX3-202ENST00000358730 SOWAHDA6NJG2 315 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 KCNQ2O43526 872 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 ORC4O43929 436 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 SCG2P13521 617 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 MTF1Q14872 753 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 KARSQ15046 597 aaKnown RBP9.75□□□□□ -0.85
RFX3-202ENST00000358730 PPFIBP1Q86W92 1011 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 SMARCC1Q92922 1105 aaPredicted RBP9.75□□□□□ -0.85
RFX3-202ENST00000358730 DCP1AQ9NPI6 582 aaPredicted RBP9.75□□□□□ -0.85
RFX3-202ENST00000358730 KIAA1551Q9HCM1 1747 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 XDHP47989 1333 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 MAST2Q6P0Q8 1798 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 EFCAB8A8MWE9 144 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 SEMA3EO15041 775 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 CCDC175P0C221 793 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 CYP2D6P10635 497 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 PRDX5P30044 214 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 MCM7P33993 719 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 SLC4A8Q2Y0W8 1093 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 CDKAL1Q5VV42 579 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 ZNF771Q7L3S4 317 aaPredicted RBP9.75□□□□□ -0.85
RFX3-202ENST00000358730 LINC00116Q8NCU8 138 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 PANX2Q96RD6 677 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 BLZF1Q9H2G9 400 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 FAM53CQ9NYF3 392 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 TFCP2L1Q9NZI6 479 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 ADD3Q9UEY8 706 aaKnown RBP9.75□□□□□ -0.85
RFX3-202ENST00000358730 CCDC88AQ3V6T2 1871 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 TSPY2A6NKD2 308 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 PPP1R3GB7ZBB8 358 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 BMS1Q14692 1282 aaKnown RBP9.75□□□□□ -0.85
RFX3-202ENST00000358730 FILIP1LQ4L180 1135 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 FBXO33Q7Z6M2 555 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 CPLX3Q8WVH0 158 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 CTAGE1Q96RT6 745 aa9.75□□□□□ -0.85
RFX3-202ENST00000358730 MRPL44Q9H9J2 332 aaKnown RBP9.75□□□□□ -0.85
RFX3-202ENST00000358730 ARPP21Q9UBL0 812 aaPredicted RBP9.75□□□□□ -0.85
RFX3-202ENST00000358730 MYH8P13535 1937 aa9.74□□□□□ -0.85
RFX3-202ENST00000358730 KIF20AO95235 890 aa9.74□□□□□ -0.85
RFX3-202ENST00000358730 KCNQ4P56696 695 aa9.74□□□□□ -0.85
RFX3-202ENST00000358730 PPP2R3AQ06190 1150 aa9.74□□□□□ -0.85
RFX3-202ENST00000358730 RBL2Q08999 1139 aa9.74□□□□□ -0.85
RFX3-202ENST00000358730 TBC1D9BQ66K14 1250 aa9.74□□□□□ -0.85
RFX3-202ENST00000358730 IQUBQ8NA54 791 aa9.74□□□□□ -0.85
RFX3-202ENST00000358730 JAG2Q9Y219 1238 aa9.74□□□□□ -0.85
RFX3-202ENST00000358730 MRFAP1Q9Y605 127 aa9.74□□□□□ -0.85
RFX3-202ENST00000358730 MFAP3LO75121 409 aa9.74□□□□□ -0.85
RFX3-202ENST00000358730 COBLO75128 1261 aa9.74□□□□□ -0.85
RFX3-202ENST00000358730 HIBADHP31937 336 aaKnown RBP9.74□□□□□ -0.85
RFX3-202ENST00000358730 CCT6AP40227 531 aaKnown RBP9.74□□□□□ -0.85
RFX3-202ENST00000358730 TRAPPC10P48553 1259 aa9.74□□□□□ -0.85
RFX3-202ENST00000358730 E2F4Q16254 413 aa9.74□□□□□ -0.85
RFX3-202ENST00000358730 PFKFB3Q16875 520 aaPredicted RBP9.74□□□□□ -0.85
RFX3-202ENST00000358730 TMCO3Q6UWJ1 677 aa9.74□□□□□ -0.85
RFX3-202ENST00000358730 SMIM5Q71RC9 77 aa9.74□□□□□ -0.85
RFX3-202ENST00000358730 CCDC12Q8WUD4 166 aaPredicted RBP9.74□□□□□ -0.85
RFX3-202ENST00000358730 KIFC2Q96AC6 838 aa9.74□□□□□ -0.85
RFX3-202ENST00000358730 ST7Q9NRC1 585 aa9.74□□□□□ -0.85
RFX3-202ENST00000358730 ATP8A2Q9NTI2 1148 aa9.74□□□□□ -0.85
RFX3-202ENST00000358730 VEGFAP15692 232 aaPredicted RBP9.73□□□□□ -0.85
RFX3-202ENST00000358730 KIF5BP33176 963 aa9.73□□□□□ -0.85
RFX3-202ENST00000358730 PBX1P40424 430 aa9.73□□□□□ -0.85
RFX3-202ENST00000358730 MAP3K9P80192 1104 aa9.73□□□□□ -0.85
RFX3-202ENST00000358730 TEX35Q5T0J7 233 aa9.73□□□□□ -0.85
RFX3-202ENST00000358730 RRAGBQ5VZM2 374 aa9.73□□□□□ -0.85
RFX3-202ENST00000358730 NAA15Q9BXJ9 866 aaKnown RBP9.73□□□□□ -0.85
RFX3-202ENST00000358730 LZTFL1Q9NQ48 299 aa9.73□□□□□ -0.85
RFX3-202ENST00000358730 FHOD1Q9Y613 1164 aa9.73□□□□□ -0.85
RFX3-202ENST00000358730 TPM1P09493 284 aa9.73□□□□□ -0.85
RFX3-202ENST00000358730 PNMA6AP0CW24 399 aaPredicted RBP9.73□□□□□ -0.85
RFX3-202ENST00000358730 RPS8P62241 208 aaKnown RBP9.73□□□□□ -0.85
RFX3-202ENST00000358730 PDXDC2PQ6P474 469 aa9.73□□□□□ -0.85
RFX3-202ENST00000358730 RAD9BQ6WBX8 426 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms