RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 HNRNPH1P31943 449 aaKnown RBP21.05■□□□□ 0.96
SCARF1-202ENST00000348987 STX17P56962 302 aa21.05■□□□□ 0.96
SCARF1-202ENST00000348987 RASGRF1Q13972 1273 aa21.05■□□□□ 0.96
SCARF1-202ENST00000348987 TTF1Q15361 905 aaPredicted RBP21.05■□□□□ 0.96
SCARF1-202ENST00000348987 KRI1Q8N9T8 703 aaKnown RBP21.05■□□□□ 0.96
SCARF1-202ENST00000348987 ZNF512BQ96KM6 892 aaPredicted RBP21.05■□□□□ 0.96
SCARF1-202ENST00000348987 FAM107BQ9H098 131 aa21.05■□□□□ 0.96
SCARF1-202ENST00000348987 ZBTB43O43298 467 aa21.05■□□□□ 0.96
SCARF1-202ENST00000348987 PRKAB2O43741 272 aa21.05■□□□□ 0.96
SCARF1-202ENST00000348987 ZMYND10O75800 440 aa21.05■□□□□ 0.96
SCARF1-202ENST00000348987 GUCY1A2P33402 732 aa21.05■□□□□ 0.96
SCARF1-202ENST00000348987 AMPD2Q01433 879 aa21.05■□□□□ 0.96
SCARF1-202ENST00000348987 STIM1Q13586 685 aa21.05■□□□□ 0.96
SCARF1-202ENST00000348987 TMEM67Q5HYA8 995 aa21.05■□□□□ 0.96
SCARF1-202ENST00000348987 NT5DC1Q5TFE4 455 aa21.05■□□□□ 0.96
SCARF1-202ENST00000348987 KLHL10Q6JEL2 608 aa21.05■□□□□ 0.96
SCARF1-202ENST00000348987 MAGEB6Q8N7X4 407 aa21.05■□□□□ 0.96
SCARF1-202ENST00000348987 EHD4Q9H223 541 aa21.05■□□□□ 0.96
SCARF1-202ENST00000348987 ARMT1Q9H993 441 aa21.05■□□□□ 0.96
SCARF1-202ENST00000348987 MBD4O95243 580 aa21.04■□□□□ 0.96
SCARF1-202ENST00000348987 ARID4AP29374 1257 aaPredicted RBP21.04■□□□□ 0.96
SCARF1-202ENST00000348987 ARHGAP25P42331 645 aa21.04■□□□□ 0.96
SCARF1-202ENST00000348987 CCDC82Q8N4S0 544 aa21.04■□□□□ 0.96
SCARF1-202ENST00000348987 ZKSCAN3Q9BRR0 538 aa21.04■□□□□ 0.96
SCARF1-202ENST00000348987 NHSL1Q5SYE7 1610 aa21.04■□□□□ 0.96
SCARF1-202ENST00000348987 MYH7P12883 1935 aa21.04■□□□□ 0.96
SCARF1-202ENST00000348987 GYPCP04921 128 aa21.04■□□□□ 0.96
SCARF1-202ENST00000348987 USP14P54578 494 aa21.04■□□□□ 0.96
SCARF1-202ENST00000348987 CMTR1Q8N1G2 835 aaKnown RBP21.04■□□□□ 0.96
SCARF1-202ENST00000348987 C4AP0C0L4 1744 aa21.03■□□□□ 0.96
SCARF1-202ENST00000348987 C4BP0C0L5 1744 aa21.03■□□□□ 0.96
SCARF1-202ENST00000348987 DDX60Q8IY21 1712 aaKnown RBP21.03■□□□□ 0.96
SCARF1-202ENST00000348987 ATRNO75882 1429 aa21.03■□□□□ 0.96
SCARF1-202ENST00000348987 EBAG9O00559 213 aa21.03■□□□□ 0.96
SCARF1-202ENST00000348987 PDE8AO60658 829 aa21.03■□□□□ 0.96
SCARF1-202ENST00000348987 PBX1P40424 430 aa21.03■□□□□ 0.96
SCARF1-202ENST00000348987 IARSP41252 1262 aaKnown RBP21.03■□□□□ 0.96
SCARF1-202ENST00000348987 PLCD1P51178 756 aa21.03■□□□□ 0.96
SCARF1-202ENST00000348987 ERVK-24P63145 666 aa21.03■□□□□ 0.96
SCARF1-202ENST00000348987 KCNV1Q6PIU1 500 aa21.03■□□□□ 0.96
SCARF1-202ENST00000348987 IFNL3Q8IZI9 196 aa21.03■□□□□ 0.96
SCARF1-202ENST00000348987 ANKRD20A12PQ8NF67 263 aa21.03■□□□□ 0.96
SCARF1-202ENST00000348987 COG1Q8WTW3 980 aa21.03■□□□□ 0.96
SCARF1-202ENST00000348987 GOLGA8AA7E2F4 631 aa21.03■□□□□ 0.96
SCARF1-202ENST00000348987 ENC1O14682 589 aa21.03■□□□□ 0.96
SCARF1-202ENST00000348987 SHOX2O60902 331 aaPredicted RBP21.03■□□□□ 0.96
SCARF1-202ENST00000348987 FGFR2P21802 821 aa21.03■□□□□ 0.96
SCARF1-202ENST00000348987 MAP2K2P36507 400 aa21.03■□□□□ 0.96
SCARF1-202ENST00000348987 IRAK1P51617 712 aa21.03■□□□□ 0.96
SCARF1-202ENST00000348987 DZIP3Q86Y13 1208 aaKnown RBP21.03■□□□□ 0.96
SCARF1-202ENST00000348987 GSPT2Q8IYD1 628 aaKnown RBP21.03■□□□□ 0.96
SCARF1-202ENST00000348987 SPATA5Q8NB90 893 aa21.03■□□□□ 0.96
SCARF1-202ENST00000348987 SLC26A6Q9BXS9 759 aa21.03■□□□□ 0.96
SCARF1-202ENST00000348987 HDAC6Q9UBN7 1215 aa21.03■□□□□ 0.96
SCARF1-202ENST00000348987 ADD3Q9UEY8 706 aaKnown RBP21.03■□□□□ 0.96
SCARF1-202ENST00000348987 PUM3Q15397 648 aaKnown RBP21.02■□□□□ 0.96
SCARF1-202ENST00000348987 RRP12Q5JTH9 1297 aaKnown RBP21.02■□□□□ 0.96
SCARF1-202ENST00000348987 CNGA4Q8IV77 575 aa21.02■□□□□ 0.96
SCARF1-202ENST00000348987 FAM76AQ8TAV0 307 aa21.02■□□□□ 0.96
SCARF1-202ENST00000348987 LPIN2Q92539 896 aa21.02■□□□□ 0.96
SCARF1-202ENST00000348987 SLF1Q9BQI6 1058 aa21.02■□□□□ 0.96
SCARF1-202ENST00000348987 NUTM2BA6NNL0 878 aaPredicted RBP21.01■□□□□ 0.95
SCARF1-202ENST00000348987 NUTM2EB1AL46 878 aaPredicted RBP21.01■□□□□ 0.95
SCARF1-202ENST00000348987 AGPSO00116 658 aa21.01■□□□□ 0.95
SCARF1-202ENST00000348987 IFIT3O14879 490 aaKnown RBP21.01■□□□□ 0.95
SCARF1-202ENST00000348987 CCDC172P0C7W6 258 aa21.01■□□□□ 0.95
SCARF1-202ENST00000348987 MAP9Q49MG5 647 aa21.01■□□□□ 0.95
SCARF1-202ENST00000348987 ELOA2Q8IYF1 753 aaPredicted RBP21.01■□□□□ 0.95
SCARF1-202ENST00000348987 MMS19Q96T76 1030 aa21.01■□□□□ 0.95
SCARF1-202ENST00000348987 NAPBQ9H115 298 aa21.01■□□□□ 0.95
SCARF1-202ENST00000348987 TRIM10Q9UDY6 481 aa21.01■□□□□ 0.95
SCARF1-202ENST00000348987 TMEM87BQ96K49 555 aa21.01■□□□□ 0.95
SCARF1-202ENST00000348987 CRACR2AQ9BSW2 395 aa21.01■□□□□ 0.95
SCARF1-202ENST00000348987 GUCA1BQ9UMX6 200 aa21.01■□□□□ 0.95
SCARF1-202ENST00000348987 KCNJ14Q9UNX9 436 aa21.01■□□□□ 0.95
SCARF1-202ENST00000348987 BTBD18B2RXH4 712 aa21■□□□□ 0.95
SCARF1-202ENST00000348987 SMIM22K7EJ46 135 aa21■□□□□ 0.95
SCARF1-202ENST00000348987 SRGAP2O75044 1071 aa21■□□□□ 0.95
SCARF1-202ENST00000348987 CDKL5O76039 1030 aa21■□□□□ 0.95
SCARF1-202ENST00000348987 ERCC5P28715 1186 aaPredicted RBP21■□□□□ 0.95
SCARF1-202ENST00000348987 CDC25AP30304 524 aa21■□□□□ 0.95
SCARF1-202ENST00000348987 SGMS1Q86VZ5 419 aa21■□□□□ 0.95
SCARF1-202ENST00000348987 BCAS4Q8TDM0 211 aa21■□□□□ 0.95
SCARF1-202ENST00000348987 BCL9O00512 1426 aa21■□□□□ 0.95
SCARF1-202ENST00000348987 SLIT2O94813 1529 aa21■□□□□ 0.95
SCARF1-202ENST00000348987 GOLGA6CA6NDK9 693 aa21■□□□□ 0.95
SCARF1-202ENST00000348987 GSG1L2A8MUP6 293 aa21■□□□□ 0.95
SCARF1-202ENST00000348987 PATL2C9JE40 543 aaKnown RBP21■□□□□ 0.95
SCARF1-202ENST00000348987 RNF225M0QZC1 329 aaPredicted RBP21■□□□□ 0.95
SCARF1-202ENST00000348987 GOLGA6DP0CG33 693 aa21■□□□□ 0.95
SCARF1-202ENST00000348987 MYBL2P10244 700 aa21■□□□□ 0.95
SCARF1-202ENST00000348987 KCNQ4P56696 695 aa21■□□□□ 0.95
SCARF1-202ENST00000348987 SMIM5Q71RC9 77 aa21■□□□□ 0.95
SCARF1-202ENST00000348987 GOLGA6AQ9NYA3 693 aa21■□□□□ 0.95
SCARF1-202ENST00000348987 MYO1AQ9UBC5 1043 aa21■□□□□ 0.95
SCARF1-202ENST00000348987 SLC12A7Q9Y666 1083 aa21■□□□□ 0.95
SCARF1-202ENST00000348987 CD44P16070 742 aaKnown RBP20.99■□□□□ 0.95
SCARF1-202ENST00000348987 BCAMP50895 628 aa20.99■□□□□ 0.95
SCARF1-202ENST00000348987 CPLX2Q6PUV4 134 aaKnown RBP20.99■□□□□ 0.95
SCARF1-202ENST00000348987 TMTC1Q8IUR5 882 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms