RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 PPARAQ07869 468 aa8.57□□□□□ -1.04
BRCA1-201ENST00000352993 IQCA1Q86XH1 822 aa8.57□□□□□ -1.04
BRCA1-201ENST00000352993 TICAM2Q86XR7 235 aa8.57□□□□□ -1.04
BRCA1-201ENST00000352993 TRIML1Q8N9V2 468 aa8.57□□□□□ -1.04
BRCA1-201ENST00000352993 PRPF38AQ8NAV1 312 aaKnown RBP8.57□□□□□ -1.04
BRCA1-201ENST00000352993 BLZF1Q9H2G9 400 aa8.57□□□□□ -1.04
BRCA1-201ENST00000352993 HAUS4Q9H6D7 363 aa8.57□□□□□ -1.04
BRCA1-201ENST00000352993 SEC31BQ9NQW1 1179 aa8.57□□□□□ -1.04
BRCA1-201ENST00000352993 KLC4Q9NSK0 619 aa8.57□□□□□ -1.04
BRCA1-201ENST00000352993 ZNHIT6Q9NWK9 470 aaKnown RBP8.57□□□□□ -1.04
BRCA1-201ENST00000352993 ANGEL1Q9UNK9 670 aaKnown RBP8.57□□□□□ -1.04
BRCA1-201ENST00000352993 LUC7L2Q9Y383 392 aaKnown RBP8.57□□□□□ -1.04
BRCA1-201ENST00000352993 NCAPD2Q15021 1401 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 USP54Q70EL1 1684 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 USP31Q70CQ4 1352 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 CD44P16070 742 aaKnown RBP8.56□□□□□ -1.04
BRCA1-201ENST00000352993 AMPD2Q01433 879 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 GUCY1A3Q02108 690 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 KRT31Q15323 416 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 EZH2Q15910 746 aaKnown RBP8.56□□□□□ -1.04
BRCA1-201ENST00000352993 CCDC40Q4G0X9 1142 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 ANKRD13DQ6ZTN6 518 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 TRAPPC11Q7Z392 1133 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 NOSTRINQ8IVI9 506 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 CMTR1Q8N1G2 835 aaKnown RBP8.56□□□□□ -1.04
BRCA1-201ENST00000352993 IFT81Q8WYA0 676 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 ZKSCAN4Q969J2 545 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-201ENST00000352993 CCDC85AQ96PX6 553 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-201ENST00000352993 CSRNP2Q9H175 543 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 CABP5Q9NP86 173 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 PPANQ9NQ55 473 aaKnown RBP8.56□□□□□ -1.04
BRCA1-201ENST00000352993 DENND2AQ9ULE3 1009 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 PCDHB6Q9Y5E3 794 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 MST1RQ04912 1400 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 E7EVH7 732 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 RNF225M0QZC1 329 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-201ENST00000352993 SHOX2O60902 331 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-201ENST00000352993 EZRP15311 586 aaKnown RBP8.56□□□□□ -1.04
BRCA1-201ENST00000352993 ANTXR2P58335 489 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 MDM2Q00987 491 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-201ENST00000352993 TMEM67Q5HYA8 995 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 CCDC121Q6ZUS5 278 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 TRIM22Q8IYM9 498 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 NUP133Q8WUM0 1156 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 ZNF594Q96JF6 807 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-201ENST00000352993 PAX7P23759 505 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 CALRP27797 417 aaKnown RBP8.56□□□□□ -1.04
BRCA1-201ENST00000352993 SEC24CP53992 1094 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 NNTQ13423 1086 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 CFAP58Q5T655 872 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 MAATS1Q7Z4T9 603 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 MB21D2Q8IYB1 491 aaPredicted RBP8.56□□□□□ -1.04
BRCA1-201ENST00000352993 RASSF8Q8NHQ8 419 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 RPGRIP1Q96KN7 1286 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 SLC12A7Q9Y666 1083 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 MYH8P13535 1937 aa8.56□□□□□ -1.04
BRCA1-201ENST00000352993 ROBO2Q9HCK4 1378 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 RNMTO43148 476 aaKnown RBP8.55□□□□□ -1.04
BRCA1-201ENST00000352993 CXCR5P32302 372 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 COPB1P53618 953 aaKnown RBP8.55□□□□□ -1.04
BRCA1-201ENST00000352993 NR5A1Q13285 461 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 CCDC96Q2M329 555 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 AKAP4Q5JQC9 854 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 EHBP1Q8NDI1 1231 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 OR8K1Q8NGG5 319 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 HDAC7Q8WUI4 952 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 EPSTI1Q96J88 318 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 LRRC1Q9BTT6 524 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.55□□□□□ -1.04
BRCA1-201ENST00000352993 TARSL2A2RTX5 802 aaKnown RBP8.55□□□□□ -1.04
BRCA1-201ENST00000352993 IFIT3O14879 490 aaKnown RBP8.55□□□□□ -1.04
BRCA1-201ENST00000352993 KRT14P02533 472 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 KRT83P78385 493 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 CYP27A1Q02318 531 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 SF3A3Q12874 501 aaKnown RBP eCLIP8.55□□□□□ -1.04
BRCA1-201ENST00000352993 TTF1Q15361 905 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-201ENST00000352993 AMOTL1Q8IY63 956 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 EEF2KMTQ96G04 330 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 SENP2Q9HC62 589 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 BCCIPQ9P287 314 aaKnown RBP eCLIP8.55□□□□□ -1.04
BRCA1-201ENST00000352993 KCNG1Q9UIX4 513 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 KCNJ18B7U540 433 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 UBAP1LF5GYI3 381 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 PTPREP23469 700 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 GUCY2FP51841 1108 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 APBA1Q02410 837 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 KIF5AQ12840 1032 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 KCNJ12Q14500 433 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 ODF2Q5BJF6 829 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 METTL22Q9BUU2 404 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-201ENST00000352993 DMGDHQ9UI17 866 aaKnown RBP8.55□□□□□ -1.04
BRCA1-201ENST00000352993 CEP131Q9UPN4 1083 aa8.55□□□□□ -1.04
BRCA1-201ENST00000352993 MON2Q7Z3U7 1717 aa8.54□□□□□ -1.04
BRCA1-201ENST00000352993 A0A1B0GUA9 196 aa8.54□□□□□ -1.04
BRCA1-201ENST00000352993 PDE2AO00408 941 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-201ENST00000352993 TRIM21P19474 475 aaKnown RBP8.54□□□□□ -1.04
BRCA1-201ENST00000352993 CYLC1P35663 651 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-201ENST00000352993 PDE6BP35913 854 aa8.54□□□□□ -1.04
BRCA1-201ENST00000352993 SNCBQ16143 134 aa8.54□□□□□ -1.04
BRCA1-201ENST00000352993 APOA5Q6Q788 366 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms