RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 SMCR8Q8TEV9 937 aaPredicted RBP24.55■■□□□ 1.52
SMARCB1-202ENST00000344921 CFHR5Q9BXR6 569 aa24.55■■□□□ 1.52
SMARCB1-202ENST00000344921 E7EWF7 191 aa24.55■■□□□ 1.52
SMARCB1-202ENST00000344921 SLC27A2O14975 620 aa24.55■■□□□ 1.52
SMARCB1-202ENST00000344921 NT5C2P49902 561 aa24.55■■□□□ 1.52
SMARCB1-202ENST00000344921 NECTIN1Q15223 517 aa24.55■■□□□ 1.52
SMARCB1-202ENST00000344921 CREB3L3Q68CJ9 461 aa24.55■■□□□ 1.52
SMARCB1-202ENST00000344921 IQCA1Q86XH1 822 aa24.55■■□□□ 1.52
SMARCB1-202ENST00000344921 ZKSCAN3Q9BRR0 538 aa24.55■■□□□ 1.52
SMARCB1-202ENST00000344921 MYH4Q9Y623 1939 aa24.55■■□□□ 1.52
SMARCB1-202ENST00000344921 LRRC47Q8N1G4 583 aaKnown RBP24.54■■□□□ 1.52
SMARCB1-202ENST00000344921 LPAR1Q92633 364 aa24.54■■□□□ 1.52
SMARCB1-202ENST00000344921 ZSWIM5Q9P217 1185 aa24.54■■□□□ 1.52
SMARCB1-202ENST00000344921 TAF6LQ9Y6J9 622 aa24.54■■□□□ 1.52
SMARCB1-202ENST00000344921 TLR2O60603 784 aa24.53■■□□□ 1.52
SMARCB1-202ENST00000344921 HOXA7P31268 230 aaPredicted RBP24.53■■□□□ 1.52
SMARCB1-202ENST00000344921 NCOA7Q8NI08 942 aa24.53■■□□□ 1.52
SMARCB1-202ENST00000344921 NKX2-3Q8TAU0 364 aa24.53■■□□□ 1.52
SMARCB1-202ENST00000344921 ASCC2Q9H1I8 757 aaPredicted RBP24.53■■□□□ 1.52
SMARCB1-202ENST00000344921 RPAP3Q9H6T3 665 aaPredicted RBP24.53■■□□□ 1.52
SMARCB1-202ENST00000344921 TCP11L1Q9NUJ3 509 aa24.53■■□□□ 1.52
SMARCB1-202ENST00000344921 USP17L15C9J2P7 530 aa24.52■■□□□ 1.52
SMARCB1-202ENST00000344921 USP17L13C9JLJ4 530 aa24.52■■□□□ 1.52
SMARCB1-202ENST00000344921 USP17L11C9JVI0 530 aa24.52■■□□□ 1.52
SMARCB1-202ENST00000344921 USP17L18D6R9N7 530 aa24.52■■□□□ 1.52
SMARCB1-202ENST00000344921 USP17L22D6RA61 530 aa24.52■■□□□ 1.52
SMARCB1-202ENST00000344921 USP17L17D6RBQ6 530 aa24.52■■□□□ 1.52
SMARCB1-202ENST00000344921 USP17L19D6RCP7 530 aa24.52■■□□□ 1.52
SMARCB1-202ENST00000344921 USP17L20D6RJB6 530 aa24.52■■□□□ 1.52
SMARCB1-202ENST00000344921 GPR25O00155 361 aa24.52■■□□□ 1.52
SMARCB1-202ENST00000344921 USP17L24Q0WX57 530 aa24.52■■□□□ 1.52
SMARCB1-202ENST00000344921 MKL1Q969V6 931 aa24.52■■□□□ 1.52
SMARCB1-202ENST00000344921 TANGO6Q9C0B7 1094 aa24.52■■□□□ 1.52
SMARCB1-202ENST00000344921 F5H6K3 240 aa24.52■■□□□ 1.52
SMARCB1-202ENST00000344921 KLRC3Q07444 240 aa24.52■■□□□ 1.52
SMARCB1-202ENST00000344921 KIAA1755Q5JYT7 1200 aa24.52■■□□□ 1.52
SMARCB1-202ENST00000344921 UBAC1Q9BSL1 405 aa24.51■■□□□ 1.51
SMARCB1-202ENST00000344921 CPA4Q9UI42 421 aa24.51■■□□□ 1.51
SMARCB1-202ENST00000344921 ZKSCAN1P17029 563 aaPredicted RBP24.5■■□□□ 1.51
SMARCB1-202ENST00000344921 CCDC178Q5BJE1 867 aa24.5■■□□□ 1.51
SMARCB1-202ENST00000344921 STOX1Q6ZVD7 989 aa24.5■■□□□ 1.51
SMARCB1-202ENST00000344921 MTMR7Q9Y216 660 aa24.5■■□□□ 1.51
SMARCB1-202ENST00000344921 WDR46O15213 610 aaKnown RBP24.49■■□□□ 1.51
SMARCB1-202ENST00000344921 CATSPERGQ6ZRH7 1159 aa24.49■■□□□ 1.51
SMARCB1-202ENST00000344921 ZNF296Q8WUU4 475 aaPredicted RBP24.49■■□□□ 1.51
SMARCB1-202ENST00000344921 TTC14Q96N46 770 aa24.49■■□□□ 1.51
SMARCB1-202ENST00000344921 ZSCAN10Q96SZ4 725 aaPredicted RBP24.49■■□□□ 1.51
SMARCB1-202ENST00000344921 P2RX7Q99572 595 aaKnown RBP24.49■■□□□ 1.51
SMARCB1-202ENST00000344921 ISY1Q9ULR0 285 aaKnown RBP24.49■■□□□ 1.51
SMARCB1-202ENST00000344921 SYNPO2Q9UMS6 1093 aa24.49■■□□□ 1.51
SMARCB1-202ENST00000344921 SAMD1Q6SPF0 538 aaPredicted RBP24.49■■□□□ 1.51
SMARCB1-202ENST00000344921 CHMP4CQ96CF2 233 aa24.49■■□□□ 1.51
SMARCB1-202ENST00000344921 FKTNO75072 461 aa24.48■■□□□ 1.51
SMARCB1-202ENST00000344921 NDUFB10O96000 172 aa24.48■■□□□ 1.51
SMARCB1-202ENST00000344921 TOP1P11387 765 aaKnown RBP24.48■■□□□ 1.51
SMARCB1-202ENST00000344921 SLFN13Q68D06 897 aa24.48■■□□□ 1.51
SMARCB1-202ENST00000344921 CYB5R4Q7L1T6 521 aa24.48■■□□□ 1.51
SMARCB1-202ENST00000344921 TNKSO95271 1327 aa24.47■■□□□ 1.51
SMARCB1-202ENST00000344921 HERVK_113P62684 666 aa24.47■■□□□ 1.51
SMARCB1-202ENST00000344921 SP3Q02447 781 aa24.47■■□□□ 1.51
SMARCB1-202ENST00000344921 NOM1Q5C9Z4 860 aaKnown RBP24.47■■□□□ 1.51
SMARCB1-202ENST00000344921 FAM83BQ5T0W9 1011 aa24.47■■□□□ 1.51
SMARCB1-202ENST00000344921 GMCL1P1Q8NEA9 526 aa24.47■■□□□ 1.51
SMARCB1-202ENST00000344921 NUP88Q99567 741 aaPredicted RBP24.47■■□□□ 1.51
SMARCB1-202ENST00000344921 TMEM47Q9BQJ4 181 aa24.47■■□□□ 1.51
SMARCB1-202ENST00000344921 ERICH2A1L162 156 aa24.47■■□□□ 1.51
SMARCB1-202ENST00000344921 FLOT1O75955 427 aa24.47■■□□□ 1.51
SMARCB1-202ENST00000344921 GCLCP48506 637 aaPredicted RBP24.47■■□□□ 1.51
SMARCB1-202ENST00000344921 NOVP48745 357 aa24.47■■□□□ 1.51
SMARCB1-202ENST00000344921 C17orf99Q6UX52 265 aa24.47■■□□□ 1.51
SMARCB1-202ENST00000344921 CHST3Q7LGC8 479 aa24.47■■□□□ 1.51
SMARCB1-202ENST00000344921 DGKHQ86XP1 1220 aa24.47■■□□□ 1.51
SMARCB1-202ENST00000344921 ANKRD13CQ8N6S4 541 aa24.47■■□□□ 1.51
SMARCB1-202ENST00000344921 PRDM10Q9NQV6 1147 aa24.47■■□□□ 1.51
SMARCB1-202ENST00000344921 CASP8AP2Q9UKL3 1982 aa24.46■■□□□ 1.51
SMARCB1-202ENST00000344921 COG2Q14746 738 aa24.46■■□□□ 1.51
SMARCB1-202ENST00000344921 SART3Q15020 963 aaKnown RBP24.46■■□□□ 1.51
SMARCB1-202ENST00000344921 RCSD1Q6JBY9 416 aa24.46■■□□□ 1.51
SMARCB1-202ENST00000344921 ADGRA2Q96PE1 1338 aa24.45■■□□□ 1.5
SMARCB1-202ENST00000344921 EIF5BO60841 1220 aaKnown RBP24.45■■□□□ 1.5
SMARCB1-202ENST00000344921 MCCP23508 829 aa24.45■■□□□ 1.5
SMARCB1-202ENST00000344921 HSPA4P34932 840 aa24.45■■□□□ 1.5
SMARCB1-202ENST00000344921 SLC1A4P43007 532 aa24.45■■□□□ 1.5
SMARCB1-202ENST00000344921 RASEFQ8IZ41 740 aa24.45■■□□□ 1.5
SMARCB1-202ENST00000344921 ENAHQ8N8S7 591 aaPredicted RBP24.45■■□□□ 1.5
SMARCB1-202ENST00000344921 KAT14Q9H8E8 782 aa24.45■■□□□ 1.5
SMARCB1-202ENST00000344921 HOXC10Q9NYD6 342 aa24.45■■□□□ 1.5
SMARCB1-202ENST00000344921 IFIT3O14879 490 aaKnown RBP24.44■■□□□ 1.5
SMARCB1-202ENST00000344921 EPB41L2O43491 1005 aaKnown RBP24.44■■□□□ 1.5
SMARCB1-202ENST00000344921 ECM2O94769 699 aaPredicted RBP24.44■■□□□ 1.5
SMARCB1-202ENST00000344921 KRT32Q14532 448 aa24.44■■□□□ 1.5
SMARCB1-202ENST00000344921 IFIT1BQ5T764 474 aaKnown RBP24.44■■□□□ 1.5
SMARCB1-202ENST00000344921 PAGR1Q9BTK6 254 aa24.44■■□□□ 1.5
SMARCB1-202ENST00000344921 USP26Q9BXU7 913 aa24.44■■□□□ 1.5
SMARCB1-202ENST00000344921 BMP3P12645 472 aa24.44■■□□□ 1.5
SMARCB1-202ENST00000344921 MCM5P33992 734 aa24.44■■□□□ 1.5
SMARCB1-202ENST00000344921 KIF22Q14807 665 aa24.44■■□□□ 1.5
SMARCB1-202ENST00000344921 MB21D2Q8IYB1 491 aaPredicted RBP24.44■■□□□ 1.5
SMARCB1-202ENST00000344921 GTF3C2Q8WUA4 911 aaPredicted RBP24.44■■□□□ 1.5
SMARCB1-202ENST00000344921 NEK1Q96PY6 1258 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms