RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 AATFQ9NY61 560 aaKnown RBP eCLIP4.56□□□□□ -1.68
SYNE2-204ENST00000358025 TPCN1Q9ULQ1 816 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 KLF18A0A0U1RQI7 1052 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 ATP2B3Q16720 1220 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 SEPT14Q6ZU15 432 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 FANCLQ9NW38 375 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 NKIRAS1Q9NYS0 192 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.56□□□□□ -1.68
SYNE2-204ENST00000358025 INTUQ9ULD6 942 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 CAVIN4Q5BKX8 364 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 ZNF658Q5TYW1 1059 aaPredicted RBP4.56□□□□□ -1.68
SYNE2-204ENST00000358025 C8orf74Q6P047 294 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 ERMNQ8TAM6 284 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 EIF3DO15371 548 aaKnown RBP eCLIP4.56□□□□□ -1.68
SYNE2-204ENST00000358025 GGPS1O95749 300 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 FAM114A2Q9NRY5 505 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 RNF40O75150 1001 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 FAM107AO95990 144 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 STK3Q13188 491 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 SV2BQ7L1I2 683 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 SEC62Q99442 399 aaKnown RBP4.56□□□□□ -1.68
SYNE2-204ENST00000358025 EPN3Q9H201 632 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 FHOD1Q9Y613 1164 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 GAS8O95995 478 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 CNGA1P29973 690 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 FKBP4Q02790 459 aaKnown RBP eCLIP4.56□□□□□ -1.68
SYNE2-204ENST00000358025 CDC37Q16543 378 aaPredicted RBP4.56□□□□□ -1.68
SYNE2-204ENST00000358025 RIC8AQ9NPQ8 531 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 PCDHA7Q9UN72 937 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 A2ML1A8K2U0 1454 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 KIF1BO60333 1816 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 NDUFA8P51970 172 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 CFAP157Q5JU67 520 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 ZMYM1Q5SVZ6 1142 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 RNF168Q8IYW5 571 aaPredicted RBP4.56□□□□□ -1.68
SYNE2-204ENST00000358025 IL1RAPL1Q9NZN1 696 aa4.56□□□□□ -1.68
SYNE2-204ENST00000358025 A0A1B0GVL5 298 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 GBP5Q96PP8 586 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 RNF26Q9BY78 433 aaPredicted RBP4.55□□□□□ -1.68
SYNE2-204ENST00000358025 A0A1W2PP64 1363 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 CD2BP2O95400 341 aaKnown RBP4.55□□□□□ -1.68
SYNE2-204ENST00000358025 FAM237AA0A1B0GTK4 181 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 KRT2P35908 639 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 DDR1Q08345 913 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 AGBL2Q5U5Z8 902 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 AGXT2Q9BYV1 514 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 HACD3Q9P035 362 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 YTHDC2Q9H6S0 1430 aaKnown RBP4.55□□□□□ -1.68
SYNE2-204ENST00000358025 NDUFA10O95299 355 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 GSTO1P78417 241 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 FIGNQ5HY92 759 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 FAM204AQ9H8W3 233 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 STXBP3O00186 592 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 RESP18Q5W5W9 173 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 FMR1NBQ8N0W7 255 aaPredicted RBP4.55□□□□□ -1.68
SYNE2-204ENST00000358025 TBX22Q9Y458 520 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 DENND4BO75064 1496 aaPredicted RBP4.55□□□□□ -1.68
SYNE2-204ENST00000358025 A0A1W2PRG0 241 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 UBE3CQ15386 1083 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 UGGT1Q9NYU2 1555 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 MCM10Q7L590 875 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 SKAP1Q86WV1 359 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 SECISBP2LQ93073 1101 aaKnown RBP4.55□□□□□ -1.68
SYNE2-204ENST00000358025 TSPOAP1O95153 1857 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 BEND3Q5T5X7 828 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 IFIT1BQ5T764 474 aaKnown RBP4.55□□□□□ -1.68
SYNE2-204ENST00000358025 KIFAP3Q92845 792 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 LMNB1P20700 586 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 ZNF512BQ96KM6 892 aaPredicted RBP4.55□□□□□ -1.68
SYNE2-204ENST00000358025 ADCY10Q96PN6 1610 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 CIB2O75838 187 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 CENPTQ96BT3 561 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 PHACTR3Q96KR7 559 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 CFAP57Q96MR6 1250 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 CNNM1Q9NRU3 951 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 A0A1B0GTH6 734 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 FKBP3Q00688 224 aaKnown RBP4.55□□□□□ -1.68
SYNE2-204ENST00000358025 CALCOCO2Q13137 446 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 SMYD5Q6GMV2 418 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 TBC1D7Q9P0N9 293 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 STOML1Q9UBI4 398 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 TUBE1Q9UJT0 475 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 GOLGA8QA0A0J9YX86 632 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 GOLGA8OA6NCC3 632 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 GOLGA8NF8WBI6 632 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 IPO5O00410 1097 aaKnown RBP4.55□□□□□ -1.68
SYNE2-204ENST00000358025 MAPK13O15264 365 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 ATP5BP06576 529 aaKnown RBP4.55□□□□□ -1.68
SYNE2-204ENST00000358025 CCT5P48643 541 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 MRPS35P82673 323 aaKnown RBP4.55□□□□□ -1.68
SYNE2-204ENST00000358025 ENOX2Q16206 610 aaKnown RBP4.55□□□□□ -1.68
SYNE2-204ENST00000358025 SKIDA1Q1XH10 827 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 TXNDC2Q86VQ3 553 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 APBB2Q92870 758 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 CEP104O60308 925 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 GCFC2P16383 781 aaKnown RBP4.55□□□□□ -1.68
SYNE2-204ENST00000358025 MORC3Q14149 939 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 SYDE1Q6ZW31 735 aaPredicted RBP4.55□□□□□ -1.68
SYNE2-204ENST00000358025 FSBPO95073 299 aa4.55□□□□□ -1.68
SYNE2-204ENST00000358025 TROVE2P10155 538 aaKnown RBP eCLIP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms