RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 POLR3EQ9NVU0 708 aa15.09■□□□□ 0.01
CASC4-202ENST00000345795 TMEM260Q9NX78 707 aa15.09■□□□□ 0.01
CASC4-202ENST00000345795 FGFR2P21802 821 aa15.08■□□□□ 0.01
CASC4-202ENST00000345795 GSTO1P78417 241 aa15.08■□□□□ 0.01
CASC4-202ENST00000345795 NELFCDQ8IXH7 590 aa15.08■□□□□ 0.01
CASC4-202ENST00000345795 RRP36Q96EU6 259 aaKnown RBP15.08■□□□□ 0.01
CASC4-202ENST00000345795 DEF6Q9H4E7 631 aa15.08■□□□□ 0.01
CASC4-202ENST00000345795 ZNF287Q9HBT7 754 aa15.08■□□□□ 0.01
CASC4-202ENST00000345795 XRN1Q8IZH2 1706 aaKnown RBP15.08■□□□□ 0.01
CASC4-202ENST00000345795 CUTAO60888 179 aa15.08■□□□□ 0
CASC4-202ENST00000345795 HLA-DOAP06340 250 aa15.08■□□□□ 0
CASC4-202ENST00000345795 GRAPQ13588 217 aa15.08■□□□□ 0
CASC4-202ENST00000345795 GRAPLQ8TC17 118 aaPredicted RBP15.08■□□□□ 0
CASC4-202ENST00000345795 KANSL2Q9H9L4 492 aa15.08■□□□□ 0
CASC4-202ENST00000345795 C21orf2O43822 256 aa15.08■□□□□ 0
CASC4-202ENST00000345795 CCDC12Q8WUD4 166 aaPredicted RBP15.08■□□□□ 0
CASC4-202ENST00000345795 GDAQ9Y2T3 454 aa15.08■□□□□ 0
CASC4-202ENST00000345795 XDHP47989 1333 aa15.08■□□□□ 0
CASC4-202ENST00000345795 USP17L5A8MUK1 530 aa15.07■□□□□ 0
CASC4-202ENST00000345795 CBFA2T2O43439 604 aa15.07■□□□□ 0
CASC4-202ENST00000345795 KIF4BQ2VIQ3 1234 aa15.07■□□□□ 0
CASC4-202ENST00000345795 LRRC8AQ8IWT6 810 aa15.07■□□□□ 0
CASC4-202ENST00000345795 KCNB2Q92953 911 aa15.07■□□□□ 0
CASC4-202ENST00000345795 CEP95Q96GE4 821 aa15.07■□□□□ 0
CASC4-202ENST00000345795 TRPC5Q9UL62 973 aaPredicted RBP15.07■□□□□ 0
CASC4-202ENST00000345795 TCRBV5S4A2TA0A5A2 114 aa15.07■□□□□ 0
CASC4-202ENST00000345795 ERICH4A6NGS2 130 aa15.07■□□□□ 0
CASC4-202ENST00000345795 LRRC41Q15345 812 aa15.07■□□□□ 0
CASC4-202ENST00000345795 TXNRD1Q16881 649 aa15.07■□□□□ 0
CASC4-202ENST00000345795 CLEC4GQ6UXB4 293 aa15.07■□□□□ 0
CASC4-202ENST00000345795 SLC30A10Q6XR72 485 aa15.07■□□□□ 0
CASC4-202ENST00000345795 BCL2L12Q9HB09 334 aa15.07■□□□□ 0
CASC4-202ENST00000345795 DACH1Q9UI36 760 aa15.07■□□□□ 0
CASC4-202ENST00000345795 POLR3GO15318 223 aaPredicted RBP15.07■□□□□ 0
CASC4-202ENST00000345795 FAM193AP78312 1265 aa15.07■□□□□ 0
CASC4-202ENST00000345795 UBXN1Q04323 297 aa15.07■□□□□ 0
CASC4-202ENST00000345795 CCDC174Q6PII3 467 aa15.07■□□□□ 0
CASC4-202ENST00000345795 ZNF771Q7L3S4 317 aaPredicted RBP15.07■□□□□ 0
CASC4-202ENST00000345795 BLIDQ8IZY5 108 aa15.07■□□□□ 0
CASC4-202ENST00000345795 CAGE1Q8TC20 777 aa15.07■□□□□ 0
CASC4-202ENST00000345795 STAG1Q8WVM7 1258 aa15.07■□□□□ 0
CASC4-202ENST00000345795 GJA3Q9Y6H8 435 aa15.07■□□□□ 0
CASC4-202ENST00000345795 TNS2Q63HR2 1409 aa15.06■□□□□ 0
CASC4-202ENST00000345795 WNT7AO00755 349 aa15.06■□□□□ 0
CASC4-202ENST00000345795 TRIM21P19474 475 aaKnown RBP15.06■□□□□ 0
CASC4-202ENST00000345795 LIFRP42702 1097 aa15.06■□□□□ 0
CASC4-202ENST00000345795 SLC1A4P43007 532 aa15.06■□□□□ 0
CASC4-202ENST00000345795 CYP4A11Q02928 519 aa15.06■□□□□ 0
CASC4-202ENST00000345795 C2CD5Q86YS7 1000 aa15.06■□□□□ 0
CASC4-202ENST00000345795 IQUBQ8NA54 791 aa15.06■□□□□ 0
CASC4-202ENST00000345795 EPC1Q9H2F5 836 aa15.06■□□□□ 0
CASC4-202ENST00000345795 SEPT11Q9NVA2 429 aaKnown RBP15.06■□□□□ 0
CASC4-202ENST00000345795 TRIM49BA6NDI0 452 aa15.06■□□□□ 0
CASC4-202ENST00000345795 PPEF1O14829 653 aaPredicted RBP15.06■□□□□ 0
CASC4-202ENST00000345795 TTBK2Q6IQ55 1244 aa15.06■□□□□ 0
CASC4-202ENST00000345795 PPIP5K2O43314 1243 aa15.06■□□□□ 0
CASC4-202ENST00000345795 CDK8P49336 464 aa15.06■□□□□ 0
CASC4-202ENST00000345795 STIM1Q13586 685 aa15.06■□□□□ 0
CASC4-202ENST00000345795 TMEM47Q9BQJ4 181 aa15.06■□□□□ 0
CASC4-202ENST00000345795 SLC39A2Q9NP94 309 aa15.06■□□□□ 0
CASC4-202ENST00000345795 ZHX1Q9UKY1 873 aaPredicted RBP15.06■□□□□ 0
CASC4-202ENST00000345795 SAMM50Q9Y512 469 aa15.06■□□□□ 0
CASC4-202ENST00000345795 MYO1BO43795 1136 aa15.05■□□□□ 0
CASC4-202ENST00000345795 EN1Q05925 392 aaPredicted RBP15.05■□□□□ 0
CASC4-202ENST00000345795 IGSF22Q8N9C0 903 aa15.05■□□□□ 0
CASC4-202ENST00000345795 KIAA1524Q8TCG1 905 aa15.05■□□□□ 0
CASC4-202ENST00000345795 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.05■□□□□ 0
CASC4-202ENST00000345795 FAM217BQ9NTX9 383 aaPredicted RBP15.05■□□□□ 0
CASC4-202ENST00000345795 TMOD2Q9NZR1 351 aa15.05■□□□□ 0
CASC4-202ENST00000345795 ARPP21Q9UBL0 812 aaPredicted RBP15.05■□□□□ 0
CASC4-202ENST00000345795 ATF5Q9Y2D1 282 aaPredicted RBP15.05■□□□□ 0
CASC4-202ENST00000345795 THRAP3Q9Y2W1 955 aaKnown RBP15.05■□□□□ 0
CASC4-202ENST00000345795 RIC1Q4ADV7 1423 aa15.05■□□□□ 0
CASC4-202ENST00000345795 ELF2Q15723 593 aa15.05■□□□□ -0
CASC4-202ENST00000345795 TDRD12Q587J7 1177 aaKnown RBP15.05■□□□□ -0
CASC4-202ENST00000345795 METTL16Q86W50 562 aaKnown RBP15.05■□□□□ -0
CASC4-202ENST00000345795 UBXN4Q92575 508 aa15.05■□□□□ -0
CASC4-202ENST00000345795 CAPZA3Q96KX2 299 aa15.05■□□□□ -0
CASC4-202ENST00000345795 TDRD3Q9H7E2 651 aaKnown RBP15.05■□□□□ -0
CASC4-202ENST00000345795 GUCA1BQ9UMX6 200 aa15.05■□□□□ -0
CASC4-202ENST00000345795 ZBTB12Q9Y330 459 aaPredicted RBP15.05■□□□□ -0
CASC4-202ENST00000345795 WDR78Q5VTH9 848 aa15.05■□□□□ -0
CASC4-202ENST00000345795 MAN1B1Q9UKM7 699 aa15.05■□□□□ -0
CASC4-202ENST00000345795 IBSPP21815 317 aaPredicted RBP15.04■□□□□ -0
CASC4-202ENST00000345795 PDE4DQ08499 809 aa15.04■□□□□ -0
CASC4-202ENST00000345795 DHX40Q8IX18 779 aaKnown RBP15.04■□□□□ -0
CASC4-202ENST00000345795 TDRD7Q8NHU6 1098 aaKnown RBP15.04■□□□□ -0
CASC4-202ENST00000345795 GDAP1L1Q96MZ0 367 aa15.04■□□□□ -0
CASC4-202ENST00000345795 TRERF1Q96PN7 1200 aa15.04■□□□□ -0
CASC4-202ENST00000345795 CRACR2AQ9BSW2 395 aa15.04■□□□□ -0
CASC4-202ENST00000345795 EXOC1Q9NV70 894 aa15.04■□□□□ -0
CASC4-202ENST00000345795 CFBP00751 764 aa15.04■□□□□ -0
CASC4-202ENST00000345795 RNASE9P60153 205 aaKnown RBP15.04■□□□□ -0
CASC4-202ENST00000345795 SHROOM1Q2M3G4 852 aaPredicted RBP15.04■□□□□ -0
CASC4-202ENST00000345795 KIAA1328Q86T90 577 aa15.04■□□□□ -0
CASC4-202ENST00000345795 ZNF215Q9UL58 517 aaPredicted RBP15.04■□□□□ -0
CASC4-202ENST00000345795 CUL4BQ13620 913 aa15.04■□□□□ -0
CASC4-202ENST00000345795 LARGE2Q8N3Y3 721 aa15.04■□□□□ -0
CASC4-202ENST00000345795 RIOK1Q9BRS2 568 aaKnown RBP15.04■□□□□ -0
CASC4-202ENST00000345795 IRX2Q9BZI1 471 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms