RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 NBPF3Q9H094 633 aa15.91■□□□□ 0.14
HERPUD1-202ENST00000344114 ALDH8A1Q9H2A2 487 aaPredicted RBP15.91■□□□□ 0.14
HERPUD1-202ENST00000344114 PDRG1Q9NUG6 133 aa15.91■□□□□ 0.14
HERPUD1-202ENST00000344114 CTNNA3Q9UI47 895 aa15.91■□□□□ 0.14
HERPUD1-202ENST00000344114 SIPA1L1O43166 1804 aa15.91■□□□□ 0.14
HERPUD1-202ENST00000344114 ZNF532Q9HCE3 1301 aa15.91■□□□□ 0.14
HERPUD1-202ENST00000344114 GPR75-ASB3A0A0A6YYF3 556 aa15.9■□□□□ 0.14
HERPUD1-202ENST00000344114 TCRBV5S4A2TA0A5A2 114 aa15.9■□□□□ 0.14
HERPUD1-202ENST00000344114 GPAA1O43292 621 aa15.9■□□□□ 0.14
HERPUD1-202ENST00000344114 TRIM32Q13049 653 aa15.9■□□□□ 0.14
HERPUD1-202ENST00000344114 ANKRD1Q15327 319 aa15.9■□□□□ 0.14
HERPUD1-202ENST00000344114 SH3D19Q5HYK7 790 aa15.9■□□□□ 0.14
HERPUD1-202ENST00000344114 SPTY2D1Q68D10 685 aaPredicted RBP15.9■□□□□ 0.14
HERPUD1-202ENST00000344114 ZNF280CQ8ND82 737 aa15.9■□□□□ 0.14
HERPUD1-202ENST00000344114 ZNF384Q8TF68 577 aa15.9■□□□□ 0.14
HERPUD1-202ENST00000344114 ZSCAN31Q96LW9 406 aaPredicted RBP15.9■□□□□ 0.14
HERPUD1-202ENST00000344114 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.9■□□□□ 0.144e-7■□□□□ 11
HERPUD1-202ENST00000344114 HMX1Q9NP08 348 aaPredicted RBP15.9■□□□□ 0.14
HERPUD1-202ENST00000344114 ABCF2Q9UG63 623 aa15.9■□□□□ 0.14
HERPUD1-202ENST00000344114 OGDHLQ9ULD0 1010 aa15.9■□□□□ 0.14
HERPUD1-202ENST00000344114 ZMYND8Q9ULU4 1186 aaPredicted RBP15.9■□□□□ 0.14
HERPUD1-202ENST00000344114 LIMCH1Q9UPQ0 1083 aa15.9■□□□□ 0.14
HERPUD1-202ENST00000344114 MYH6P13533 1939 aa15.9■□□□□ 0.14
HERPUD1-202ENST00000344114 ZMYM6O95789 1325 aa15.9■□□□□ 0.14
HERPUD1-202ENST00000344114 CYP21A2P08686 494 aa15.89■□□□□ 0.13
HERPUD1-202ENST00000344114 HMGB1P09429 215 aaKnown RBP15.89■□□□□ 0.13
HERPUD1-202ENST00000344114 RPS6KB1P23443 525 aa15.89■□□□□ 0.13
HERPUD1-202ENST00000344114 SPP2Q13103 211 aa15.89■□□□□ 0.13
HERPUD1-202ENST00000344114 PABPC4Q13310 644 aaKnown RBP eCLIP15.89■□□□□ 0.132e-12■■■■■ 31.3
HERPUD1-202ENST00000344114 DEFB123Q8N688 67 aa15.89■□□□□ 0.13
HERPUD1-202ENST00000344114 PUS7LQ9H0K6 701 aaKnown RBP15.89■□□□□ 0.13
HERPUD1-202ENST00000344114 ASCC2Q9H1I8 757 aaPredicted RBP15.89■□□□□ 0.13
HERPUD1-202ENST00000344114 C11orf49Q9H6J7 331 aa15.89■□□□□ 0.13
HERPUD1-202ENST00000344114 SH2B1Q9NRF2 756 aaPredicted RBP15.89■□□□□ 0.13
HERPUD1-202ENST00000344114 FOXD4L1Q9NU39 408 aa15.89■□□□□ 0.13
HERPUD1-202ENST00000344114 MORF4L1Q9UBU8 362 aa15.89■□□□□ 0.13
HERPUD1-202ENST00000344114 MYH8P13535 1937 aa15.89■□□□□ 0.13
HERPUD1-202ENST00000344114 FRMPD3Q5JV73 1810 aa15.88■□□□□ 0.13
HERPUD1-202ENST00000344114 FAM196BA6NMK8 535 aa15.88■□□□□ 0.13
HERPUD1-202ENST00000344114 IGSF3O75054 1194 aa15.88■□□□□ 0.13
HERPUD1-202ENST00000344114 MAGEA10P43363 369 aaPredicted RBP15.88■□□□□ 0.13
HERPUD1-202ENST00000344114 HMGCS2P54868 508 aa15.88■□□□□ 0.13
HERPUD1-202ENST00000344114 NUCB2P80303 420 aa15.88■□□□□ 0.13
HERPUD1-202ENST00000344114 MECOMQ03112 1051 aa15.88■□□□□ 0.13
HERPUD1-202ENST00000344114 RAB3GAP1Q15042 981 aa15.88■□□□□ 0.13
HERPUD1-202ENST00000344114 MAP3K21Q5TCX8 1036 aa15.88■□□□□ 0.13
HERPUD1-202ENST00000344114 TMED8Q6PL24 325 aaPredicted RBP15.88■□□□□ 0.13
HERPUD1-202ENST00000344114 TDHQ8IZJ6 230 aa15.88■□□□□ 0.13
HERPUD1-202ENST00000344114 TRIB2Q92519 343 aa15.88■□□□□ 0.13
HERPUD1-202ENST00000344114 STXBP5LQ9Y2K9 1186 aa15.88■□□□□ 0.13
HERPUD1-202ENST00000344114 MYH1P12882 1939 aa15.88■□□□□ 0.13
HERPUD1-202ENST00000344114 SYN1P17600 705 aa15.87■□□□□ 0.13
HERPUD1-202ENST00000344114 CAP2P40123 477 aa15.87■□□□□ 0.13
HERPUD1-202ENST00000344114 RRP1BQ14684 758 aaKnown RBP15.87■□□□□ 0.13
HERPUD1-202ENST00000344114 IMMTQ16891 758 aaKnown RBP15.87■□□□□ 0.13
HERPUD1-202ENST00000344114 NOL8Q76FK4 1167 aaKnown RBP15.87■□□□□ 0.13
HERPUD1-202ENST00000344114 Q7L0L9 218 aa15.87■□□□□ 0.13
HERPUD1-202ENST00000344114 MAGEB6Q8N7X4 407 aa15.87■□□□□ 0.13
HERPUD1-202ENST00000344114 NEK1Q96PY6 1258 aa15.87■□□□□ 0.13
HERPUD1-202ENST00000344114 PFASO15067 1338 aa15.87■□□□□ 0.13
HERPUD1-202ENST00000344114 USP17L5A8MUK1 530 aa15.87■□□□□ 0.13
HERPUD1-202ENST00000344114 FOXP2O15409 715 aa15.87■□□□□ 0.13
HERPUD1-202ENST00000344114 CPA1P15085 419 aa15.87■□□□□ 0.13
HERPUD1-202ENST00000344114 MTMR10Q9NXD2 777 aa15.87■□□□□ 0.13
HERPUD1-202ENST00000344114 LRP2BPQ9P2M1 347 aa15.87■□□□□ 0.13
HERPUD1-202ENST00000344114 GNAT2P19087 354 aa15.86■□□□□ 0.13
HERPUD1-202ENST00000344114 NSUN4Q96CB9 384 aaKnown RBP15.86■□□□□ 0.13
HERPUD1-202ENST00000344114 AS3MTQ9HBK9 375 aa15.86■□□□□ 0.13
HERPUD1-202ENST00000344114 TAF6LQ9Y6J9 622 aa15.86■□□□□ 0.13
HERPUD1-202ENST00000344114 COL6A1P12109 1028 aa15.85■□□□□ 0.13
HERPUD1-202ENST00000344114 XRCC5P13010 732 aaKnown RBP15.85■□□□□ 0.13
HERPUD1-202ENST00000344114 HOXA7P31268 230 aaPredicted RBP15.85■□□□□ 0.13
HERPUD1-202ENST00000344114 ALX1Q15699 326 aa15.85■□□□□ 0.13
HERPUD1-202ENST00000344114 HERC5Q9UII4 1024 aaKnown RBP15.85■□□□□ 0.13
HERPUD1-202ENST00000344114 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.85■□□□□ 0.13
HERPUD1-202ENST00000344114 E7EWF7 191 aa15.84■□□□□ 0.13
HERPUD1-202ENST00000344114 MBD4O95243 580 aa15.84■□□□□ 0.13
HERPUD1-202ENST00000344114 FGAP02671 866 aa15.84■□□□□ 0.13
HERPUD1-202ENST00000344114 LDHCP07864 332 aa15.84■□□□□ 0.13
HERPUD1-202ENST00000344114 PRKAR2AP13861 404 aaKnown RBP15.84■□□□□ 0.13
HERPUD1-202ENST00000344114 CYP2B6P20813 491 aa15.84■□□□□ 0.13
HERPUD1-202ENST00000344114 GSTO1P78417 241 aa15.84■□□□□ 0.13
HERPUD1-202ENST00000344114 STOX1Q6ZVD7 989 aa15.84■□□□□ 0.13
HERPUD1-202ENST00000344114 SOCS4Q8WXH5 440 aa15.84■□□□□ 0.13
HERPUD1-202ENST00000344114 GBP4Q96PP9 640 aa15.84■□□□□ 0.13
HERPUD1-202ENST00000344114 STRBPQ96SI9 672 aaKnown RBP15.84■□□□□ 0.13
HERPUD1-202ENST00000344114 NUDT12Q9BQG2 462 aa15.84■□□□□ 0.13
HERPUD1-202ENST00000344114 WDR18Q9BV38 432 aa15.84■□□□□ 0.13
HERPUD1-202ENST00000344114 A0A0C4DFX4 3053 aa15.83■□□□□ 0.13
HERPUD1-202ENST00000344114 BACE1P56817 501 aa15.83■□□□□ 0.12
HERPUD1-202ENST00000344114 TOB2Q14106 344 aaPredicted RBP15.83■□□□□ 0.12
HERPUD1-202ENST00000344114 DHX32Q7L7V1 743 aaKnown RBP15.83■□□□□ 0.12
HERPUD1-202ENST00000344114 TRMT44Q8IYL2 757 aaKnown RBP15.83■□□□□ 0.12
HERPUD1-202ENST00000344114 USP6NLQ92738 828 aa15.83■□□□□ 0.12
HERPUD1-202ENST00000344114 TNPO1Q92973 898 aaKnown RBP15.83■□□□□ 0.12
HERPUD1-202ENST00000344114 UBE2OQ9C0C9 1292 aaKnown RBP15.83■□□□□ 0.12
HERPUD1-202ENST00000344114 TXNRD2Q9NNW7 524 aa15.83■□□□□ 0.12
HERPUD1-202ENST00000344114 RAI14Q9P0K7 980 aa15.83■□□□□ 0.12
HERPUD1-202ENST00000344114 CUL9Q8IWT3 2517 aa15.82■□□□□ 0.12
HERPUD1-202ENST00000344114 WDR19Q8NEZ3 1342 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms