RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 TTF2Q9UNY4 1162 aaKnown RBP15.08■□□□□ 0
NCDN-201ENST00000356090 TRIM49BA6NDI0 452 aa15.07■□□□□ 0
NCDN-201ENST00000356090 IGHMBP2P38935 993 aaKnown RBP15.07■□□□□ 0
NCDN-201ENST00000356090 PAK1Q13153 545 aa15.07■□□□□ 0
NCDN-201ENST00000356090 CASP8Q14790 479 aa15.07■□□□□ 0
NCDN-201ENST00000356090 IQUBQ8NA54 791 aa15.07■□□□□ 0
NCDN-201ENST00000356090 CTCFLQ8NI51 663 aaPredicted RBP15.07■□□□□ 0
NCDN-201ENST00000356090 PIGBQ92521 554 aa15.07■□□□□ 0
NCDN-201ENST00000356090 TRIM47Q96LD4 638 aa15.07■□□□□ 0
NCDN-201ENST00000356090 PSMB7Q99436 277 aa15.07■□□□□ 0
NCDN-201ENST00000356090 MACROD2A1Z1Q3 448 aa15.07■□□□□ 0
NCDN-201ENST00000356090 POTEB2H3BUK9 544 aa15.07■□□□□ 0
NCDN-201ENST00000356090 CUL4BQ13620 913 aa15.07■□□□□ 0
NCDN-201ENST00000356090 FAM47AQ5JRC9 791 aa15.07■□□□□ 0
NCDN-201ENST00000356090 GSPT2Q8IYD1 628 aaKnown RBP15.07■□□□□ 0
NCDN-201ENST00000356090 MAGEC2Q9UBF1 373 aaPredicted RBP15.07■□□□□ 0
NCDN-201ENST00000356090 KCNJ18B7U540 433 aa15.07■□□□□ 0
NCDN-201ENST00000356090 MYO1CO00159 1063 aa15.07■□□□□ 0
NCDN-201ENST00000356090 STAT6P42226 847 aa15.07■□□□□ 0
NCDN-201ENST00000356090 KCNJ12Q14500 433 aa15.07■□□□□ 0
NCDN-201ENST00000356090 CYP26C1Q6V0L0 522 aa15.07■□□□□ 0
NCDN-201ENST00000356090 TMTC1Q8IUR5 882 aa15.07■□□□□ 0
NCDN-201ENST00000356090 RASGRP4Q8TDF6 673 aa15.07■□□□□ 0
NCDN-201ENST00000356090 MYO6Q9UM54 1294 aa15.07■□□□□ 0
NCDN-201ENST00000356090 SOS2Q07890 1332 aaPredicted RBP15.06■□□□□ 0
NCDN-201ENST00000356090 MAGEB6P1A0A0J9YX57 407 aa15.06■□□□□ 0
NCDN-201ENST00000356090 SARSP49591 514 aaKnown RBP15.06■□□□□ 0
NCDN-201ENST00000356090 COPB1P53618 953 aaKnown RBP15.06■□□□□ 0
NCDN-201ENST00000356090 PIP4K2BP78356 416 aa15.06■□□□□ 0
NCDN-201ENST00000356090 NAA15Q9BXJ9 866 aaKnown RBP15.06■□□□□ 0
NCDN-201ENST00000356090 GBP3Q9H0R5 595 aa15.06■□□□□ 0
NCDN-201ENST00000356090 FEZ2Q9UHY8 353 aaPredicted RBP15.06■□□□□ 0
NCDN-201ENST00000356090 TRIM21P19474 475 aaKnown RBP15.06■□□□□ 0
NCDN-201ENST00000356090 GYG1P46976 350 aa15.06■□□□□ 0
NCDN-201ENST00000356090 ERVK-24P63145 666 aa15.06■□□□□ 0
NCDN-201ENST00000356090 DYNLL1P63167 89 aaKnown RBP15.06■□□□□ 0
NCDN-201ENST00000356090 DPYDQ12882 1025 aa15.06■□□□□ 0
NCDN-201ENST00000356090 TICAM2Q86XR7 235 aa15.06■□□□□ 0
NCDN-201ENST00000356090 STK36Q9NRP7 1315 aa15.06■□□□□ 0
NCDN-201ENST00000356090 FAM237AA0A1B0GTK4 181 aa15.05■□□□□ 0
NCDN-201ENST00000356090 NMT2O60551 498 aa15.05■□□□□ 0
NCDN-201ENST00000356090 ACTN2P35609 894 aa15.05■□□□□ 0
NCDN-201ENST00000356090 DNAJC21Q5F1R6 531 aaKnown RBP15.05■□□□□ 0
NCDN-201ENST00000356090 EXOC4Q96A65 974 aa15.05■□□□□ 0
NCDN-201ENST00000356090 CRACR2AQ9BSW2 395 aa15.05■□□□□ 0
NCDN-201ENST00000356090 LUC7L2Q9Y383 392 aaKnown RBP15.05■□□□□ 0
NCDN-201ENST00000356090 RNF225M0QZC1 329 aaPredicted RBP15.05■□□□□ -0
NCDN-201ENST00000356090 BEND6Q5SZJ8 279 aaPredicted RBP15.05■□□□□ -0
NCDN-201ENST00000356090 BICDL1Q6ZP65 573 aa15.05■□□□□ -0
NCDN-201ENST00000356090 RIN2Q8WYP3 895 aaPredicted RBP15.05■□□□□ -0
NCDN-201ENST00000356090 ABHD10Q9NUJ1 306 aa15.05■□□□□ -0
NCDN-201ENST00000356090 GNL3LQ9NVN8 582 aaKnown RBP15.05■□□□□ -0
NCDN-201ENST00000356090 TMEM94Q12767 1356 aa15.05■□□□□ -0
NCDN-201ENST00000356090 TCRBV5S4A2TA0A5A2 114 aa15.05■□□□□ -0
NCDN-201ENST00000356090 NAP1L1P55209 391 aaKnown RBP15.05■□□□□ -0
NCDN-201ENST00000356090 PPARDQ03181 441 aa15.05■□□□□ -0
NCDN-201ENST00000356090 FOXR1Q6PIV2 292 aa15.05■□□□□ -0
NCDN-201ENST00000356090 GOLGA5Q8TBA6 731 aa15.05■□□□□ -0
NCDN-201ENST00000356090 GSDMAQ96QA5 445 aa15.05■□□□□ -0
NCDN-201ENST00000356090 FAM204AQ9H8W3 233 aa15.05■□□□□ -0
NCDN-201ENST00000356090 RRP15Q9Y3B9 282 aaKnown RBP15.05■□□□□ -0
NCDN-201ENST00000356090 EPN1Q9Y6I3 576 aaPredicted RBP15.05■□□□□ -0
NCDN-201ENST00000356090 CTR9Q6PD62 1173 aa15.04■□□□□ -0
NCDN-201ENST00000356090 ZNHIT6Q9NWK9 470 aaKnown RBP15.04■□□□□ -0
NCDN-201ENST00000356090 AATFQ9NY61 560 aaKnown RBP eCLIP15.04■□□□□ -0
NCDN-201ENST00000356090 WDR17Q8IZU2 1322 aa15.04■□□□□ -0
NCDN-201ENST00000356090 GPKOWQ92917 476 aaPredicted RBP eCLIP15.04■□□□□ -0
NCDN-201ENST00000356090 SMARCC1Q92922 1105 aaPredicted RBP15.04■□□□□ -0
NCDN-201ENST00000356090 ENAHQ8N8S7 591 aaPredicted RBP15.04■□□□□ -0
NCDN-201ENST00000356090 ZNF579Q8NAF0 562 aaKnown RBP15.04■□□□□ -0
NCDN-201ENST00000356090 MYH15Q9Y2K3 1946 aa15.03■□□□□ -0
NCDN-201ENST00000356090 PPP1R3GB7ZBB8 358 aa15.03■□□□□ -0
NCDN-201ENST00000356090 GNAT2P19087 354 aa15.03■□□□□ -0
NCDN-201ENST00000356090 RASGRP2Q7LDG7 609 aa15.03■□□□□ -0
NCDN-201ENST00000356090 CERS3Q8IU89 383 aa15.03■□□□□ -0
NCDN-201ENST00000356090 ZSCAN10Q96SZ4 725 aaPredicted RBP15.03■□□□□ -0
NCDN-201ENST00000356090 RIC1Q4ADV7 1423 aa15.03■□□□□ -0
NCDN-201ENST00000356090 ARFGEF2Q9Y6D5 1785 aa15.03■□□□□ -0
NCDN-201ENST00000356090 CYP27A1Q02318 531 aa15.03■□□□□ -0
NCDN-201ENST00000356090 CCDC178Q5BJE1 867 aa15.03■□□□□ -0
NCDN-201ENST00000356090 CADPS2Q86UW7 1296 aa15.03■□□□□ -0
NCDN-201ENST00000356090 STAG1Q8WVM7 1258 aa15.03■□□□□ -0
NCDN-201ENST00000356090 FERMT2Q96AC1 680 aa15.03■□□□□ -0
NCDN-201ENST00000356090 RNF26Q9BY78 433 aaPredicted RBP15.03■□□□□ -0
NCDN-201ENST00000356090 TSPY2A6NKD2 308 aa15.02■□□□□ -0
NCDN-201ENST00000356090 PP2D1A8MPX8 630 aa15.02■□□□□ -0
NCDN-201ENST00000356090 USP17L12C9JPN9 530 aa15.02■□□□□ -0
NCDN-201ENST00000356090 USP17L21D6R901 530 aa15.02■□□□□ -0
NCDN-201ENST00000356090 ARID4AP29374 1257 aaPredicted RBP15.02■□□□□ -0
NCDN-201ENST00000356090 UBA7P41226 1012 aa15.02■□□□□ -0
NCDN-201ENST00000356090 SPAG1Q07617 926 aa15.02■□□□□ -0
NCDN-201ENST00000356090 TSPYL1Q9H0U9 437 aa15.02■□□□□ -0
NCDN-201ENST00000356090 RTL9Q8NET4 1388 aa15.02■□□□□ -0
NCDN-201ENST00000356090 ABCC12Q96J65 1359 aa15.02■□□□□ -0
NCDN-201ENST00000356090 WTIPA6NIX2 430 aaPredicted RBP15.02■□□□□ -0
NCDN-201ENST00000356090 MTIF2P46199 727 aaKnown RBP15.02■□□□□ -0
NCDN-201ENST00000356090 NT5DC1Q5TFE4 455 aa15.02■□□□□ -0
NCDN-201ENST00000356090 FER1L4A9Z1Z3 1794 aa15.02□□□□□ -0.01
NCDN-201ENST00000356090 TTC26A0AVF1 554 aa15.02□□□□□ -0.01
NCDN-201ENST00000356090 NDUFA10O95299 355 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms