RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 SV2BQ7L1I2 683 aa10.77□□□□□ -0.69
CHD3-202ENST00000358181 ANKRD42Q8N9B4 389 aa10.77□□□□□ -0.69
CHD3-202ENST00000358181 PIDD1Q9HB75 910 aa10.77□□□□□ -0.69
CHD3-202ENST00000358181 NDUFB9Q9Y6M9 179 aa10.77□□□□□ -0.69
CHD3-202ENST00000358181 LRPPRCP42704 1394 aaKnown RBP10.77□□□□□ -0.69
CHD3-202ENST00000358181 Q6ZUG5 572 aa10.77□□□□□ -0.69
CHD3-202ENST00000358181 PGBD3Q8N328 593 aa10.77□□□□□ -0.69
CHD3-202ENST00000358181 TEKT4Q8WW24 435 aa10.77□□□□□ -0.69
CHD3-202ENST00000358181 LZICQ8WZA0 190 aa10.77□□□□□ -0.69
CHD3-202ENST00000358181 KRT12Q99456 494 aa10.77□□□□□ -0.69
CHD3-202ENST00000358181 M0R2C6 588 aa10.77□□□□□ -0.69
CHD3-202ENST00000358181 SOX5P35711 763 aa10.77□□□□□ -0.69
CHD3-202ENST00000358181 TEX13AQ9BXU3 409 aaPredicted RBP10.77□□□□□ -0.69
CHD3-202ENST00000358181 SH2B1Q9NRF2 756 aaPredicted RBP10.77□□□□□ -0.69
CHD3-202ENST00000358181 SAMSN1Q9NSI8 373 aaKnown RBP10.77□□□□□ -0.69
CHD3-202ENST00000358181 CNPY2Q9Y2B0 182 aa10.77□□□□□ -0.69
CHD3-202ENST00000358181 DMRT2Q9Y5R5 561 aa10.77□□□□□ -0.69
CHD3-202ENST00000358181 GTPBP10A4D1E9 387 aaKnown RBP10.76□□□□□ -0.69
CHD3-202ENST00000358181 TCP10L2B9ZVM9 353 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 CNGA4Q8IV77 575 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 SLC8A2Q9UPR5 921 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 VWA3AA6NCI4 1184 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 DPYSL4O14531 572 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 SDSP20132 328 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 CADPS2Q86UW7 1296 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 C10orf67Q8IYJ2 551 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 UBN2Q6ZU65 1347 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 TBC1D10BQ4KMP7 808 aaPredicted RBP10.76□□□□□ -0.69
CHD3-202ENST00000358181 KLHDC4Q8TBB5 520 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 RHPN1Q8TCX5 695 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 EXT2Q93063 718 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 TTC21BQ7Z4L5 1316 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 SESN3P58005 492 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 RINLQ6ZS11 566 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 CCDC26Q8TAB7 109 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 AKT3Q9Y243 479 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 GNAQP50148 359 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 TFCP2Q12800 502 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 UBL4BQ8N7F7 174 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 TTC1Q99614 292 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 IPO11Q9UI26 975 aaKnown RBP10.76□□□□□ -0.69
CHD3-202ENST00000358181 PTPRCP08575 1304 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 RPL13P26373 211 aaKnown RBP10.76□□□□□ -0.69
CHD3-202ENST00000358181 TXKP42681 527 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 PSMB7Q99436 277 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 C14orf93Q9H972 538 aaKnown RBP10.76□□□□□ -0.69
CHD3-202ENST00000358181 CTTNBP2NLQ9P2B4 639 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 PIK3R4Q99570 1358 aa10.76□□□□□ -0.69
CHD3-202ENST00000358181 NEMP1O14524 444 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 HCLS1P14317 486 aaPredicted RBP10.75□□□□□ -0.69
CHD3-202ENST00000358181 NSUN2Q08J23 767 aaKnown RBP eCLIP10.75□□□□□ -0.69
CHD3-202ENST00000358181 DEPTORQ8TB45 409 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 CAPN2P17655 700 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 PRPSAP1Q14558 356 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 ARHGEF6Q15052 776 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 RSRC2Q7L4I2 434 aaKnown RBP10.75□□□□□ -0.69
CHD3-202ENST00000358181 KRT27Q7Z3Y8 459 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 HOOK2Q96ED9 719 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 NOC4LQ9BVI4 516 aaKnown RBP10.75□□□□□ -0.69
CHD3-202ENST00000358181 VCX3AQ9NNX9 186 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 GOLGA8CPA6NN73 597 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 CPA1P15085 419 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 KRT83P78385 493 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 TRIM68Q6AZZ1 485 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 ZNF277Q9NRM2 450 aaPredicted RBP10.75□□□□□ -0.69
CHD3-202ENST00000358181 SLC4A7Q9Y6M7 1214 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 KRT86O43790 486 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 ELF1P32519 619 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 TNNC1P63316 161 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 NMIQ13287 307 aaPredicted RBP10.75□□□□□ -0.69
CHD3-202ENST00000358181 DPP8Q6V1X1 898 aaPredicted RBP10.75□□□□□ -0.69
CHD3-202ENST00000358181 NELFCDQ8IXH7 590 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 ZMAT2Q96NC0 199 aaKnown RBP10.75□□□□□ -0.69
CHD3-202ENST00000358181 MRPL44Q9H9J2 332 aaKnown RBP10.75□□□□□ -0.69
CHD3-202ENST00000358181 ZC4H2Q9NQZ6 224 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 CENPAP49450 140 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 ARHGDIAP52565 204 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 PTK2BQ14289 1009 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 FAM98CQ17RN3 349 aaKnown RBP10.75□□□□□ -0.69
CHD3-202ENST00000358181 MIER3Q7Z3K6 550 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 KLHL7Q8IXQ5 586 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 FAM186BQ8IYM0 893 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 ZNF594Q96JF6 807 aaPredicted RBP10.75□□□□□ -0.69
CHD3-202ENST00000358181 TACO1Q9BSH4 297 aaKnown RBP10.75□□□□□ -0.69
CHD3-202ENST00000358181 CPSF2Q9P2I0 782 aaKnown RBP10.75□□□□□ -0.69
CHD3-202ENST00000358181 SYT1P21579 422 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 KCNA1Q09470 495 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 OTUD7BQ6GQQ9 843 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 DYMQ7RTS9 669 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 TPH2Q8IWU9 490 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 CNBD1Q8NA66 436 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 CEP19Q96LK0 163 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 CNNM2Q9H8M5 875 aa10.75□□□□□ -0.69
CHD3-202ENST00000358181 CPSF3Q9UKF6 684 aaKnown RBP10.75□□□□□ -0.69
CHD3-202ENST00000358181 UBXN8O00124 270 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 EPHB1P54762 984 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 CCDC38Q502W7 563 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 SIX5Q8N196 739 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 DIAPH2O60879 1101 aa10.74□□□□□ -0.69
CHD3-202ENST00000358181 CCDC85BQ15834 202 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms