RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 LAMB1P07942 1786 aa14.55□□□□□ -0.08
RTFDC1-202ENST00000357348 PTPDC1A2A3K4 754 aa14.55□□□□□ -0.08
RTFDC1-202ENST00000357348 FBXL16Q8N461 479 aa14.55□□□□□ -0.08
RTFDC1-202ENST00000357348 SLC44A5Q8NCS7 719 aa14.55□□□□□ -0.08
RTFDC1-202ENST00000357348 NAT10Q9H0A0 1025 aaKnown RBP14.55□□□□□ -0.08
RTFDC1-202ENST00000357348 RNF181Q9P0P0 153 aa14.55□□□□□ -0.08
RTFDC1-202ENST00000357348 ARPP21Q9UBL0 812 aaPredicted RBP14.55□□□□□ -0.08
RTFDC1-202ENST00000357348 HDAC9Q9UKV0 1011 aa14.55□□□□□ -0.08
RTFDC1-202ENST00000357348 FOCADQ5VW36 1801 aa14.55□□□□□ -0.08
RTFDC1-202ENST00000357348 FZD9O00144 591 aa14.54□□□□□ -0.08
RTFDC1-202ENST00000357348 PRC1O43663 620 aa14.54□□□□□ -0.08
RTFDC1-202ENST00000357348 EGFRP00533 1210 aa14.54□□□□□ -0.08
RTFDC1-202ENST00000357348 ANTXR2P58335 489 aa14.54□□□□□ -0.08
RTFDC1-202ENST00000357348 TNIP1Q15025 636 aa14.54□□□□□ -0.08
RTFDC1-202ENST00000357348 E4F1Q66K89 784 aaPredicted RBP14.54□□□□□ -0.08
RTFDC1-202ENST00000357348 FILIP1Q7Z7B0 1213 aa14.54□□□□□ -0.08
RTFDC1-202ENST00000357348 RAB11FIP4Q86YS3 637 aa14.54□□□□□ -0.08
RTFDC1-202ENST00000357348 MB21D2Q8IYB1 491 aaPredicted RBP14.54□□□□□ -0.08
RTFDC1-202ENST00000357348 CCDC150Q8NCX0 1101 aa14.54□□□□□ -0.08
RTFDC1-202ENST00000357348 FTOQ9C0B1 505 aaKnown RBP eCLIP14.54□□□□□ -0.08
RTFDC1-202ENST00000357348 RTEL1Q9NZ71 1219 aa14.54□□□□□ -0.08
RTFDC1-202ENST00000357348 ZSWIM5Q9P217 1185 aa14.54□□□□□ -0.08
RTFDC1-202ENST00000357348 RANBP6O60518 1105 aaKnown RBP14.54□□□□□ -0.08
RTFDC1-202ENST00000357348 GMPSP49915 693 aaPredicted RBP14.54□□□□□ -0.08
RTFDC1-202ENST00000357348 APOBRQ0VD83 1088 aa14.54□□□□□ -0.08
RTFDC1-202ENST00000357348 DLGAP5Q15398 846 aa14.54□□□□□ -0.08
RTFDC1-202ENST00000357348 ELF2Q15723 593 aa14.54□□□□□ -0.08
RTFDC1-202ENST00000357348 ADALQ6DHV7 355 aa14.54□□□□□ -0.08
RTFDC1-202ENST00000357348 AOPEPQ8N6M6 819 aa14.54□□□□□ -0.08
RTFDC1-202ENST00000357348 FSIP1Q8NA03 581 aa14.54□□□□□ -0.08
RTFDC1-202ENST00000357348 CHMP4CQ96CF2 233 aa14.54□□□□□ -0.08
RTFDC1-202ENST00000357348 DICER1Q9UPY3 1922 aaKnown RBP14.54□□□□□ -0.08
RTFDC1-202ENST00000357348 NBPF9Q3BBW0 867 aa14.53□□□□□ -0.08
RTFDC1-202ENST00000357348 C12orf60Q5U649 245 aa14.53□□□□□ -0.08
RTFDC1-202ENST00000357348 SAMD7Q7Z3H4 446 aa14.53□□□□□ -0.08
RTFDC1-202ENST00000357348 AGBL3Q8NEM8 1001 aa14.53□□□□□ -0.08
RTFDC1-202ENST00000357348 STAG1Q8WVM7 1258 aa14.53□□□□□ -0.08
RTFDC1-202ENST00000357348 MRPS27Q92552 414 aaKnown RBP14.53□□□□□ -0.08
RTFDC1-202ENST00000357348 ZNF274Q96GC6 653 aaPredicted RBP14.53□□□□□ -0.08
RTFDC1-202ENST00000357348 ZNF446Q9NWS9 450 aa14.53□□□□□ -0.08
RTFDC1-202ENST00000357348 TCP10L2B9ZVM9 353 aa14.53□□□□□ -0.08
RTFDC1-202ENST00000357348 EVCP57679 992 aa14.53□□□□□ -0.08
RTFDC1-202ENST00000357348 HDLBPQ00341 1268 aaKnown RBP14.53□□□□□ -0.08
RTFDC1-202ENST00000357348 FAM47AQ5JRC9 791 aa14.53□□□□□ -0.08
RTFDC1-202ENST00000357348 ZSCAN29Q8IWY8 852 aaPredicted RBP14.53□□□□□ -0.08
RTFDC1-202ENST00000357348 MICALL2Q8IY33 904 aa14.53□□□□□ -0.08
RTFDC1-202ENST00000357348 AMOTL1Q8IY63 956 aa14.53□□□□□ -0.08
RTFDC1-202ENST00000357348 VEZTQ9HBM0 779 aa14.53□□□□□ -0.08
RTFDC1-202ENST00000357348 TRMT1Q9NXH9 659 aaKnown RBP14.53□□□□□ -0.08
RTFDC1-202ENST00000357348 MYH15Q9Y2K3 1946 aa14.53□□□□□ -0.08
RTFDC1-202ENST00000357348 SPDYE2BA6NHP3 402 aa14.52□□□□□ -0.08
RTFDC1-202ENST00000357348 SPDYE6P0CI01 402 aa14.52□□□□□ -0.08
RTFDC1-202ENST00000357348 CEBPZQ03701 1054 aaKnown RBP14.52□□□□□ -0.08
RTFDC1-202ENST00000357348 TBC1D10BQ4KMP7 808 aaPredicted RBP14.52□□□□□ -0.08
RTFDC1-202ENST00000357348 CERS3Q8IU89 383 aa14.52□□□□□ -0.08
RTFDC1-202ENST00000357348 PPP1R13BQ96KQ4 1090 aa14.52□□□□□ -0.08
RTFDC1-202ENST00000357348 SENP2Q9HC62 589 aa14.52□□□□□ -0.08
RTFDC1-202ENST00000357348 ANAPC4Q9UJX5 808 aa14.52□□□□□ -0.08
RTFDC1-202ENST00000357348 PCDHA7Q9UN72 937 aa14.52□□□□□ -0.08
RTFDC1-202ENST00000357348 FAM196BA6NMK8 535 aa14.51□□□□□ -0.09
RTFDC1-202ENST00000357348 PPFIA3O75145 1194 aa14.51□□□□□ -0.09
RTFDC1-202ENST00000357348 SBK1Q52WX2 424 aa14.51□□□□□ -0.09
RTFDC1-202ENST00000357348 C9orf131Q5VYM1 1079 aa14.51□□□□□ -0.09
RTFDC1-202ENST00000357348 ARMCX5Q6P1M9 558 aa14.51□□□□□ -0.09
RTFDC1-202ENST00000357348 TIAM2Q8IVF5 1701 aa14.51□□□□□ -0.09
RTFDC1-202ENST00000357348 MRIQ9BWK5 157 aa14.51□□□□□ -0.09
RTFDC1-202ENST00000357348 KRT23Q9C075 422 aa14.51□□□□□ -0.09
RTFDC1-202ENST00000357348 RNF41Q9H4P4 317 aaPredicted RBP14.51□□□□□ -0.09
RTFDC1-202ENST00000357348 MYOZ2Q9NPC6 264 aa14.51□□□□□ -0.09
RTFDC1-202ENST00000357348 KIAA1468Q9P260 1216 aa14.51□□□□□ -0.09
RTFDC1-202ENST00000357348 FAM198AQ9UFP1 575 aa14.51□□□□□ -0.09
RTFDC1-202ENST00000357348 CNOT7Q9UIV1 285 aaKnown RBP14.51□□□□□ -0.09
RTFDC1-202ENST00000357348 NMT2O60551 498 aa14.51□□□□□ -0.09
RTFDC1-202ENST00000357348 DDNO94850 711 aaPredicted RBP14.51□□□□□ -0.09
RTFDC1-202ENST00000357348 CCT2P78371 535 aaKnown RBP14.51□□□□□ -0.09
RTFDC1-202ENST00000357348 BMS1Q14692 1282 aaKnown RBP14.51□□□□□ -0.09
RTFDC1-202ENST00000357348 CNNM2Q9H8M5 875 aa14.51□□□□□ -0.09
RTFDC1-202ENST00000357348 MKNK2Q9HBH9 465 aa14.51□□□□□ -0.09
RTFDC1-202ENST00000357348 DDTLA6NHG4 134 aaPredicted RBP14.5□□□□□ -0.09
RTFDC1-202ENST00000357348 WNT10BO00744 389 aa14.5□□□□□ -0.09
RTFDC1-202ENST00000357348 SLC3A2P08195 630 aaKnown RBP14.5□□□□□ -0.09
RTFDC1-202ENST00000357348 LINC00301Q8NCQ3 95 aa14.5□□□□□ -0.09
RTFDC1-202ENST00000357348 RGS22Q8NE09 1264 aa14.5□□□□□ -0.09
RTFDC1-202ENST00000357348 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.5□□□□□ -0.09
RTFDC1-202ENST00000357348 V9GYY5 206 aaPredicted RBP14.5□□□□□ -0.09
RTFDC1-202ENST00000357348 ASTN2O75129 1339 aaPredicted RBP14.5□□□□□ -0.09
RTFDC1-202ENST00000357348 DDX60LQ5H9U9 1706 aaKnown RBP14.5□□□□□ -0.09
RTFDC1-202ENST00000357348 A0A087WWV3 80 aa14.5□□□□□ -0.09
RTFDC1-202ENST00000357348 CCDC66A2RUB6 948 aa14.5□□□□□ -0.09
RTFDC1-202ENST00000357348 IFIT3O14879 490 aaKnown RBP14.5□□□□□ -0.09
RTFDC1-202ENST00000357348 YEATS4O95619 227 aa14.5□□□□□ -0.09
RTFDC1-202ENST00000357348 FDPSP14324 419 aaKnown RBP14.5□□□□□ -0.09
RTFDC1-202ENST00000357348 RXRAP19793 462 aa14.5□□□□□ -0.09
RTFDC1-202ENST00000357348 PDIA3P30101 505 aaKnown RBP14.5□□□□□ -0.09
RTFDC1-202ENST00000357348 ME1P48163 572 aa14.5□□□□□ -0.09
RTFDC1-202ENST00000357348 PDE4BQ07343 736 aa14.5□□□□□ -0.09
RTFDC1-202ENST00000357348 NCAPHQ15003 741 aa14.5□□□□□ -0.09
RTFDC1-202ENST00000357348 ESR2Q92731 530 aa14.5□□□□□ -0.09
RTFDC1-202ENST00000357348 NCOA5Q9HCD5 579 aaKnown RBP14.5□□□□□ -0.09
RTFDC1-202ENST00000357348 TSPY2A6NKD2 308 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms