RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 MCTP2Q6DN12 878 aa21.27■■□□□ 1
HDAC4-201ENST00000345617 TTC16Q8NEE8 873 aa21.27■■□□□ 1
HDAC4-201ENST00000345617 ANKRD2Q9GZV1 360 aa21.27■■□□□ 1
HDAC4-201ENST00000345617 ANGPTL3Q9Y5C1 460 aa21.27■■□□□ 1
HDAC4-201ENST00000345617 C2CD5Q86YS7 1000 aa21.27■■□□□ 1
HDAC4-201ENST00000345617 GDAP1L1Q96MZ0 367 aa21.27■■□□□ 1
HDAC4-201ENST00000345617 SPC25Q9HBM1 224 aa21.27■■□□□ 1
HDAC4-201ENST00000345617 LIG3P49916 1009 aa21.27■■□□□ 1
HDAC4-201ENST00000345617 MAGEB6Q8N7X4 407 aa21.27■□□□□ 0.99
HDAC4-201ENST00000345617 MAP3K7O43318 606 aa21.27■□□□□ 0.99
HDAC4-201ENST00000345617 LONRF2Q1L5Z9 754 aa21.27■□□□□ 0.99
HDAC4-201ENST00000345617 KLHL7Q8IXQ5 586 aa21.26■□□□□ 0.99
HDAC4-201ENST00000345617 LINS1Q8NG48 757 aa21.26■□□□□ 0.99
HDAC4-201ENST00000345617 MAPKBP1O60336 1514 aa21.26■□□□□ 0.99
HDAC4-201ENST00000345617 MMEL1Q495T6 779 aa21.26■□□□□ 0.99
HDAC4-201ENST00000345617 CYB5RLQ6IPT4 315 aa21.26■□□□□ 0.99
HDAC4-201ENST00000345617 KIF24Q5T7B8 1368 aa21.26■□□□□ 0.99
HDAC4-201ENST00000345617 ALS2CLQ60I27 953 aa21.26■□□□□ 0.99
HDAC4-201ENST00000345617 CTAGE3PQ8IX95 158 aa21.26■□□□□ 0.99
HDAC4-201ENST00000345617 MGARPQ8TDB4 240 aa21.26■□□□□ 0.99
HDAC4-201ENST00000345617 ZBTB40Q9NUA8 1239 aa21.26■□□□□ 0.99
HDAC4-201ENST00000345617 RNF14Q9UBS8 474 aa21.26■□□□□ 0.99
HDAC4-201ENST00000345617 CALCRLQ16602 461 aa21.26■□□□□ 0.99
HDAC4-201ENST00000345617 ARHGEF18Q6ZSZ5 1173 aa21.26■□□□□ 0.99
HDAC4-201ENST00000345617 ST13P4Q8IZP2 240 aaPredicted RBP21.26■□□□□ 0.99
HDAC4-201ENST00000345617 CDKL2Q92772 493 aa21.26■□□□□ 0.99
HDAC4-201ENST00000345617 PHF23Q9BUL5 403 aaPredicted RBP21.26■□□□□ 0.99
HDAC4-201ENST00000345617 ASPHQ12797 758 aa21.26■□□□□ 0.99
HDAC4-201ENST00000345617 MCM9Q9NXL9 1143 aa21.26■□□□□ 0.99
HDAC4-201ENST00000345617 SLC17A8Q8NDX2 589 aa21.26■□□□□ 0.99
HDAC4-201ENST00000345617 CSRNP1Q96S65 589 aa21.26■□□□□ 0.99
HDAC4-201ENST00000345617 FAM135BQ49AJ0 1406 aa21.25■□□□□ 0.99
HDAC4-201ENST00000345617 CCDC151A5D8V7 595 aa21.25■□□□□ 0.99
HDAC4-201ENST00000345617 STAT1P42224 750 aa21.25■□□□□ 0.99
HDAC4-201ENST00000345617 MX2P20592 715 aa21.25■□□□□ 0.99
HDAC4-201ENST00000345617 GARSP41250 739 aaKnown RBP21.25■□□□□ 0.99
HDAC4-201ENST00000345617 RBM6P78332 1123 aaKnown RBP21.25■□□□□ 0.99
HDAC4-201ENST00000345617 KRT25Q7Z3Z0 450 aa21.25■□□□□ 0.99
HDAC4-201ENST00000345617 FAM212AQ96EL1 285 aa21.25■□□□□ 0.99
HDAC4-201ENST00000345617 TTI1O43156 1089 aa21.25■□□□□ 0.99
HDAC4-201ENST00000345617 MRPL44Q9H9J2 332 aaKnown RBP21.25■□□□□ 0.99
HDAC4-201ENST00000345617 POTEB3A0JP26 581 aa21.25■□□□□ 0.99
HDAC4-201ENST00000345617 BAG2O95816 211 aa21.25■□□□□ 0.99
HDAC4-201ENST00000345617 POTEBQ6S5H4 581 aa21.25■□□□□ 0.99
HDAC4-201ENST00000345617 SERPINI1Q99574 410 aa21.25■□□□□ 0.99
HDAC4-201ENST00000345617 MAP3K5Q99683 1374 aa21.25■□□□□ 0.99
HDAC4-201ENST00000345617 C10orf76Q5T2E6 689 aa21.25■□□□□ 0.99
HDAC4-201ENST00000345617 TRMT1LQ7Z2T5 733 aaKnown RBP21.25■□□□□ 0.99
HDAC4-201ENST00000345617 KDM5BQ9UGL1 1544 aa21.25■□□□□ 0.99
HDAC4-201ENST00000345617 JADE1Q6IE81 842 aa21.25■□□□□ 0.99
HDAC4-201ENST00000345617 PDE6BP35913 854 aa21.24■□□□□ 0.99
HDAC4-201ENST00000345617 POLR1AO95602 1720 aaPredicted RBP21.24■□□□□ 0.99
HDAC4-201ENST00000345617 PRAG1Q86YV5 1406 aa21.24■□□□□ 0.99
HDAC4-201ENST00000345617 DNMT1P26358 1616 aaKnown RBP21.24■□□□□ 0.99
HDAC4-201ENST00000345617 KCNJ18B7U540 433 aa21.24■□□□□ 0.99
HDAC4-201ENST00000345617 EIF3BP55884 814 aaKnown RBP21.24■□□□□ 0.99
HDAC4-201ENST00000345617 ETF1P62495 437 aaKnown RBP21.24■□□□□ 0.99
HDAC4-201ENST00000345617 KCNJ12Q14500 433 aa21.24■□□□□ 0.99
HDAC4-201ENST00000345617 PDE11AQ9HCR9 933 aa21.24■□□□□ 0.99
HDAC4-201ENST00000345617 ATP5HO75947 161 aa21.24■□□□□ 0.99
HDAC4-201ENST00000345617 TCEANC2Q96MN5 208 aa21.24■□□□□ 0.99
HDAC4-201ENST00000345617 ZBTB3Q9H5J0 574 aa21.24■□□□□ 0.99
HDAC4-201ENST00000345617 ADCY8P40145 1251 aa21.24■□□□□ 0.99
HDAC4-201ENST00000345617 TTC38Q5R3I4 469 aa21.24■□□□□ 0.99
HDAC4-201ENST00000345617 NBPF10Q6P3W6 841 aaKnown RBP21.24■□□□□ 0.99
HDAC4-201ENST00000345617 RNF34Q969K3 372 aa21.24■□□□□ 0.99
HDAC4-201ENST00000345617 MRPL46Q9H2W6 279 aaKnown RBP21.24■□□□□ 0.99
HDAC4-201ENST00000345617 KIAA1468Q9P260 1216 aa21.24■□□□□ 0.99
HDAC4-201ENST00000345617 NME8Q8N427 588 aa21.24■□□□□ 0.99
HDAC4-201ENST00000345617 ABCA5Q8WWZ7 1642 aa21.24■□□□□ 0.99
HDAC4-201ENST00000345617 ADALQ6DHV7 355 aa21.24■□□□□ 0.99
HDAC4-201ENST00000345617 N4BP2L2Q92802 583 aaPredicted RBP21.23■□□□□ 0.99
HDAC4-201ENST00000345617 POLE3Q9NRF9 147 aa21.23■□□□□ 0.99
HDAC4-201ENST00000345617 PPP2R2CQ9Y2T4 447 aa21.23■□□□□ 0.99
HDAC4-201ENST00000345617 SOS2Q07890 1332 aaPredicted RBP21.23■□□□□ 0.99
HDAC4-201ENST00000345617 EMILIN1Q9Y6C2 1016 aa21.23■□□□□ 0.99
HDAC4-201ENST00000345617 SKAP1Q86WV1 359 aa21.23■□□□□ 0.99
HDAC4-201ENST00000345617 YY1AP1Q9H869 796 aa21.23■□□□□ 0.99
HDAC4-201ENST00000345617 DNM3Q9UQ16 869 aa21.23■□□□□ 0.99
HDAC4-201ENST00000345617 JRKLQ9Y4A0 524 aa21.23■□□□□ 0.99
HDAC4-201ENST00000345617 NOS1P29475 1434 aa21.23■□□□□ 0.99
HDAC4-201ENST00000345617 UGGT2Q9NYU1 1516 aa21.23■□□□□ 0.99
HDAC4-201ENST00000345617 DYNC1I2Q13409 638 aaKnown RBP21.23■□□□□ 0.99
HDAC4-201ENST00000345617 TRIM15Q9C019 465 aa21.23■□□□□ 0.99
HDAC4-201ENST00000345617 RIMS2Q9UQ26 1411 aa21.23■□□□□ 0.99
HDAC4-201ENST00000345617 H0YCG3 227 aa21.23■□□□□ 0.99
HDAC4-201ENST00000345617 SRRM1Q8IYB3 904 aaKnown RBP21.23■□□□□ 0.99
HDAC4-201ENST00000345617 SCYL3Q8IZE3 742 aa21.23■□□□□ 0.99
HDAC4-201ENST00000345617 FAM81BQ96LP2 452 aa21.23■□□□□ 0.99
HDAC4-201ENST00000345617 KAT6AQ92794 2004 aa21.23■□□□□ 0.99
HDAC4-201ENST00000345617 BACH1O14867 736 aa21.23■□□□□ 0.99
HDAC4-201ENST00000345617 RNASE9P60153 205 aaKnown RBP21.23■□□□□ 0.99
HDAC4-201ENST00000345617 TYW1BQ6NUM6 668 aa21.23■□□□□ 0.99
HDAC4-201ENST00000345617 SEPT8Q92599 483 aa21.23■□□□□ 0.99
HDAC4-201ENST00000345617 ATP6V1E1P36543 226 aa21.22■□□□□ 0.99
HDAC4-201ENST00000345617 GUCY2FP51841 1108 aa21.22■□□□□ 0.99
HDAC4-201ENST00000345617 DIXDC1Q155Q3 683 aa21.22■□□□□ 0.99
HDAC4-201ENST00000345617 PPWD1Q96BP3 646 aaKnown RBP21.22■□□□□ 0.99
HDAC4-201ENST00000345617 BABAM1Q9NWV8 329 aa21.22■□□□□ 0.99
HDAC4-201ENST00000345617 GSTA1P08263 222 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms