RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 DCPSQ96C86 337 aaKnown RBP11.32□□□□□ -0.6
CLDN18-202ENST00000343735 RBM28Q9NW13 759 aaKnown RBP11.32□□□□□ -0.6
CLDN18-202ENST00000343735 SHTN1A0MZ66 631 aa11.32□□□□□ -0.6
CLDN18-202ENST00000343735 SHMT1P34896 483 aa11.32□□□□□ -0.6
CLDN18-202ENST00000343735 PNMA8AQ86V59 439 aaPredicted RBP11.32□□□□□ -0.6
CLDN18-202ENST00000343735 H3BQV1 296 aa11.32□□□□□ -0.6
CLDN18-202ENST00000343735 MSNP26038 577 aaKnown RBP11.32□□□□□ -0.6
CLDN18-202ENST00000343735 KIF5BP33176 963 aa11.32□□□□□ -0.6
CLDN18-202ENST00000343735 IFFO2Q5TF58 517 aa11.32□□□□□ -0.6
CLDN18-202ENST00000343735 TMEM179Q6ZVK1 233 aa11.32□□□□□ -0.6
CLDN18-202ENST00000343735 SLC44A5Q8NCS7 719 aa11.32□□□□□ -0.6
CLDN18-202ENST00000343735 USP25Q9UHP3 1055 aa11.32□□□□□ -0.6
CLDN18-202ENST00000343735 GOLGA8AA7E2F4 631 aa11.31□□□□□ -0.6
CLDN18-202ENST00000343735 SMIM22K7EJ46 135 aa11.31□□□□□ -0.6
CLDN18-202ENST00000343735 TOP1P11387 765 aaKnown RBP11.31□□□□□ -0.6
CLDN18-202ENST00000343735 MAP3K10Q02779 954 aa11.31□□□□□ -0.6
CLDN18-202ENST00000343735 SUPT20HL1Q3ZLR7 823 aa11.31□□□□□ -0.6
CLDN18-202ENST00000343735 ANGEL2Q5VTE6 544 aaKnown RBP11.31□□□□□ -0.6
CLDN18-202ENST00000343735 CDC37L1Q7L3B6 337 aa11.31□□□□□ -0.6
CLDN18-202ENST00000343735 ZNF654Q8IZM8 581 aa11.31□□□□□ -0.6
CLDN18-202ENST00000343735 DEFB129Q9H1M3 183 aa11.31□□□□□ -0.6
CLDN18-202ENST00000343735 KANSL2Q9H9L4 492 aa11.31□□□□□ -0.6
CLDN18-202ENST00000343735 NID2Q14112 1375 aa11.31□□□□□ -0.6
CLDN18-202ENST00000343735 MPHOSPH10O00566 681 aaKnown RBP11.31□□□□□ -0.6
CLDN18-202ENST00000343735 GNAQP50148 359 aa11.31□□□□□ -0.6
CLDN18-202ENST00000343735 MYL10Q9BUA6 226 aa11.31□□□□□ -0.6
CLDN18-202ENST00000343735 TMEM39BQ9GZU3 492 aa11.31□□□□□ -0.6
CLDN18-202ENST00000343735 SYNPO2Q9UMS6 1093 aa11.31□□□□□ -0.6
CLDN18-202ENST00000343735 TTLL1O95922 423 aa11.31□□□□□ -0.6
CLDN18-202ENST00000343735 EVX2Q03828 476 aa11.31□□□□□ -0.6
CLDN18-202ENST00000343735 SCRN1Q12765 414 aa11.31□□□□□ -0.6
CLDN18-202ENST00000343735 ABCB5Q2M3G0 1257 aa11.31□□□□□ -0.6
CLDN18-202ENST00000343735 CTCFLQ8NI51 663 aaPredicted RBP11.31□□□□□ -0.6
CLDN18-202ENST00000343735 TRPM4Q8TD43 1214 aa11.31□□□□□ -0.6
CLDN18-202ENST00000343735 STX8Q9UNK0 236 aa11.31□□□□□ -0.6
CLDN18-202ENST00000343735 STX6O43752 255 aa11.3□□□□□ -0.6
CLDN18-202ENST00000343735 EPHX2P34913 555 aa11.3□□□□□ -0.6
CLDN18-202ENST00000343735 NOVP48745 357 aa11.3□□□□□ -0.6
CLDN18-202ENST00000343735 RTN1Q16799 776 aa11.3□□□□□ -0.6
CLDN18-202ENST00000343735 FAM184AQ8NB25 1140 aa11.3□□□□□ -0.6
CLDN18-202ENST00000343735 FANCBQ8NB91 859 aa11.3□□□□□ -0.6
CLDN18-202ENST00000343735 MTMR4Q9NYA4 1195 aa11.3□□□□□ -0.6
CLDN18-202ENST00000343735 UQCRHLA0A096LP55 91 aa11.3□□□□□ -0.6
CLDN18-202ENST00000343735 EGFRP00533 1210 aa11.3□□□□□ -0.6
CLDN18-202ENST00000343735 UQCRHP07919 91 aa11.3□□□□□ -0.6
CLDN18-202ENST00000343735 SULF1Q8IWU6 871 aa11.3□□□□□ -0.6
CLDN18-202ENST00000343735 CMTR1Q8N1G2 835 aaKnown RBP11.3□□□□□ -0.6
CLDN18-202ENST00000343735 RGS22Q8NE09 1264 aa11.3□□□□□ -0.6
CLDN18-202ENST00000343735 BICD2Q8TD16 824 aa11.3□□□□□ -0.6
CLDN18-202ENST00000343735 IL17RBQ9NRM6 502 aa11.3□□□□□ -0.6
CLDN18-202ENST00000343735 GGA3Q9NZ52 723 aa11.3□□□□□ -0.6
CLDN18-202ENST00000343735 AKR1B1P15121 316 aa11.29□□□□□ -0.6
CLDN18-202ENST00000343735 MICU3Q86XE3 530 aa11.29□□□□□ -0.6
CLDN18-202ENST00000343735 WASF1Q92558 559 aa11.29□□□□□ -0.6
CLDN18-202ENST00000343735 ZBTB9Q96C00 473 aa11.29□□□□□ -0.6
CLDN18-202ENST00000343735 LZTS2Q9BRK4 669 aa11.29□□□□□ -0.6
CLDN18-202ENST00000343735 NYAP2Q9P242 653 aa11.29□□□□□ -0.6
CLDN18-202ENST00000343735 PGAP2Q9UHJ9 254 aa11.29□□□□□ -0.6
CLDN18-202ENST00000343735 IGKV6D-41A0A0C4DH26 115 aa11.29□□□□□ -0.6
CLDN18-202ENST00000343735 PNMA1Q8ND90 353 aa11.29□□□□□ -0.6
CLDN18-202ENST00000343735 NUP133Q8WUM0 1156 aa11.29□□□□□ -0.6
CLDN18-202ENST00000343735 HPS5Q9UPZ3 1129 aa11.29□□□□□ -0.6
CLDN18-202ENST00000343735 RCSD1Q6JBY9 416 aa11.29□□□□□ -0.6
CLDN18-202ENST00000343735 TRIM22Q8IYM9 498 aa11.29□□□□□ -0.6
CLDN18-202ENST00000343735 CEP95Q96GE4 821 aa11.29□□□□□ -0.6
CLDN18-202ENST00000343735 ZNF341Q9BYN7 854 aa11.29□□□□□ -0.6
CLDN18-202ENST00000343735 DNAJC18Q9H819 358 aa11.29□□□□□ -0.6
CLDN18-202ENST00000343735 hCG_1642624A0A1W2PR95 340 aa11.28□□□□□ -0.6
CLDN18-202ENST00000343735 DDIT3P35638 169 aa11.28□□□□□ -0.6
CLDN18-202ENST00000343735 HIRAP54198 1017 aaPredicted RBP11.28□□□□□ -0.6
CLDN18-202ENST00000343735 PTPN21Q16825 1174 aa11.28□□□□□ -0.6
CLDN18-202ENST00000343735 SMARCC2Q8TAQ2 1214 aa11.28□□□□□ -0.6
CLDN18-202ENST00000343735 NKX2-3Q8TAU0 364 aa11.28□□□□□ -0.6
CLDN18-202ENST00000343735 TEPSINQ96N21 525 aa11.28□□□□□ -0.6
CLDN18-202ENST00000343735 TMEM47Q9BQJ4 181 aa11.28□□□□□ -0.6
CLDN18-202ENST00000343735 SH2D4AQ9H788 454 aa11.28□□□□□ -0.6
CLDN18-202ENST00000343735 NMT2O60551 498 aa11.28□□□□□ -0.6
CLDN18-202ENST00000343735 ASNSP08243 561 aa11.28□□□□□ -0.6
CLDN18-202ENST00000343735 NF2P35240 595 aa11.28□□□□□ -0.6
CLDN18-202ENST00000343735 AKAP17AQ02040 695 aaKnown RBP11.28□□□□□ -0.6
CLDN18-202ENST00000343735 ZSCAN30Q86W11 494 aa11.28□□□□□ -0.6
CLDN18-202ENST00000343735 SCN4AP35499 1836 aa11.28□□□□□ -0.6
CLDN18-202ENST00000343735 TROAPQ12815 778 aa11.28□□□□□ -0.6
CLDN18-202ENST00000343735 HSP90AA4PQ58FG1 418 aa11.28□□□□□ -0.6
CLDN18-202ENST00000343735 MKL1Q969V6 931 aa11.28□□□□□ -0.6
CLDN18-202ENST00000343735 ARHGEF10LQ9HCE6 1279 aa11.28□□□□□ -0.6
CLDN18-202ENST00000343735 CTNND1O60716 968 aaKnown RBP11.27□□□□□ -0.6
CLDN18-202ENST00000343735 IFNAR1P17181 557 aa11.27□□□□□ -0.6
CLDN18-202ENST00000343735 CAP2P40123 477 aa11.27□□□□□ -0.6
CLDN18-202ENST00000343735 SSRP1Q08945 709 aaKnown RBP11.27□□□□□ -0.6
CLDN18-202ENST00000343735 DRC7Q8IY82 874 aa11.27□□□□□ -0.6
CLDN18-202ENST00000343735 NSUN7Q8NE18 718 aaKnown RBP11.27□□□□□ -0.6
CLDN18-202ENST00000343735 TAF1DQ9H5J8 278 aaPredicted RBP11.27□□□□□ -0.6
CLDN18-202ENST00000343735 SENP2Q9HC62 589 aa11.27□□□□□ -0.6
CLDN18-202ENST00000343735 CLIP2Q9UDT6 1046 aa11.27□□□□□ -0.6
CLDN18-202ENST00000343735 WDR33Q9C0J8 1336 aaKnown RBP11.27□□□□□ -0.61
CLDN18-202ENST00000343735 STK36Q9NRP7 1315 aa11.27□□□□□ -0.61
CLDN18-202ENST00000343735 PTPDC1A2A3K4 754 aa11.27□□□□□ -0.61
CLDN18-202ENST00000343735 OFD1O75665 1012 aa11.27□□□□□ -0.61
CLDN18-202ENST00000343735 SMARCA1P28370 1054 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms