RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 AENQ8WTP8 325 aaKnown RBP13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 SMARCC1Q92922 1105 aaPredicted RBP13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 EPN1Q9Y6I3 576 aaPredicted RBP13.66□□□□□ -0.22
SMARCAL1-201ENST00000357276 DISP2A7MBM2 1401 aa13.65□□□□□ -0.22
SMARCAL1-201ENST00000357276 MEGF6O75095 1541 aa13.65□□□□□ -0.22
SMARCAL1-201ENST00000357276 ATP1A1P05023 1023 aaKnown RBP13.65□□□□□ -0.22
SMARCAL1-201ENST00000357276 ZNF512BQ96KM6 892 aaPredicted RBP13.65□□□□□ -0.22
SMARCAL1-201ENST00000357276 SELENOOQ9BVL4 669 aa13.65□□□□□ -0.22
SMARCAL1-201ENST00000357276 TRIM10Q9UDY6 481 aa13.65□□□□□ -0.22
SMARCAL1-201ENST00000357276 SAR1BQ9Y6B6 198 aa13.65□□□□□ -0.22
SMARCAL1-201ENST00000357276 ERLIN2O94905 339 aa13.65□□□□□ -0.22
SMARCAL1-201ENST00000357276 CDC25AP30304 524 aa13.65□□□□□ -0.22
SMARCAL1-201ENST00000357276 AKAP17AQ02040 695 aaKnown RBP13.65□□□□□ -0.22
SMARCAL1-201ENST00000357276 PPFIA1Q13136 1202 aa13.65□□□□□ -0.22
SMARCAL1-201ENST00000357276 SAFBQ15424 915 aaKnown RBP eCLIP13.65□□□□□ -0.22
SMARCAL1-201ENST00000357276 FAM76AQ8TAV0 307 aa13.65□□□□□ -0.22
SMARCAL1-201ENST00000357276 DNAJC7Q99615 494 aa13.65□□□□□ -0.22
SMARCAL1-201ENST00000357276 CHP1Q99653 195 aa13.65□□□□□ -0.22
SMARCAL1-201ENST00000357276 MYL10Q9BUA6 226 aa13.65□□□□□ -0.22
SMARCAL1-201ENST00000357276 HDAC6Q9UBN7 1215 aa13.65□□□□□ -0.22
SMARCAL1-201ENST00000357276 KCNJ14Q9UNX9 436 aa13.65□□□□□ -0.22
SMARCAL1-201ENST00000357276 FAM169AQ9Y6X4 670 aa13.65□□□□□ -0.22
SMARCAL1-201ENST00000357276 MYH2Q9UKX2 1941 aa13.65□□□□□ -0.22
SMARCAL1-201ENST00000357276 DOCK2Q92608 1830 aa13.65□□□□□ -0.22
SMARCAL1-201ENST00000357276 RIC1Q4ADV7 1423 aa13.65□□□□□ -0.22
SMARCAL1-201ENST00000357276 COPB1P53618 953 aaKnown RBP13.65□□□□□ -0.23
SMARCAL1-201ENST00000357276 HERVK_113P62684 666 aa13.65□□□□□ -0.23
SMARCAL1-201ENST00000357276 SART3Q15020 963 aaKnown RBP13.65□□□□□ -0.23
SMARCAL1-201ENST00000357276 MICALL1Q8N3F8 863 aa13.65□□□□□ -0.23
SMARCAL1-201ENST00000357276 RUBCNQ92622 972 aa13.65□□□□□ -0.23
SMARCAL1-201ENST00000357276 COL16A1Q07092 1604 aaPredicted RBP13.64□□□□□ -0.23
SMARCAL1-201ENST00000357276 PLCH1Q4KWH8 1693 aa13.64□□□□□ -0.23
SMARCAL1-201ENST00000357276 PHLPP1O60346 1717 aa13.64□□□□□ -0.23
SMARCAL1-201ENST00000357276 NR5A1Q13285 461 aa13.64□□□□□ -0.23
SMARCAL1-201ENST00000357276 KLHL10Q6JEL2 608 aa13.64□□□□□ -0.23
SMARCAL1-201ENST00000357276 PI16Q6UXB8 463 aa13.64□□□□□ -0.23
SMARCAL1-201ENST00000357276 GBP6Q6ZN66 633 aa13.64□□□□□ -0.23
SMARCAL1-201ENST00000357276 ZNF572Q7Z3I7 529 aaPredicted RBP13.64□□□□□ -0.23
SMARCAL1-201ENST00000357276 CCDC91Q7Z6B0 441 aa13.64□□□□□ -0.23
SMARCAL1-201ENST00000357276 TOMM22Q9NS69 142 aa13.64□□□□□ -0.23
SMARCAL1-201ENST00000357276 RWDD2AQ9UIY3 292 aa13.64□□□□□ -0.23
SMARCAL1-201ENST00000357276 IQSEC3Q9UPP2 1182 aaPredicted RBP13.64□□□□□ -0.23
SMARCAL1-201ENST00000357276 TACC3Q9Y6A5 838 aa13.64□□□□□ -0.23
SMARCAL1-201ENST00000357276 EIF3HO15372 352 aaKnown RBP eCLIP13.64□□□□□ -0.23
SMARCAL1-201ENST00000357276 SPAG1Q07617 926 aa13.64□□□□□ -0.23
SMARCAL1-201ENST00000357276 UBE3CQ15386 1083 aa13.64□□□□□ -0.23
SMARCAL1-201ENST00000357276 TMEM67Q5HYA8 995 aa13.64□□□□□ -0.23
SMARCAL1-201ENST00000357276 SMYD4Q8IYR2 804 aaPredicted RBP13.64□□□□□ -0.23
SMARCAL1-201ENST00000357276 CNPY4Q8N129 248 aa13.64□□□□□ -0.23
SMARCAL1-201ENST00000357276 EPB41P11171 864 aaKnown RBP13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 HNRNPH1P31943 449 aaKnown RBP13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 KRT9P35527 623 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 MCAMP43121 646 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 CKAP4Q07065 602 aaKnown RBP13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 TCP11X2Q5H9J9 407 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 SHISA4Q96DD7 197 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 EPSTI1Q96J88 318 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 PURBQ96QR8 312 aaKnown RBP13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 SLC12A7Q9Y666 1083 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 PAPPAQ13219 1627 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 BCORQ6W2J9 1755 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 CASP1P29466 404 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 CCT6AP40227 531 aaKnown RBP13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 CCT5P48643 541 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 WDR59Q6PJI9 974 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 TTC5Q8N0Z6 440 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 OXER1Q8TDS5 423 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 ZSWIM5Q9P217 1185 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 GUCA1BQ9UMX6 200 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 COL5A2P05997 1499 aaPredicted RBP13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 WNK3Q9BYP7 1800 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 TCRBV5S4A2TA0A5A2 114 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 GOLGA6CA6NDK9 693 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 EBAG9O00559 213 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 N4BP3O15049 544 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 DEXIO95424 95 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 GOLGA6DP0CG33 693 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 PSEN1P49768 467 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 RCAN1P53805 252 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 SKOR1P84550 965 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 E2F4Q16254 413 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 CRACR2BQ8N4Y2 399 aaPredicted RBP13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 PRPF38AQ8NAV1 312 aaKnown RBP13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 DCAF5Q96JK2 942 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 NUP88Q99567 741 aaPredicted RBP13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 GOLGA6AQ9NYA3 693 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 FAM184BQ9ULE4 1060 aa13.63□□□□□ -0.23
SMARCAL1-201ENST00000357276 ANO9A1A5B4 782 aa13.62□□□□□ -0.23
SMARCAL1-201ENST00000357276 PDE2AO00408 941 aaPredicted RBP13.62□□□□□ -0.23
SMARCAL1-201ENST00000357276 ENC1O14682 589 aa13.62□□□□□ -0.23
SMARCAL1-201ENST00000357276 AFMP43652 599 aa13.62□□□□□ -0.23
SMARCAL1-201ENST00000357276 ITIH3Q06033 890 aa13.62□□□□□ -0.23
SMARCAL1-201ENST00000357276 MEA1Q16626 185 aa13.62□□□□□ -0.23
SMARCAL1-201ENST00000357276 NFXL1Q6ZNB6 911 aa13.62□□□□□ -0.23
SMARCAL1-201ENST00000357276 TTLL7Q6ZT98 887 aa13.62□□□□□ -0.23
SMARCAL1-201ENST00000357276 CTNND2Q9UQB3 1225 aa13.62□□□□□ -0.23
SMARCAL1-201ENST00000357276 XDHP47989 1333 aa13.62□□□□□ -0.23
SMARCAL1-201ENST00000357276 ARAP2Q8WZ64 1704 aa13.62□□□□□ -0.23
SMARCAL1-201ENST00000357276 SRGAP2O75044 1071 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms