RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 STRN3Q13033 797 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 PEX26Q7Z412 305 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 TRIM6Q9C030 488 aaPredicted RBP7.25□□□□□ -1.25
VPS13B-202ENST00000357162 STOML1Q9UBI4 398 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 CAPN7Q9Y6W3 813 aa7.25□□□□□ -1.25
VPS13B-202ENST00000357162 LAMC1P11047 1609 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 ZNF449Q6P9G9 518 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 CACNA1IQ9P0X4 2223 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 CTNNA1P35221 906 aaKnown RBP7.24□□□□□ -1.25
VPS13B-202ENST00000357162 NCBP1Q09161 790 aaKnown RBP7.24□□□□□ -1.25
VPS13B-202ENST00000357162 RMDN2Q96LZ7 410 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 RABEP2Q9H5N1 569 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 USP19O94966 1318 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 UBLCP1Q8WVY7 318 aaPredicted RBP7.24□□□□□ -1.25
VPS13B-202ENST00000357162 IFT122Q9HBG6 1241 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 ASCC3Q8N3C0 2202 aaKnown RBP7.24□□□□□ -1.25
VPS13B-202ENST00000357162 RFX1P22670 979 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 ANKRD13DQ6ZTN6 518 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 ZSWIM4Q9H7M6 989 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 ZNF215Q9UL58 517 aaPredicted RBP7.24□□□□□ -1.25
VPS13B-202ENST00000357162 SCINQ9Y6U3 715 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 PTPDC1A2A3K4 754 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 GIPC1O14908 333 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 BCAS4Q8TDM0 211 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 RTEL1Q9NZ71 1219 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 TCERG1LQ5VWI1 586 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 AK8Q96MA6 479 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 MXD3Q9BW11 206 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 LZTFL1Q9NQ48 299 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 NPATQ14207 1427 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 STX2P32856 288 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 CUL4AQ13619 759 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 TEDDM1Q5T9Z0 273 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 PPP4R3CPQ6ZMV5 832 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 MAK16Q9BXY0 300 aaKnown RBP7.24□□□□□ -1.25
VPS13B-202ENST00000357162 OSBPL5Q9H0X9 879 aaPredicted RBP7.24□□□□□ -1.25
VPS13B-202ENST00000357162 PPP2R2CQ9Y2T4 447 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 CCDC184Q52MB2 194 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 SH2D4AQ9H788 454 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 HEATR1Q9H583 2144 aaKnown RBP7.24□□□□□ -1.25
VPS13B-202ENST00000357162 CNOT1A5YKK6 2376 aaKnown RBP7.24□□□□□ -1.25
VPS13B-202ENST00000357162 MYO1CO00159 1063 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 OGFOD1Q8N543 542 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 ZKSCAN3Q9BRR0 538 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 A0A1B0GW55 424 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 DUX4L2P0CJ85 424 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 DUX4L3P0CJ86 424 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 DUX4L4P0CJ87 422 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 DUX4L5P0CJ88 424 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 DUX4L6P0CJ89 424 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 DUX4L7P0CJ90 424 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 TXNDC2Q86VQ3 553 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 DUX4Q9UBX2 424 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 SAMD9Q5K651 1589 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 TTI1O43156 1089 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 HHATQ5VTY9 493 aa7.24□□□□□ -1.25
VPS13B-202ENST00000357162 SPECC1L-ADORA2AF8WAN1 911 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 PNMA6AP0CW24 399 aaPredicted RBP7.23□□□□□ -1.25
VPS13B-202ENST00000357162 CCDC188H7C350 402 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 KIF11P52732 1056 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 PPP2R5AQ15172 486 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 DHTKD1Q96HY7 919 aaPredicted RBP7.23□□□□□ -1.25
VPS13B-202ENST00000357162 RIC8AQ9NPQ8 531 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 SLC26A4O43511 780 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 TPD52P55327 224 aaPredicted RBP7.23□□□□□ -1.25
VPS13B-202ENST00000357162 PFDN6O15212 129 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 DCTN3O75935 186 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 ALCAMQ13740 583 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 ARHGEF18Q6ZSZ5 1173 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 PBKQ96KB5 322 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 TSPY2A6NKD2 308 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 SPOPO43791 374 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 UBE3BQ7Z3V4 1068 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 CPLX3Q8WVH0 158 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 FAF1Q9UNN5 650 aaPredicted RBP7.23□□□□□ -1.25
VPS13B-202ENST00000357162 PER1O15534 1290 aaPredicted RBP7.23□□□□□ -1.25
VPS13B-202ENST00000357162 NNTQ13423 1086 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 ANKRD20A4Q4UJ75 823 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 ANKRD20A8PQ5CZ79 823 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 ANKRD20A2Q5SQ80 823 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 SYCP2LQ5T4T6 812 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 ANKRD20A1Q5TYW2 823 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.23□□□□□ -1.25
VPS13B-202ENST00000357162 SDCCAG3Q96C92 435 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 PFDN1O60925 122 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 SPATA1Q5VX52 437 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 KIF2CQ99661 725 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 NBPF3Q9H094 633 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 FANCAO15360 1455 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 MYH7P12883 1935 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 CHL1O00533 1208 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 ZFXP17010 805 aaPredicted RBP7.23□□□□□ -1.25
VPS13B-202ENST00000357162 RCSD1Q6JBY9 416 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 EIF4G3O43432 1585 aaKnown RBP7.23□□□□□ -1.25
VPS13B-202ENST00000357162 MCM10Q7L590 875 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 CSGALNACT2Q8N6G5 542 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 TTC25Q96NG3 672 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 NOC4LQ9BVI4 516 aaKnown RBP7.23□□□□□ -1.25
VPS13B-202ENST00000357162 PRDM11Q9NQV5 511 aa7.23□□□□□ -1.25
VPS13B-202ENST00000357162 HPDP32754 393 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms