RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 RAB11FIP4Q86YS3 637 aa4.23□□□□□ -1.73
RNF38-203ENST00000353739 SDR42E1Q8WUS8 393 aa4.23□□□□□ -1.73
RNF38-203ENST00000353739 CELF1Q92879 486 aaKnown RBP4.23□□□□□ -1.73
RNF38-203ENST00000353739 ERO1AQ96HE7 468 aa4.23□□□□□ -1.73
RNF38-203ENST00000353739 EYA3Q99504 573 aa4.23□□□□□ -1.73
RNF38-203ENST00000353739 SPZ1Q9BXG8 430 aa4.23□□□□□ -1.73
RNF38-203ENST00000353739 ARGLU1Q9NWB6 273 aaPredicted RBP4.23□□□□□ -1.73
RNF38-203ENST00000353739 MCM9Q9NXL9 1143 aa4.23□□□□□ -1.73
RNF38-203ENST00000353739 ITIH6Q6UXX5 1313 aa4.23□□□□□ -1.73
RNF38-203ENST00000353739 MYH14Q7Z406 1995 aaKnown RBP4.23□□□□□ -1.73
RNF38-203ENST00000353739 BTBD18B2RXH4 712 aa4.23□□□□□ -1.73
RNF38-203ENST00000353739 USP17L12C9JPN9 530 aa4.23□□□□□ -1.73
RNF38-203ENST00000353739 USP17L21D6R901 530 aa4.23□□□□□ -1.73
RNF38-203ENST00000353739 CTIFO43310 598 aaKnown RBP4.23□□□□□ -1.73
RNF38-203ENST00000353739 FGFR1OPO95684 399 aaKnown RBP4.23□□□□□ -1.73
RNF38-203ENST00000353739 SARSP49591 514 aaKnown RBP4.23□□□□□ -1.73
RNF38-203ENST00000353739 FKBP1AP62942 108 aaKnown RBP4.23□□□□□ -1.73
RNF38-203ENST00000353739 MDM2Q00987 491 aaPredicted RBP4.23□□□□□ -1.73
RNF38-203ENST00000353739 TRAF1Q13077 416 aa4.23□□□□□ -1.73
RNF38-203ENST00000353739 PNOCQ13519 176 aa4.23□□□□□ -1.73
RNF38-203ENST00000353739 SPATA1Q5VX52 437 aa4.23□□□□□ -1.73
RNF38-203ENST00000353739 CCAR2Q8N163 923 aaKnown RBP4.23□□□□□ -1.73
RNF38-203ENST00000353739 STK11IPQ8N1F8 1099 aa4.23□□□□□ -1.73
RNF38-203ENST00000353739 ZNF830Q96NB3 372 aaPredicted RBP4.23□□□□□ -1.73
RNF38-203ENST00000353739 MYL10Q9BUA6 226 aa4.23□□□□□ -1.73
RNF38-203ENST00000353739 XPO4Q9C0E2 1151 aaKnown RBP4.23□□□□□ -1.73
RNF38-203ENST00000353739 BCL2L12Q9HB09 334 aa4.23□□□□□ -1.73
RNF38-203ENST00000353739 ANO8Q9HCE9 1232 aaPredicted RBP4.23□□□□□ -1.73
RNF38-203ENST00000353739 IRS2Q9Y4H2 1338 aa4.23□□□□□ -1.73
RNF38-203ENST00000353739 MYO5AQ9Y4I1 1855 aaKnown RBP4.23□□□□□ -1.73
RNF38-203ENST00000353739 MYH2Q9UKX2 1941 aa4.23□□□□□ -1.73
RNF38-203ENST00000353739 BICDL2A1A5D9 508 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 POTEB2H3BUK9 544 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 ACTN4O43707 911 aaKnown RBP4.22□□□□□ -1.73
RNF38-203ENST00000353739 PARP1P09874 1014 aaKnown RBP4.22□□□□□ -1.73
RNF38-203ENST00000353739 DYNLL1P63167 89 aaKnown RBP4.22□□□□□ -1.73
RNF38-203ENST00000353739 FAM193AP78312 1265 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 GRIPAP1Q4V328 841 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 ASPRV1Q53RT3 343 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 FAM196AQ6ZSG2 479 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 METTL16Q86W50 562 aaKnown RBP4.22□□□□□ -1.73
RNF38-203ENST00000353739 ARHGEF1Q92888 912 aaKnown RBP4.22□□□□□ -1.73
RNF38-203ENST00000353739 FAM163AQ96GL9 167 aaPredicted RBP4.22□□□□□ -1.73
RNF38-203ENST00000353739 FEZ1Q99689 392 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 ZKSCAN3Q9BRR0 538 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 ZNHIT6Q9NWK9 470 aaKnown RBP4.22□□□□□ -1.73
RNF38-203ENST00000353739 MAGEC2Q9UBF1 373 aaPredicted RBP4.22□□□□□ -1.73
RNF38-203ENST00000353739 SERTAD1Q9UHV2 236 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 RWDD2AQ9UIY3 292 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 KCNJ14Q9UNX9 436 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 MYH6P13533 1939 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 FOCADQ5VW36 1801 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 POLR2DO15514 142 aaKnown RBP4.22□□□□□ -1.73
RNF38-203ENST00000353739 STX10O60499 249 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 ALDH1B1P30837 517 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 CCZ1BP86790 482 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 CCZ1P86791 482 aaPredicted RBP4.22□□□□□ -1.73
RNF38-203ENST00000353739 TMEM266Q2M3C6 531 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 C16orf86Q6ZW13 317 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 ADGRA1Q86SQ6 560 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 CNGA4Q8IV77 575 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 GJD4Q96KN9 370 aaPredicted RBP4.22□□□□□ -1.73
RNF38-203ENST00000353739 PANX2Q96RD6 677 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 CCDC94Q9BW85 323 aaPredicted RBP4.22□□□□□ -1.73
RNF38-203ENST00000353739 COA1Q9GZY4 146 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 CSRNP2Q9H175 543 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 V9GY48 417 aaPredicted RBP4.22□□□□□ -1.73
RNF38-203ENST00000353739 ESYT2A0FGR8 921 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 HLA-DOAP06340 250 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 TROAPQ12815 778 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 PKN1Q16512 942 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 SPECC1LQ69YQ0 1117 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 WWC2Q6AWC2 1192 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 SP8Q8IXZ3 490 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 CACTINQ8WUQ7 758 aaKnown RBP4.22□□□□□ -1.73
RNF38-203ENST00000353739 UBR3Q6ZT12 1888 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 PCNTO95613 3336 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 FAM205AQ6ZU69 1335 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 UFL1O94874 794 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 HOXA10P31260 410 aaPredicted RBP4.22□□□□□ -1.73
RNF38-203ENST00000353739 PDE6BP35913 854 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 STAT6P42226 847 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 TOB1P50616 345 aaPredicted RBP4.22□□□□□ -1.73
RNF38-203ENST00000353739 FUT2Q10981 343 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 KCNB1Q14721 858 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 TSR1Q2NL82 804 aaKnown RBP4.22□□□□□ -1.73
RNF38-203ENST00000353739 LONRF3Q496Y0 759 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 CRY2Q49AN0 593 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 ZNF658Q5TYW1 1059 aaPredicted RBP4.22□□□□□ -1.73
RNF38-203ENST00000353739 DTHD1Q6ZMT9 781 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 NYAP1Q6ZVC0 841 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 SH3RF1Q7Z6J0 888 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 FILIP1Q7Z7B0 1213 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 PNMA1Q8ND90 353 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 SPATA20Q8TB22 786 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 TNFRSF25Q93038 417 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 PAGE5Q96GU1 130 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 VPS54Q9P1Q0 977 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 PCDHB6Q9Y5E3 794 aa4.22□□□□□ -1.73
RNF38-203ENST00000353739 NRXN2Q9P2S2 1712 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms