RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 NTSR2O95665 410 aa27.83■■■□□ 2.05
CPNE1-202ENST00000352393 ATP2C1P98194 919 aaPredicted RBP27.83■■■□□ 2.05
CPNE1-202ENST00000352393 TROAPQ12815 778 aa27.83■■■□□ 2.05
CPNE1-202ENST00000352393 TTC38Q5R3I4 469 aa27.83■■■□□ 2.05
CPNE1-202ENST00000352393 RASGRP2Q7LDG7 609 aa27.83■■■□□ 2.05
CPNE1-202ENST00000352393 BRMS1Q9HCU9 246 aa27.83■■■□□ 2.05
CPNE1-202ENST00000352393 LZTFL1Q9NQ48 299 aa27.83■■■□□ 2.05
CPNE1-202ENST00000352393 XDHP47989 1333 aa27.83■■■□□ 2.05
CPNE1-202ENST00000352393 FILIP1LQ4L180 1135 aa27.83■■■□□ 2.05
CPNE1-202ENST00000352393 NOM1Q5C9Z4 860 aaKnown RBP27.83■■■□□ 2.05
CPNE1-202ENST00000352393 TMTC3Q6ZXV5 915 aa27.83■■■□□ 2.05
CPNE1-202ENST00000352393 CCDC51Q96ER9 411 aa27.83■■■□□ 2.05
CPNE1-202ENST00000352393 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.83■■■□□ 2.05
CPNE1-202ENST00000352393 IQSEC3Q9UPP2 1182 aaPredicted RBP27.83■■■□□ 2.05
CPNE1-202ENST00000352393 LAMB1P07942 1786 aa27.82■■■□□ 2.04
CPNE1-202ENST00000352393 CNTNAP5Q8WYK1 1306 aa27.82■■■□□ 2.04
CPNE1-202ENST00000352393 CAMTA2O94983 1202 aa27.82■■■□□ 2.04
CPNE1-202ENST00000352393 GYPCP04921 128 aa27.82■■■□□ 2.04
CPNE1-202ENST00000352393 FGRP09769 529 aa27.82■■■□□ 2.04
CPNE1-202ENST00000352393 CALM1P0DP23 149 aa27.82■■■□□ 2.04
CPNE1-202ENST00000352393 CALM2P0DP24 149 aa27.82■■■□□ 2.04
CPNE1-202ENST00000352393 CALM3P0DP25 149 aa27.82■■■□□ 2.04
CPNE1-202ENST00000352393 TXLNAP40222 546 aa27.82■■■□□ 2.04
CPNE1-202ENST00000352393 E2F4Q16254 413 aa27.82■■■□□ 2.04
CPNE1-202ENST00000352393 JAKMIP3Q5VZ66 844 aa27.82■■■□□ 2.04
CPNE1-202ENST00000352393 BRIP1Q9BX63 1249 aa27.82■■■□□ 2.04
CPNE1-202ENST00000352393 ARFGAP3Q9NP61 516 aa27.82■■■□□ 2.04
CPNE1-202ENST00000352393 CCDC87Q9NVE4 849 aa27.82■■■□□ 2.04
CPNE1-202ENST00000352393 A0A0U1RQJ8 604 aa27.82■■■□□ 2.04
CPNE1-202ENST00000352393 ERICH4A6NGS2 130 aa27.82■■■□□ 2.04
CPNE1-202ENST00000352393 DDAH1O94760 285 aa27.82■■■□□ 2.04
CPNE1-202ENST00000352393 ZNF174Q15697 407 aa27.82■■■□□ 2.04
CPNE1-202ENST00000352393 CNGA4Q8IV77 575 aa27.82■■■□□ 2.04
CPNE1-202ENST00000352393 ATRIPQ8WXE1 791 aa27.82■■■□□ 2.04
CPNE1-202ENST00000352393 ABCF2Q9UG63 623 aa27.82■■■□□ 2.04
CPNE1-202ENST00000352393 CASP14P31944 242 aa27.81■■■□□ 2.04
CPNE1-202ENST00000352393 SRGAP1Q7Z6B7 1085 aa27.81■■■□□ 2.04
CPNE1-202ENST00000352393 CPLX3Q8WVH0 158 aa27.81■■■□□ 2.04
CPNE1-202ENST00000352393 CTNND2Q9UQB3 1225 aa27.81■■■□□ 2.04
CPNE1-202ENST00000352393 CASZ1Q86V15 1759 aa27.81■■■□□ 2.04
CPNE1-202ENST00000352393 CYP2D7A0A087X1C5 515 aa27.8■■■□□ 2.04
CPNE1-202ENST00000352393 KIF5CO60282 957 aa27.8■■■□□ 2.04
CPNE1-202ENST00000352393 PCP11498 1178 aaKnown RBP27.8■■■□□ 2.04
CPNE1-202ENST00000352393 FXR1P51114 621 aaKnown RBP eCLIP27.8■■■□□ 2.04
CPNE1-202ENST00000352393 FUT8Q9BYC5 575 aa27.8■■■□□ 2.04
CPNE1-202ENST00000352393 LIMA1Q9UHB6 759 aaKnown RBP27.8■■■□□ 2.04
CPNE1-202ENST00000352393 CCDC151A5D8V7 595 aa27.79■■■□□ 2.04
CPNE1-202ENST00000352393 CHMP4BP1P59074 171 aa27.79■■■□□ 2.04
CPNE1-202ENST00000352393 PTGDRQ13258 359 aa27.79■■■□□ 2.04
CPNE1-202ENST00000352393 IQCA1Q86XH1 822 aa27.79■■■□□ 2.04
CPNE1-202ENST00000352393 CDC23Q9UJX2 597 aa27.79■■■□□ 2.04
