RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 HAUS4Q9H6D7 363 aa12.9□□□□□ -0.34
CAPN9-202ENST00000354537 ZSWIM4Q9H7M6 989 aa12.9□□□□□ -0.34
CAPN9-202ENST00000354537 BRMS1Q9HCU9 246 aa12.9□□□□□ -0.34
CAPN9-202ENST00000354537 RBM28Q9NW13 759 aaKnown RBP12.9□□□□□ -0.34
CAPN9-202ENST00000354537 RRP15Q9Y3B9 282 aaKnown RBP12.9□□□□□ -0.34
CAPN9-202ENST00000354537 A0A087X0B3 334 aa12.9□□□□□ -0.34
CAPN9-202ENST00000354537 N4BP3O15049 544 aa12.9□□□□□ -0.34
CAPN9-202ENST00000354537 GTPBP6O43824 516 aaPredicted RBP12.9□□□□□ -0.34
CAPN9-202ENST00000354537 PDE8AO60658 829 aa12.9□□□□□ -0.34
CAPN9-202ENST00000354537 STARD3NLO95772 234 aa12.9□□□□□ -0.34
CAPN9-202ENST00000354537 SLC5A1P13866 664 aa12.9□□□□□ -0.34
CAPN9-202ENST00000354537 TRAPPC10P48553 1259 aa12.9□□□□□ -0.34
CAPN9-202ENST00000354537 ERVK-24P63145 666 aa12.9□□□□□ -0.34
CAPN9-202ENST00000354537 TMED8Q6PL24 325 aaPredicted RBP12.9□□□□□ -0.34
CAPN9-202ENST00000354537 MAGEB6Q8N7X4 407 aa12.9□□□□□ -0.34
CAPN9-202ENST00000354537 A0A1W2PQC6 194 aa12.89□□□□□ -0.35
CAPN9-202ENST00000354537 CALM1P0DP23 149 aa12.89□□□□□ -0.35
CAPN9-202ENST00000354537 CALM2P0DP24 149 aa12.89□□□□□ -0.35
CAPN9-202ENST00000354537 CALM3P0DP25 149 aa12.89□□□□□ -0.35
CAPN9-202ENST00000354537 AFMP43652 599 aa12.89□□□□□ -0.35
CAPN9-202ENST00000354537 SEC23AQ15436 765 aa12.89□□□□□ -0.35
CAPN9-202ENST00000354537 TRAPPC11Q7Z392 1133 aa12.89□□□□□ -0.35
CAPN9-202ENST00000354537 EHBP1Q8NDI1 1231 aa12.89□□□□□ -0.35
CAPN9-202ENST00000354537 EPSTI1Q96J88 318 aa12.89□□□□□ -0.35
CAPN9-202ENST00000354537 CCDC85AQ96PX6 553 aaPredicted RBP12.89□□□□□ -0.35
CAPN9-202ENST00000354537 INCENPQ9NQS7 918 aa12.89□□□□□ -0.35
CAPN9-202ENST00000354537 BCORQ6W2J9 1755 aa12.89□□□□□ -0.35
CAPN9-202ENST00000354537 H7C1D1 291 aa12.89□□□□□ -0.35
CAPN9-202ENST00000354537 TDO2P48775 406 aa12.89□□□□□ -0.35
CAPN9-202ENST00000354537 USP14P54578 494 aa12.89□□□□□ -0.35
CAPN9-202ENST00000354537 GYS2P54840 703 aa12.89□□□□□ -0.35
CAPN9-202ENST00000354537 STX17P56962 302 aa12.89□□□□□ -0.35
CAPN9-202ENST00000354537 ATP2C1P98194 919 aaPredicted RBP12.89□□□□□ -0.35
CAPN9-202ENST00000354537 E2F4Q16254 413 aa12.89□□□□□ -0.35
CAPN9-202ENST00000354537 KLHL10Q6JEL2 608 aa12.89□□□□□ -0.35
CAPN9-202ENST00000354537 GOLGA6L1Q8N7Z2 621 aa12.89□□□□□ -0.35
CAPN9-202ENST00000354537 ESR2Q92731 530 aa12.89□□□□□ -0.35
CAPN9-202ENST00000354537 UBAC1Q9BSL1 405 aa12.89□□□□□ -0.35
CAPN9-202ENST00000354537 ARMT1Q9H993 441 aa12.89□□□□□ -0.35
CAPN9-202ENST00000354537 FAN1Q9Y2M0 1017 aa12.89□□□□□ -0.35
CAPN9-202ENST00000354537 EPN1Q9Y6I3 576 aaPredicted RBP12.89□□□□□ -0.35
CAPN9-202ENST00000354537 IRS4O14654 1257 aaPredicted RBP12.88□□□□□ -0.35
CAPN9-202ENST00000354537 PCP11498 1178 aaKnown RBP12.88□□□□□ -0.35
CAPN9-202ENST00000354537 IL2RBP14784 551 aa12.88□□□□□ -0.35
CAPN9-202ENST00000354537 CKAP4Q07065 602 aaKnown RBP12.88□□□□□ -0.35
CAPN9-202ENST00000354537 FUT2Q10981 343 aa12.88□□□□□ -0.35
CAPN9-202ENST00000354537 PAK1Q13153 545 aa12.88□□□□□ -0.35
CAPN9-202ENST00000354537 PKN1Q16512 942 aa12.88□□□□□ -0.35
CAPN9-202ENST00000354537 TCP11X2Q5H9J9 407 aa12.88□□□□□ -0.35
CAPN9-202ENST00000354537 ZNF658Q5TYW1 1059 aaPredicted RBP12.88□□□□□ -0.35
CAPN9-202ENST00000354537 ACRBPQ8NEB7 543 aa12.88□□□□□ -0.35
CAPN9-202ENST00000354537 TNFRSF25Q93038 417 aa12.88□□□□□ -0.35
CAPN9-202ENST00000354537 CDC5LQ99459 802 aaKnown RBP12.88□□□□□ -0.35
CAPN9-202ENST00000354537 TRIM34Q9BYJ4 488 aa12.88□□□□□ -0.35
CAPN9-202ENST00000354537 SLC4A4Q9Y6R1 1079 aa12.88□□□□□ -0.35
CAPN9-202ENST00000354537 A0A0U1RQJ8 604 aa12.88□□□□□ -0.35
CAPN9-202ENST00000354537 RHOXF2BP0C7M4 288 aa12.88□□□□□ -0.35
CAPN9-202ENST00000354537 PAPD7Q5XG87 772 aaKnown RBP12.88□□□□□ -0.35
CAPN9-202ENST00000354537 ATRIPQ8WXE1 791 aa12.88□□□□□ -0.35
CAPN9-202ENST00000354537 RUBCNQ92622 972 aa12.88□□□□□ -0.35
CAPN9-202ENST00000354537 NUP88Q99567 741 aaPredicted RBP12.88□□□□□ -0.35
CAPN9-202ENST00000354537 RHOXF2Q9BQY4 288 aa12.88□□□□□ -0.35
CAPN9-202ENST00000354537 CARD10Q9BWT7 1032 aa12.88□□□□□ -0.35
CAPN9-202ENST00000354537 NDUFA10O95299 355 aa12.87□□□□□ -0.35
CAPN9-202ENST00000354537 MYH3P11055 1940 aa12.87□□□□□ -0.35
CAPN9-202ENST00000354537 KRT9P35527 623 aa12.87□□□□□ -0.35
CAPN9-202ENST00000354537 OR8K1Q8NGG5 319 aa12.87□□□□□ -0.35
CAPN9-202ENST00000354537 CABLES1Q8TDN4 633 aa12.87□□□□□ -0.35
CAPN9-202ENST00000354537 TRERF1Q96PN7 1200 aa12.87□□□□□ -0.35
CAPN9-202ENST00000354537 DNAJC7Q99615 494 aa12.87□□□□□ -0.35
CAPN9-202ENST00000354537 CTNND2Q9UQB3 1225 aa12.87□□□□□ -0.35
CAPN9-202ENST00000354537 ANKRD36CQ5JPF3 1778 aa12.87□□□□□ -0.35
CAPN9-202ENST00000354537 XDHP47989 1333 aa12.87□□□□□ -0.35
CAPN9-202ENST00000354537 ERVV-1B6SEH8 477 aa12.87□□□□□ -0.35
CAPN9-202ENST00000354537 KCNJ18B7U540 433 aa12.87□□□□□ -0.35
CAPN9-202ENST00000354537 MAGEA9P43362 315 aa12.87□□□□□ -0.35
CAPN9-202ENST00000354537 KRT83P78385 493 aa12.87□□□□□ -0.35
CAPN9-202ENST00000354537 PPARAQ07869 468 aa12.87□□□□□ -0.35
CAPN9-202ENST00000354537 SF3B2Q13435 895 aaKnown RBP12.87□□□□□ -0.35
CAPN9-202ENST00000354537 KCNJ12Q14500 433 aa12.87□□□□□ -0.35
CAPN9-202ENST00000354537 TTC38Q5R3I4 469 aa12.87□□□□□ -0.35
CAPN9-202ENST00000354537 RRAGBQ5VZM2 374 aa12.87□□□□□ -0.35
CAPN9-202ENST00000354537 PDXDC2PQ6P474 469 aa12.87□□□□□ -0.35
CAPN9-202ENST00000354537 NUP133Q8WUM0 1156 aa12.87□□□□□ -0.35
CAPN9-202ENST00000354537 MYL1P05976 194 aa12.86□□□□□ -0.35
CAPN9-202ENST00000354537 ATP2B1P20020 1258 aa12.86□□□□□ -0.35
CAPN9-202ENST00000354537 EEF1GP26641 437 aaKnown RBP12.86□□□□□ -0.35
CAPN9-202ENST00000354537 RASGRF1Q13972 1273 aa12.86□□□□□ -0.35
CAPN9-202ENST00000354537 RRP12Q5JTH9 1297 aaKnown RBP12.86□□□□□ -0.35
CAPN9-202ENST00000354537 ARL6IP4Q66PJ3 421 aaKnown RBP12.86□□□□□ -0.35
CAPN9-202ENST00000354537 TOM1L2Q6ZVM7 507 aa12.86□□□□□ -0.35
CAPN9-202ENST00000354537 NOC3LQ8WTT2 800 aaKnown RBP12.86□□□□□ -0.35
CAPN9-202ENST00000354537 CCDC102AQ96A19 550 aa12.86□□□□□ -0.35
CAPN9-202ENST00000354537 TMOD3Q9NYL9 352 aa12.86□□□□□ -0.35
CAPN9-202ENST00000354537 SHANK3Q9BYB0 1731 aa12.86□□□□□ -0.35
CAPN9-202ENST00000354537 DDAH1O94760 285 aa12.86□□□□□ -0.35
CAPN9-202ENST00000354537 CATIPQ7Z7H3 387 aa12.86□□□□□ -0.35
CAPN9-202ENST00000354537 LCORLQ8N3X6 602 aa12.86□□□□□ -0.35
CAPN9-202ENST00000354537 NOA1Q8NC60 698 aaKnown RBP12.86□□□□□ -0.35
CAPN9-202ENST00000354537 IPO4Q8TEX9 1081 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms