RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 PLCD1P51178 756 aa14.83□□□□□ -0.04
IFT88-202ENST00000351808 XRCC4Q13426 336 aa14.83□□□□□ -0.04
IFT88-202ENST00000351808 SERTAD1Q9UHV2 236 aa14.83□□□□□ -0.04
IFT88-202ENST00000351808 L3MBTL1Q9Y468 752 aa14.83□□□□□ -0.04
IFT88-202ENST00000351808 ZNF233A6NK53 670 aa14.82□□□□□ -0.04
IFT88-202ENST00000351808 ARID4AP29374 1257 aaPredicted RBP14.82□□□□□ -0.04
IFT88-202ENST00000351808 EPHB4P54760 987 aa14.82□□□□□ -0.04
IFT88-202ENST00000351808 SLC5A9Q2M3M2 681 aa14.82□□□□□ -0.04
IFT88-202ENST00000351808 CUL5Q93034 780 aa14.82□□□□□ -0.04
IFT88-202ENST00000351808 HAUS4Q9H6D7 363 aa14.82□□□□□ -0.04
IFT88-202ENST00000351808 CPS1P31327 1500 aa14.82□□□□□ -0.04
IFT88-202ENST00000351808 POLR2DO15514 142 aaKnown RBP14.82□□□□□ -0.04
IFT88-202ENST00000351808 SMNDC1O75940 238 aaKnown RBP eCLIP14.82□□□□□ -0.04
IFT88-202ENST00000351808 ANP32DO95626 131 aa14.82□□□□□ -0.04
IFT88-202ENST00000351808 SARSP49591 514 aaKnown RBP14.82□□□□□ -0.04
IFT88-202ENST00000351808 ELF3P78545 371 aaPredicted RBP14.82□□□□□ -0.04
IFT88-202ENST00000351808 HIBCHQ6NVY1 386 aaPredicted RBP14.82□□□□□ -0.04
IFT88-202ENST00000351808 EHBP1Q8NDI1 1231 aa14.82□□□□□ -0.04
IFT88-202ENST00000351808 KLHDC4Q8TBB5 520 aa14.82□□□□□ -0.04
IFT88-202ENST00000351808 EBF2Q9HAK2 575 aa14.82□□□□□ -0.04
IFT88-202ENST00000351808 BACH1O14867 736 aa14.81□□□□□ -0.04
IFT88-202ENST00000351808 COBLO75128 1261 aa14.81□□□□□ -0.04
IFT88-202ENST00000351808 QPCTQ16769 361 aa14.81□□□□□ -0.04
IFT88-202ENST00000351808 TTC39AQ5SRH9 613 aa14.81□□□□□ -0.04
IFT88-202ENST00000351808 STK11IPQ8N1F8 1099 aa14.81□□□□□ -0.04
IFT88-202ENST00000351808 CCDC43Q96MW1 224 aaKnown RBP14.81□□□□□ -0.04
IFT88-202ENST00000351808 C15orf41Q9Y2V0 281 aa14.81□□□□□ -0.04
IFT88-202ENST00000351808 CACNA1FO60840 1977 aa14.81□□□□□ -0.04
IFT88-202ENST00000351808 CPLX1O14810 134 aa14.81□□□□□ -0.04
IFT88-202ENST00000351808 HPDP32754 393 aaPredicted RBP14.81□□□□□ -0.04
IFT88-202ENST00000351808 PRPHP41219 470 aa14.81□□□□□ -0.04
IFT88-202ENST00000351808 CFAP58Q5T655 872 aa14.81□□□□□ -0.04
IFT88-202ENST00000351808 SPATA1Q5VX52 437 aa14.81□□□□□ -0.04
IFT88-202ENST00000351808 EMBQ6PCB8 327 aa14.81□□□□□ -0.04
IFT88-202ENST00000351808 VPS37DQ86XT2 251 aa14.81□□□□□ -0.04
IFT88-202ENST00000351808 CHPF2Q9P2E5 772 aa14.81□□□□□ -0.04
IFT88-202ENST00000351808 LAMA4Q16363 1823 aa14.8□□□□□ -0.04
IFT88-202ENST00000351808 ERCC5P28715 1186 aaPredicted RBP14.8□□□□□ -0.04
IFT88-202ENST00000351808 MSL1Q68DK7 614 aa14.8□□□□□ -0.04
IFT88-202ENST00000351808 ANKRD24Q8TF21 1146 aa14.8□□□□□ -0.04
IFT88-202ENST00000351808 CCDC47Q96A33 483 aaKnown RBP14.8□□□□□ -0.04
IFT88-202ENST00000351808 MAP3K14Q99558 947 aa14.8□□□□□ -0.04
IFT88-202ENST00000351808 LEMD3Q9Y2U8 911 aa14.8□□□□□ -0.04
IFT88-202ENST00000351808 IDEP14735 1019 aa14.8□□□□□ -0.04
IFT88-202ENST00000351808 HERVK_113P62684 666 aa14.8□□□□□ -0.04
IFT88-202ENST00000351808 GRIN1Q05586 938 aa14.8□□□□□ -0.04
IFT88-202ENST00000351808 PPP1R7Q15435 360 aa14.8□□□□□ -0.04
IFT88-202ENST00000351808 NT5DC1Q5TFE4 455 aa14.8□□□□□ -0.04
IFT88-202ENST00000351808 MMGT1Q8N4V1 131 aa14.8□□□□□ -0.04
IFT88-202ENST00000351808 ZNF513Q8N8E2 541 aaPredicted RBP14.8□□□□□ -0.04
IFT88-202ENST00000351808 N4BP2Q86UW6 1770 aaPredicted RBP14.8□□□□□ -0.04
IFT88-202ENST00000351808 PYGLP06737 847 aa14.79□□□□□ -0.04
IFT88-202ENST00000351808 CD44P16070 742 aaKnown RBP14.79□□□□□ -0.04
IFT88-202ENST00000351808 IQCEQ6IPM2 695 aa14.79□□□□□ -0.04
IFT88-202ENST00000351808 DDX46Q7L014 1031 aaKnown RBP14.79□□□□□ -0.04
IFT88-202ENST00000351808 IQCKQ8N0W5 287 aa14.79□□□□□ -0.04
IFT88-202ENST00000351808 CTAGE1Q96RT6 745 aa14.79□□□□□ -0.04
IFT88-202ENST00000351808 VPS16Q9H269 839 aa14.79□□□□□ -0.04
IFT88-202ENST00000351808 NCAPD2Q15021 1401 aa14.79□□□□□ -0.04
IFT88-202ENST00000351808 N4BP3O15049 544 aa14.79□□□□□ -0.04
IFT88-202ENST00000351808 PDCD2Q16342 344 aaPredicted RBP14.79□□□□□ -0.04
IFT88-202ENST00000351808 DRAXINQ8NBI3 349 aaPredicted RBP14.79□□□□□ -0.04
IFT88-202ENST00000351808 ACSBG1Q96GR2 724 aa14.79□□□□□ -0.04
IFT88-202ENST00000351808 SEC16BQ96JE7 1060 aa14.79□□□□□ -0.04
IFT88-202ENST00000351808 ZNF570Q96NI8 536 aa14.79□□□□□ -0.04
IFT88-202ENST00000351808 KLF18A0A0U1RQI7 1052 aa14.79□□□□□ -0.04
IFT88-202ENST00000351808 GMNCA6NCL1 334 aa14.79□□□□□ -0.04
IFT88-202ENST00000351808 GOLGA8BA8MQT2 603 aa14.79□□□□□ -0.04
IFT88-202ENST00000351808 UPP2O95045 317 aa14.79□□□□□ -0.04
IFT88-202ENST00000351808 KIF4AO95239 1232 aa14.79□□□□□ -0.04
IFT88-202ENST00000351808 EMC10Q5UCC4 262 aa14.79□□□□□ -0.04
IFT88-202ENST00000351808 SMYD4Q8IYR2 804 aaPredicted RBP14.79□□□□□ -0.04
IFT88-202ENST00000351808 RPUSD2Q8IZ73 545 aaKnown RBP14.79□□□□□ -0.04
IFT88-202ENST00000351808 TRIM58Q8NG06 486 aa14.79□□□□□ -0.04
IFT88-202ENST00000351808 TCP11Q8WWU5 503 aa14.79□□□□□ -0.04
IFT88-202ENST00000351808 HVCN1Q96D96 273 aa14.79□□□□□ -0.04
IFT88-202ENST00000351808 CCDC9Q9Y3X0 531 aaKnown RBP14.79□□□□□ -0.04
IFT88-202ENST00000351808 SYNRGQ9UMZ2 1314 aa14.78□□□□□ -0.04
IFT88-202ENST00000351808 CWF19L2Q2TBE0 894 aaKnown RBP14.78□□□□□ -0.04
IFT88-202ENST00000351808 CDKAL1Q5VV42 579 aa14.78□□□□□ -0.04
IFT88-202ENST00000351808 CAVIN3Q969G5 261 aa14.78□□□□□ -0.04
IFT88-202ENST00000351808 LACRTQ9GZZ8 138 aa14.78□□□□□ -0.04
IFT88-202ENST00000351808 SMARCAL1Q9NZC9 954 aa14.78□□□□□ -0.04
IFT88-202ENST00000351808 CORO1CQ9ULV4 474 aaPredicted RBP14.78□□□□□ -0.04
IFT88-202ENST00000351808 DUSP10Q9Y6W6 482 aa14.78□□□□□ -0.04
IFT88-202ENST00000351808 RIMS1Q86UR5 1692 aaKnown RBP14.78□□□□□ -0.04
IFT88-202ENST00000351808 ITIH6Q6UXX5 1313 aa14.78□□□□□ -0.04
IFT88-202ENST00000351808 FAM153BP0C7A2 387 aa14.78□□□□□ -0.04
IFT88-202ENST00000351808 ITGB3BPQ13352 177 aaPredicted RBP14.78□□□□□ -0.04
IFT88-202ENST00000351808 FAM153CQ494X1 144 aa14.78□□□□□ -0.04
IFT88-202ENST00000351808 SLC30A9Q6PML9 568 aa14.78□□□□□ -0.04
IFT88-202ENST00000351808 CREG2Q8IUH2 290 aa14.78□□□□□ -0.04
IFT88-202ENST00000351808 IL17REQ8NFR9 667 aa14.78□□□□□ -0.04
IFT88-202ENST00000351808 NUP133Q8WUM0 1156 aa14.78□□□□□ -0.04
IFT88-202ENST00000351808 ATP6V1G3Q96LB4 118 aa14.78□□□□□ -0.04
IFT88-202ENST00000351808 FAM153AQ9UHL3 310 aa14.78□□□□□ -0.04
IFT88-202ENST00000351808 HPS5Q9UPZ3 1129 aa14.78□□□□□ -0.04
IFT88-202ENST00000351808 ERICH2A1L162 156 aa14.77□□□□□ -0.04
IFT88-202ENST00000351808 RCCD1A6NED2 376 aa14.77□□□□□ -0.04
IFT88-202ENST00000351808 EIF4E1BA6NMX2 242 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 327.7 ms