CPNE1-202ENST00000352393 OAS2P29728 719 aaKnown RBP27.79■■■□□ 2.04
CPNE1-202ENST00000352393 PDXDC2PQ6P474 469 aa27.79■■■□□ 2.04
CPNE1-202ENST00000352393 DYNLL1P63167 89 aaKnown RBP27.78■■■□□ 2.04
CPNE1-202ENST00000352393 BRD3Q15059 726 aa27.78■■■□□ 2.04
CPNE1-202ENST00000352393 KRT31Q15323 416 aa27.78■■■□□ 2.04
CPNE1-202ENST00000352393 CDC5LQ99459 802 aaKnown RBP27.78■■■□□ 2.04
CPNE1-202ENST00000352393 MYH14Q7Z406 1995 aaKnown RBP27.78■■■□□ 2.04
CPNE1-202ENST00000352393 POLR3GO15318 223 aaPredicted RBP27.77■■■□□ 2.04
CPNE1-202ENST00000352393 CRKLP46109 303 aaKnown RBP27.77■■■□□ 2.04
CPNE1-202ENST00000352393 GYG1P46976 350 aa27.77■■■□□ 2.04
CPNE1-202ENST00000352393 SMC1AQ14683 1233 aaKnown RBP27.77■■■□□ 2.04
CPNE1-202ENST00000352393 IQUBQ8NA54 791 aa27.77■■■□□ 2.04
CPNE1-202ENST00000352393 GNL3LQ9NVN8 582 aaKnown RBP27.77■■■□□ 2.04
CPNE1-202ENST00000352393 LRRC10BA6NIK2 292 aa27.77■■■□□ 2.04
CPNE1-202ENST00000352393 EXOC5O00471 708 aa27.77■■■□□ 2.04
CPNE1-202ENST00000352393 TUBB2AQ13885 445 aa27.77■■■□□ 2.04
CPNE1-202ENST00000352393 CEP112Q8N8E3 955 aa27.77■■■□□ 2.04
CPNE1-202ENST00000352393 TUBB2BQ9BVA1 445 aa27.77■■■□□ 2.04
CPNE1-202ENST00000352393 RWDD2AQ9UIY3 292 aa27.77■■■□□ 2.04
CPNE1-202ENST00000352393 TTF2Q9UNY4 1162 aaKnown RBP27.77■■■□□ 2.04
CPNE1-202ENST00000352393 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.77■■■□□ 2.04
CPNE1-202ENST00000352393 TRAPPC10P48553 1259 aa27.76■■■□□ 2.03
CPNE1-202ENST00000352393 STAMQ92783 540 aa27.76■■■□□ 2.03
CPNE1-202ENST00000352393 PYM1Q9BRP8 204 aaKnown RBP27.76■■■□□ 2.03
CPNE1-202ENST00000352393 GTPBP6O43824 516 aaPredicted RBP27.76■■■□□ 2.03
CPNE1-202ENST00000352393 CCT6AP40227 531 aaKnown RBP27.76■■■□□ 2.03
CPNE1-202ENST00000352393 LONRF2Q1L5Z9 754 aa27.76■■■□□ 2.03
CPNE1-202ENST00000352393 SRBD1Q8N5C6 995 aaKnown RBP27.76■■■□□ 2.03
CPNE1-202ENST00000352393 ZNF384Q8TF68 577 aa27.76■■■□□ 2.03
CPNE1-202ENST00000352393 MTRQ99707 1265 aa27.76■■■□□ 2.03
CPNE1-202ENST00000352393 ANKZF1Q9H8Y5 726 aa27.76■■■□□ 2.03
CPNE1-202ENST00000352393 NIP7Q9Y221 180 aaKnown RBP eCLIP27.76■■■□□ 2.03
CPNE1-202ENST00000352393 ERVK-24P63145 666 aa27.75■■■□□ 2.03
CPNE1-202ENST00000352393 SPAG1Q07617 926 aa27.75■■■□□ 2.03
CPNE1-202ENST00000352393 ZNF569Q5MCW4 686 aa27.75■■■□□ 2.03
CPNE1-202ENST00000352393 CTR9Q6PD62 1173 aa27.75■■■□□ 2.03
CPNE1-202ENST00000352393 TMTC1Q8IUR5 882 aa27.75■■■□□ 2.03
CPNE1-202ENST00000352393 BLZF1Q9H2G9 400 aa27.75■■■□□ 2.03
CPNE1-202ENST00000352393 CALCOCO1Q9P1Z2 691 aa27.75■■■□□ 2.03
CPNE1-202ENST00000352393 RRAGBQ5VZM2 374 aa27.74■■■□□ 2.03
CPNE1-202ENST00000352393 KIAA1551Q9HCM1 1747 aa27.74■■■□□ 2.03
CPNE1-202ENST00000352393 ABHD10Q9NUJ1 306 aa27.74■■■□□ 2.03
CPNE1-202ENST00000352393 TAF1P21675 1872 aa27.74■■■□□ 2.03
CPNE1-202ENST00000352393 COPB1P53618 953 aaKnown RBP27.74■■■□□ 2.03
CPNE1-202ENST00000352393 IL17AQ16552 155 aa27.74■■■□□ 2.03
CPNE1-202ENST00000352393 MSANTD4Q8NCY6 345 aa27.74■■■□□ 2.03
CPNE1-202ENST00000352393 ACRBPQ8NEB7 543 aa27.74■■■□□ 2.03
CPNE1-202ENST00000352393 ZSWIM4Q9H7M6 989 aa27.74■■■□□ 2.03
CPNE1-202ENST00000352393 MAP2K7O14733 419 aa27.73■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms