RNA–Protein interactions for RNA: ENST00000346042.7

PDE8B-205, Transcript of phosphodiesterase 8B, humanhuman

TSL 1 (best) BASIC

Gene PDE8B, Length 3,276 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8B-205ENST00000346042 KCNB2Q92953 911 aa16.63■□□□□ 0.25
PDE8B-205ENST00000346042 ZNF646O15015 1829 aaPredicted RBP16.62■□□□□ 0.25
PDE8B-205ENST00000346042 TTLL1O95922 423 aa16.62■□□□□ 0.25
PDE8B-205ENST00000346042 IREB2P48200 963 aaKnown RBP16.62■□□□□ 0.25
PDE8B-205ENST00000346042 C2orf69Q8N8R5 385 aa16.62■□□□□ 0.25
PDE8B-205ENST00000346042 ATRNL1Q5VV63 1379 aa16.62■□□□□ 0.25
PDE8B-205ENST00000346042 ZBTB22O15209 634 aa16.62■□□□□ 0.25
PDE8B-205ENST00000346042 ASNSP08243 561 aa16.62■□□□□ 0.25
PDE8B-205ENST00000346042 MAP3K9P80192 1104 aa16.62■□□□□ 0.25
PDE8B-205ENST00000346042 GADL1Q6ZQY3 521 aa16.62■□□□□ 0.25
PDE8B-205ENST00000346042 TMEM179Q6ZVK1 233 aa16.62■□□□□ 0.25
PDE8B-205ENST00000346042 F5H6K3 240 aa16.62■□□□□ 0.25
PDE8B-205ENST00000346042 SLC1A4P43007 532 aa16.62■□□□□ 0.25
PDE8B-205ENST00000346042 KLRC3Q07444 240 aa16.62■□□□□ 0.25
PDE8B-205ENST00000346042 OPTNQ96CV9 577 aa16.62■□□□□ 0.25
PDE8B-205ENST00000346042 TANGO6Q9C0B7 1094 aa16.62■□□□□ 0.25
PDE8B-205ENST00000346042 EHD4Q9H223 541 aa16.62■□□□□ 0.25
PDE8B-205ENST00000346042 KANSL2Q9H9L4 492 aa16.62■□□□□ 0.25
PDE8B-205ENST00000346042 K7ELQ4 463 aaPredicted RBP16.61■□□□□ 0.25
PDE8B-205ENST00000346042 PTPRAP18433 802 aa16.61■□□□□ 0.25
PDE8B-205ENST00000346042 ZNF157P51786 506 aaPredicted RBP16.61■□□□□ 0.25
PDE8B-205ENST00000346042 SEC23AQ15436 765 aa16.61■□□□□ 0.25
PDE8B-205ENST00000346042 FAM83BQ5T0W9 1011 aa16.61■□□□□ 0.25
PDE8B-205ENST00000346042 TMED8Q6PL24 325 aaPredicted RBP16.61■□□□□ 0.25
PDE8B-205ENST00000346042 CHAMP1Q96JM3 812 aa16.61■□□□□ 0.25
PDE8B-205ENST00000346042 TM6SF1Q9BZW5 370 aa16.61■□□□□ 0.25
PDE8B-205ENST00000346042 SSC5DA1L4H1 1573 aa16.61■□□□□ 0.25
PDE8B-205ENST00000346042 ARMC9Q7Z3E5 817 aa16.61■□□□□ 0.25
PDE8B-205ENST00000346042 KIFC2Q96AC6 838 aa16.61■□□□□ 0.25
PDE8B-205ENST00000346042 ZIC5Q96T25 663 aa16.61■□□□□ 0.25
PDE8B-205ENST00000346042 ZMYM6O95789 1325 aa16.61■□□□□ 0.25
PDE8B-205ENST00000346042 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.6■□□□□ 0.25
PDE8B-205ENST00000346042 MKI67P46013 3256 aaKnown RBP16.6■□□□□ 0.25
PDE8B-205ENST00000346042 PSME4Q14997 1843 aa16.6■□□□□ 0.25
PDE8B-205ENST00000346042 SLFN13Q68D06 897 aa16.6■□□□□ 0.25
PDE8B-205ENST00000346042 CPXCR1Q8N123 301 aa16.6■□□□□ 0.25
PDE8B-205ENST00000346042 TOMM70O94826 608 aa16.6■□□□□ 0.25
PDE8B-205ENST00000346042 CYP4F22Q6NT55 531 aa16.6■□□□□ 0.25
PDE8B-205ENST00000346042 SCYL3Q8IZE3 742 aa16.6■□□□□ 0.25
PDE8B-205ENST00000346042 CCDC17Q96LX7 622 aa16.6■□□□□ 0.25
PDE8B-205ENST00000346042 SLC26A6Q9BXS9 759 aa16.6■□□□□ 0.25
PDE8B-205ENST00000346042 SNCAIPQ9Y6H5 919 aa16.6■□□□□ 0.25
PDE8B-205ENST00000346042 MAST2Q6P0Q8 1798 aa16.59■□□□□ 0.25
PDE8B-205ENST00000346042 TMEM232C9JQI7 657 aa16.59■□□□□ 0.25
PDE8B-205ENST00000346042 CTNND1O60716 968 aaKnown RBP16.59■□□□□ 0.25
PDE8B-205ENST00000346042 NDUFB10O96000 172 aa16.59■□□□□ 0.25
PDE8B-205ENST00000346042 ST3GAL1Q11201 340 aa16.59■□□□□ 0.25
PDE8B-205ENST00000346042 TMEM87BQ96K49 555 aa16.59■□□□□ 0.25
PDE8B-205ENST00000346042 PITPNM2Q9BZ72 1349 aa16.59■□□□□ 0.25
PDE8B-205ENST00000346042 BECN1Q14457 450 aa16.59■□□□□ 0.25
PDE8B-205ENST00000346042 CTCFLQ8NI51 663 aaPredicted RBP16.59■□□□□ 0.25
PDE8B-205ENST00000346042 HPS5Q9UPZ3 1129 aa16.59■□□□□ 0.25
PDE8B-205ENST00000346042 NAV1Q8NEY1 1877 aa16.59■□□□□ 0.25
PDE8B-205ENST00000346042 CDK5RAP2Q96SN8 1893 aa16.59■□□□□ 0.25
PDE8B-205ENST00000346042 PKP1Q13835 747 aa16.58■□□□□ 0.25
PDE8B-205ENST00000346042 RTN1Q16799 776 aa16.58■□□□□ 0.25
PDE8B-205ENST00000346042 ANKRD13AQ8IZ07 590 aa16.58■□□□□ 0.25
PDE8B-205ENST00000346042 FANCBQ8NB91 859 aa16.58■□□□□ 0.25
PDE8B-205ENST00000346042 HOMER2Q9NSB8 354 aa16.58■□□□□ 0.25
PDE8B-205ENST00000346042 NPM3O75607 178 aaKnown RBP16.58■□□□□ 0.24
PDE8B-205ENST00000346042 FGRP09769 529 aa16.58■□□□□ 0.24
PDE8B-205ENST00000346042 V9GY48 417 aaPredicted RBP16.58■□□□□ 0.24
PDE8B-205ENST00000346042 ARHGEF10LQ9HCE6 1279 aa16.58■□□□□ 0.24
PDE8B-205ENST00000346042 KLRF2D3W0D1 207 aa16.57■□□□□ 0.24
PDE8B-205ENST00000346042 TROAPQ12815 778 aa16.57■□□□□ 0.24
PDE8B-205ENST00000346042 USH1GQ495M9 461 aa16.57■□□□□ 0.24
PDE8B-205ENST00000346042 CCDC174Q6PII3 467 aa16.57■□□□□ 0.24
PDE8B-205ENST00000346042 FERMT3Q86UX7 667 aa16.57■□□□□ 0.24
PDE8B-205ENST00000346042 SMC1BQ8NDV3 1235 aa16.57■□□□□ 0.24
PDE8B-205ENST00000346042 GPKOWQ92917 476 aaPredicted RBP eCLIP16.57■□□□□ 0.24
PDE8B-205ENST00000346042 USP17L10C9JJH3 530 aa16.57■□□□□ 0.24
PDE8B-205ENST00000346042 TOP1P11387 765 aaKnown RBP16.57■□□□□ 0.24
PDE8B-205ENST00000346042 PLS1Q14651 629 aa16.57■□□□□ 0.24
PDE8B-205ENST00000346042 ZNF280CQ8ND82 737 aa16.57■□□□□ 0.24
PDE8B-205ENST00000346042 DDX60LQ5H9U9 1706 aaKnown RBP16.57■□□□□ 0.24
PDE8B-205ENST00000346042 GJA5P36382 358 aa16.57■□□□□ 0.24
PDE8B-205ENST00000346042 IGSF3O75054 1194 aa16.56■□□□□ 0.24
PDE8B-205ENST00000346042 FLOT1O75955 427 aa16.56■□□□□ 0.24
PDE8B-205ENST00000346042 TREML2Q5T2D2 321 aa16.56■□□□□ 0.24
PDE8B-205ENST00000346042 WDR78Q5VTH9 848 aa16.56■□□□□ 0.24
PDE8B-205ENST00000346042 WNK4Q96J92 1243 aa16.56■□□□□ 0.24
PDE8B-205ENST00000346042 ROBO3Q96MS0 1386 aa16.56■□□□□ 0.24
PDE8B-205ENST00000346042 VPS37CA5D8V6 355 aaPredicted RBP16.56■□□□□ 0.24
PDE8B-205ENST00000346042 PARP1P09874 1014 aaKnown RBP16.56■□□□□ 0.24
PDE8B-205ENST00000346042 PDHBP11177 359 aa16.56■□□□□ 0.24
PDE8B-205ENST00000346042 ANKRD1Q15327 319 aa16.55■□□□□ 0.24
PDE8B-205ENST00000346042 DGKHQ86XP1 1220 aa16.55■□□□□ 0.24
PDE8B-205ENST00000346042 SRBD1Q8N5C6 995 aaKnown RBP16.55■□□□□ 0.24
PDE8B-205ENST00000346042 UIMC1Q96RL1 719 aa16.55■□□□□ 0.24
PDE8B-205ENST00000346042 PAGR1Q9BTK6 254 aa16.55■□□□□ 0.24
PDE8B-205ENST00000346042 SMC3Q9UQE7 1217 aa16.55■□□□□ 0.24
PDE8B-205ENST00000346042 EPB41L2O43491 1005 aaKnown RBP16.55■□□□□ 0.24
PDE8B-205ENST00000346042 TBC1D12O60347 775 aa16.55■□□□□ 0.24
PDE8B-205ENST00000346042 CYP2C8P10632 490 aa16.55■□□□□ 0.24
PDE8B-205ENST00000346042 MCTP1Q6DN14 999 aa16.55■□□□□ 0.24
PDE8B-205ENST00000346042 FAM217BQ9NTX9 383 aaPredicted RBP16.55■□□□□ 0.24
PDE8B-205ENST00000346042 PPP2R3BQ9Y5P8 575 aa16.55■□□□□ 0.24
PDE8B-205ENST00000346042 GJB2P29033 226 aa16.55■□□□□ 0.24
PDE8B-205ENST00000346042 MMP14P50281 582 aa16.55■□□□□ 0.24
PDE8B-205ENST00000346042 SAPCD2Q86UD0 394 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms