RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 C8orf74Q6P047 294 aa17.24■□□□□ 0.35
SRPK1-201ENST00000346162 SRGAP1Q7Z6B7 1085 aa17.24■□□□□ 0.35
SRPK1-201ENST00000346162 CCDC170Q8IYT3 715 aa17.24■□□□□ 0.35
SRPK1-201ENST00000346162 ZNF654Q8IZM8 581 aa17.24■□□□□ 0.35
SRPK1-201ENST00000346162 SPDYE3A6NKU9 549 aa17.24■□□□□ 0.35
SRPK1-201ENST00000346162 CDC25BP30305 580 aa17.24■□□□□ 0.35
SRPK1-201ENST00000346162 PLCD1P51178 756 aa17.24■□□□□ 0.35
SRPK1-201ENST00000346162 CARD10Q9BWT7 1032 aa17.24■□□□□ 0.35
SRPK1-201ENST00000346162 NPHP4O75161 1426 aaPredicted RBP17.24■□□□□ 0.35
SRPK1-201ENST00000346162 CIAO1O76071 339 aa17.24■□□□□ 0.35
SRPK1-201ENST00000346162 RPS8P62241 208 aaKnown RBP17.24■□□□□ 0.35
SRPK1-201ENST00000346162 OGFOD1Q8N543 542 aa17.24■□□□□ 0.35
SRPK1-201ENST00000346162 NUCKS1Q9H1E3 243 aaKnown RBP17.24■□□□□ 0.35
SRPK1-201ENST00000346162 SAAL1Q96ER3 474 aa17.23■□□□□ 0.35
SRPK1-201ENST00000346162 VPS54Q9P1Q0 977 aa17.23■□□□□ 0.35
SRPK1-201ENST00000346162 TPX2Q9ULW0 747 aaKnown RBP17.23■□□□□ 0.35
SRPK1-201ENST00000346162 MACROD2A1Z1Q3 448 aa17.23■□□□□ 0.35
SRPK1-201ENST00000346162 ADKP55263 362 aaKnown RBP17.23■□□□□ 0.35
SRPK1-201ENST00000346162 SEPT6Q14141 434 aa17.23■□□□□ 0.35
SRPK1-201ENST00000346162 PPP4R3AQ6IN85 833 aa17.23■□□□□ 0.35
SRPK1-201ENST00000346162 SELENOOQ9BVL4 669 aa17.23■□□□□ 0.35
SRPK1-201ENST00000346162 PPARAQ07869 468 aa17.23■□□□□ 0.35
SRPK1-201ENST00000346162 POSTNQ15063 836 aa17.23■□□□□ 0.35
SRPK1-201ENST00000346162 DBN1Q16643 649 aa17.23■□□□□ 0.35
SRPK1-201ENST00000346162 FAM98CQ17RN3 349 aaKnown RBP17.23■□□□□ 0.35
SRPK1-201ENST00000346162 DAAM2Q86T65 1068 aa17.23■□□□□ 0.35
SRPK1-201ENST00000346162 CEP63Q96MT8 703 aa17.23■□□□□ 0.35
SRPK1-201ENST00000346162 VPS16Q9H269 839 aa17.23■□□□□ 0.35
SRPK1-201ENST00000346162 MAPK8IP1Q9UQF2 711 aa17.23■□□□□ 0.35
SRPK1-201ENST00000346162 CTIFO43310 598 aaKnown RBP17.23■□□□□ 0.35
SRPK1-201ENST00000346162 PHKA1P46020 1223 aa17.23■□□□□ 0.35
SRPK1-201ENST00000346162 CLEC17AQ6ZS10 378 aa17.23■□□□□ 0.35
SRPK1-201ENST00000346162 CACNA2D3Q8IZS8 1091 aa17.23■□□□□ 0.35
SRPK1-201ENST00000346162 UBLCP1Q8WVY7 318 aaPredicted RBP17.23■□□□□ 0.35
SRPK1-201ENST00000346162 TTC14Q96N46 770 aa17.23■□□□□ 0.35
SRPK1-201ENST00000346162 PHLPP2Q6ZVD8 1323 aa17.22■□□□□ 0.35
SRPK1-201ENST00000346162 PFKFB1P16118 471 aa17.22■□□□□ 0.35
SRPK1-201ENST00000346162 BCAMP50895 628 aa17.22■□□□□ 0.35
SRPK1-201ENST00000346162 CC2D1AQ6P1N0 951 aaPredicted RBP17.22■□□□□ 0.35
SRPK1-201ENST00000346162 FAM169AQ9Y6X4 670 aa17.22■□□□□ 0.35
SRPK1-201ENST00000346162 MED14O60244 1454 aa17.22■□□□□ 0.35
SRPK1-201ENST00000346162 LRRD1A4D1F6 860 aa17.22■□□□□ 0.35
SRPK1-201ENST00000346162 USP17L12C9JPN9 530 aa17.22■□□□□ 0.35
SRPK1-201ENST00000346162 USP17L21D6R901 530 aa17.22■□□□□ 0.35
SRPK1-201ENST00000346162 UBE3CQ15386 1083 aa17.22■□□□□ 0.35
SRPK1-201ENST00000346162 CTNND2Q9UQB3 1225 aa17.22■□□□□ 0.35
SRPK1-201ENST00000346162 GBP1P32455 592 aa17.22■□□□□ 0.35
SRPK1-201ENST00000346162 ARMC2Q8NEN0 867 aa17.22■□□□□ 0.35
SRPK1-201ENST00000346162 CNKSR2Q8WXI2 1034 aa17.22■□□□□ 0.35
SRPK1-201ENST00000346162 TRIM4Q9C037 500 aa17.22■□□□□ 0.35
SRPK1-201ENST00000346162 ANKARQ7Z5J8 1434 aa17.22■□□□□ 0.35
SRPK1-201ENST00000346162 SETBP1Q9Y6X0 1596 aa17.21■□□□□ 0.35
SRPK1-201ENST00000346162 HGSO14964 777 aaPredicted RBP17.21■□□□□ 0.35
SRPK1-201ENST00000346162 ARID5BQ14865 1188 aa17.21■□□□□ 0.35
SRPK1-201ENST00000346162 KIAA0753Q2KHM9 967 aa17.21■□□□□ 0.35
SRPK1-201ENST00000346162 TRIM7Q9C029 511 aa17.21■□□□□ 0.35
SRPK1-201ENST00000346162 PCDHA7Q9UN72 937 aa17.21■□□□□ 0.35
SRPK1-201ENST00000346162 MRPL12P52815 198 aaKnown RBP17.21■□□□□ 0.35
SRPK1-201ENST00000346162 ARID5AQ03989 594 aa17.21■□□□□ 0.35
SRPK1-201ENST00000346162 SETDB1Q15047 1291 aa17.21■□□□□ 0.35
SRPK1-201ENST00000346162 NECTIN1Q15223 517 aa17.21■□□□□ 0.35
SRPK1-201ENST00000346162 MAST3O60307 1309 aa17.21■□□□□ 0.35
SRPK1-201ENST00000346162 GOLGA8KD6RF30 607 aa17.21■□□□□ 0.35
SRPK1-201ENST00000346162 RBM17Q96I25 401 aaKnown RBP17.21■□□□□ 0.35
SRPK1-201ENST00000346162 RPGRIP1Q96KN7 1286 aa17.21■□□□□ 0.35
SRPK1-201ENST00000346162 CDC23Q9UJX2 597 aa17.21■□□□□ 0.35
SRPK1-201ENST00000346162 GYG1P46976 350 aa17.21■□□□□ 0.35
SRPK1-201ENST00000346162 LONRF3Q496Y0 759 aa17.21■□□□□ 0.35
SRPK1-201ENST00000346162 SV2BQ7L1I2 683 aa17.21■□□□□ 0.35
SRPK1-201ENST00000346162 NOSTRINQ8IVI9 506 aa17.21■□□□□ 0.35
SRPK1-201ENST00000346162 FERMT2Q96AC1 680 aa17.21■□□□□ 0.35
SRPK1-201ENST00000346162 GGA1Q9UJY5 639 aa17.21■□□□□ 0.35
SRPK1-201ENST00000346162 WDR17Q8IZU2 1322 aa17.2■□□□□ 0.34
SRPK1-201ENST00000346162 LARGE1O95461 756 aa17.2■□□□□ 0.34
SRPK1-201ENST00000346162 TFAP4Q01664 338 aa17.2■□□□□ 0.34
SRPK1-201ENST00000346162 TBC1D8BQ0IIM8 1120 aa17.2■□□□□ 0.34
SRPK1-201ENST00000346162 TRIM14Q14142 442 aa17.2■□□□□ 0.34
SRPK1-201ENST00000346162 EYA3Q99504 573 aa17.2■□□□□ 0.34
SRPK1-201ENST00000346162 ZBTB1Q9Y2K1 713 aa17.2■□□□□ 0.34
SRPK1-201ENST00000346162 GPCPD1Q9NPB8 672 aa17.2■□□□□ 0.34
SRPK1-201ENST00000346162 HDAC9Q9UKV0 1011 aa17.2■□□□□ 0.34
SRPK1-201ENST00000346162 HIP1RO75146 1068 aa17.2■□□□□ 0.34
SRPK1-201ENST00000346162 CASP8Q14790 479 aa17.2■□□□□ 0.34
SRPK1-201ENST00000346162 RUFY4Q6ZNE9 571 aa17.2■□□□□ 0.34
SRPK1-201ENST00000346162 SEPT14Q6ZU15 432 aa17.2■□□□□ 0.34
SRPK1-201ENST00000346162 CMTR1Q8N1G2 835 aaKnown RBP17.2■□□□□ 0.34
SRPK1-201ENST00000346162 FANCBQ8NB91 859 aa17.2■□□□□ 0.34
SRPK1-201ENST00000346162 ZMYM6O95789 1325 aa17.2■□□□□ 0.34
SRPK1-201ENST00000346162 SYNRGQ9UMZ2 1314 aa17.2■□□□□ 0.34
SRPK1-201ENST00000346162 LRRC7Q96NW7 1537 aa17.2■□□□□ 0.34
SRPK1-201ENST00000346162 PDE4DQ08499 809 aa17.2■□□□□ 0.34
SRPK1-201ENST00000346162 LRRC23Q53EV4 343 aaPredicted RBP17.2■□□□□ 0.34
SRPK1-201ENST00000346162 SDR42E1Q8WUS8 393 aa17.2■□□□□ 0.34
SRPK1-201ENST00000346162 TSGA10Q9BZW7 698 aa17.2■□□□□ 0.34
SRPK1-201ENST00000346162 CMA1P23946 247 aa17.19■□□□□ 0.34
SRPK1-201ENST00000346162 TNNC1P63316 161 aa17.19■□□□□ 0.34
SRPK1-201ENST00000346162 PNOCQ13519 176 aa17.19■□□□□ 0.34
SRPK1-201ENST00000346162 MUM1L1Q5H9M0 696 aa17.19■□□□□ 0.34
SRPK1-201ENST00000346162 FAM47AQ5JRC9 791 aa17.19■□□□□ 0.34
SRPK1-201ENST00000346162 WDR78Q5VTH9 848 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms