RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 RUFY4Q6ZNE9 571 aa13.95□□□□□ -0.18
SSX2IP-201ENST00000342203 MGARPQ8TDB4 240 aa13.95□□□□□ -0.18
SSX2IP-201ENST00000342203 EPB41L5Q9HCM4 733 aa13.95□□□□□ -0.18
SSX2IP-201ENST00000342203 IQSEC2Q5JU85 1478 aa13.95□□□□□ -0.18
SSX2IP-201ENST00000342203 CPSF1Q10570 1443 aaKnown RBP13.95□□□□□ -0.18
SSX2IP-201ENST00000342203 CALML3P27482 149 aa13.95□□□□□ -0.18
SSX2IP-201ENST00000342203 NBPF14Q5TI25 921 aa13.95□□□□□ -0.18
SSX2IP-201ENST00000342203 ZNF654Q8IZM8 581 aa13.95□□□□□ -0.18
SSX2IP-201ENST00000342203 PLBD2Q8NHP8 589 aa13.95□□□□□ -0.18
SSX2IP-201ENST00000342203 LRRC45Q96CN5 670 aa13.95□□□□□ -0.18
SSX2IP-201ENST00000342203 SLC24A3Q9HC58 644 aa13.95□□□□□ -0.18
SSX2IP-201ENST00000342203 ZNF446Q9NWS9 450 aa13.95□□□□□ -0.18
SSX2IP-201ENST00000342203 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.94□□□□□ -0.183e-6■■□□□ 13.1
SSX2IP-201ENST00000342203 MFAP3LO75121 409 aa13.94□□□□□ -0.18
SSX2IP-201ENST00000342203 DAAM2Q86T65 1068 aa13.94□□□□□ -0.18
SSX2IP-201ENST00000342203 SERPINA10Q9UK55 444 aa13.94□□□□□ -0.18
SSX2IP-201ENST00000342203 HYOU1Q9Y4L1 999 aa13.94□□□□□ -0.18
SSX2IP-201ENST00000342203 LRRC7Q96NW7 1537 aa13.94□□□□□ -0.18
SSX2IP-201ENST00000342203 AATKQ6ZMQ8 1374 aa13.94□□□□□ -0.18
SSX2IP-201ENST00000342203 NNTQ13423 1086 aa13.94□□□□□ -0.18
SSX2IP-201ENST00000342203 LCMT1Q9UIC8 334 aa13.94□□□□□ -0.18
SSX2IP-201ENST00000342203 LRCH2Q5VUJ6 765 aa13.94□□□□□ -0.18
SSX2IP-201ENST00000342203 ADAT2Q7Z6V5 191 aaKnown RBP13.94□□□□□ -0.18
SSX2IP-201ENST00000342203 LACTBP83111 547 aaPredicted RBP13.94□□□□□ -0.18
SSX2IP-201ENST00000342203 GRIPAP1Q4V328 841 aa13.94□□□□□ -0.18
SSX2IP-201ENST00000342203 FERMT2Q96AC1 680 aa13.94□□□□□ -0.18
SSX2IP-201ENST00000342203 NUP58Q9BVL2 599 aa13.94□□□□□ -0.18
SSX2IP-201ENST00000342203 DPH5Q9H2P9 285 aa13.94□□□□□ -0.18
SSX2IP-201ENST00000342203 TBC1D7Q9P0N9 293 aa13.94□□□□□ -0.18
SSX2IP-201ENST00000342203 UHRF1BP1LA0JNW5 1464 aa13.93□□□□□ -0.18
SSX2IP-201ENST00000342203 MAGEB6P1A0A0J9YX57 407 aa13.93□□□□□ -0.18
SSX2IP-201ENST00000342203 MPHOSPH10O00566 681 aaKnown RBP13.93□□□□□ -0.18
SSX2IP-201ENST00000342203 PRR29P0C7W0 189 aa13.93□□□□□ -0.18
SSX2IP-201ENST00000342203 PDE6BP35913 854 aa13.93□□□□□ -0.18
SSX2IP-201ENST00000342203 PTPN12Q05209 780 aaKnown RBP13.93□□□□□ -0.18
SSX2IP-201ENST00000342203 PANX2Q96RD6 677 aa13.93□□□□□ -0.18
SSX2IP-201ENST00000342203 KRT12Q99456 494 aa13.93□□□□□ -0.18
SSX2IP-201ENST00000342203 KIF28PB7ZC32 967 aa13.93□□□□□ -0.18
SSX2IP-201ENST00000342203 SLC9C1Q4G0N8 1177 aa13.93□□□□□ -0.18
SSX2IP-201ENST00000342203 DCAF17Q5H9S7 520 aaPredicted RBP13.93□□□□□ -0.18
SSX2IP-201ENST00000342203 KCNK3O14649 394 aa13.93□□□□□ -0.18
SSX2IP-201ENST00000342203 EHHADHQ08426 723 aa13.93□□□□□ -0.18
SSX2IP-201ENST00000342203 AKNAD1Q5T1N1 836 aa13.93□□□□□ -0.18
SSX2IP-201ENST00000342203 FAM212AQ96EL1 285 aa13.93□□□□□ -0.18
SSX2IP-201ENST00000342203 NCAPGQ9BPX3 1015 aa13.93□□□□□ -0.18
SSX2IP-201ENST00000342203 FUT8Q9BYC5 575 aa13.93□□□□□ -0.18
SSX2IP-201ENST00000342203 PUS7LQ9H0K6 701 aaKnown RBP13.93□□□□□ -0.18
SSX2IP-201ENST00000342203 IRS4O14654 1257 aaPredicted RBP13.93□□□□□ -0.18
SSX2IP-201ENST00000342203 ITGA6P23229 1130 aa13.93□□□□□ -0.18
SSX2IP-201ENST00000342203 SNCBQ16143 134 aa13.93□□□□□ -0.18
SSX2IP-201ENST00000342203 SHC4Q6S5L8 630 aa13.93□□□□□ -0.18
SSX2IP-201ENST00000342203 TTLL7Q6ZT98 887 aa13.93□□□□□ -0.18
SSX2IP-201ENST00000342203 PNPLA6Q8IY17 1366 aa13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 HEXIM1O94992 359 aaKnown RBP13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 TCP1P17987 556 aaKnown RBP13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 IFNAR2P48551 515 aa13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 DNM2P50570 870 aa13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 NEDD9Q14511 834 aa13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 RPS6KA1Q15418 735 aa13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 FANCBQ8NB91 859 aa13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 PRR36Q9H6K5 1346 aa13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 RTL9Q8NET4 1388 aa13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 H3BQF6 201 aa13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 TXKP42681 527 aa13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 RASSF7Q02833 373 aa13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 SF3B2Q13435 895 aaKnown RBP13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 NAA35Q5VZE5 725 aa13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 TRIM68Q6AZZ1 485 aa13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 NOA1Q8NC60 698 aaKnown RBP13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 PARP1P09874 1014 aaKnown RBP13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 TNNI2P48788 182 aa13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 KRT31Q15323 416 aa13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 GKAP1Q5VSY0 366 aaPredicted RBP13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 LRWD1Q9UFC0 647 aa13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 PLEKHG3A1L390 1219 aa13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 KCNA6P17658 529 aa13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 MUM1L1Q5H9M0 696 aa13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 LRRIQ1Q96JM4 1722 aa13.92□□□□□ -0.18
SSX2IP-201ENST00000342203 CCDC26Q8TAB7 109 aa13.91□□□□□ -0.18
SSX2IP-201ENST00000342203 MYO1AQ9UBC5 1043 aa13.91□□□□□ -0.18
SSX2IP-201ENST00000342203 KRT79Q5XKE5 535 aa13.91□□□□□ -0.18
SSX2IP-201ENST00000342203 NELFCDQ8IXH7 590 aa13.91□□□□□ -0.18
SSX2IP-201ENST00000342203 MRRFQ96E11 262 aaKnown RBP13.91□□□□□ -0.18
SSX2IP-201ENST00000342203 CPSF2Q9P2I0 782 aaKnown RBP13.91□□□□□ -0.18
SSX2IP-201ENST00000342203 TSPY3P0CV98 308 aa13.91□□□□□ -0.18
SSX2IP-201ENST00000342203 TSPY8P0CW00 308 aa13.91□□□□□ -0.18
SSX2IP-201ENST00000342203 KLHL30Q0D2K2 578 aa13.91□□□□□ -0.18
SSX2IP-201ENST00000342203 TUBGCP2Q9BSJ2 902 aa13.91□□□□□ -0.18
SSX2IP-201ENST00000342203 ESYT3A0FGR9 886 aa13.91□□□□□ -0.18
SSX2IP-201ENST00000342203 H7C1D1 291 aa13.91□□□□□ -0.18
SSX2IP-201ENST00000342203 MOCS3O95396 460 aa13.91□□□□□ -0.18
SSX2IP-201ENST00000342203 HIBCHQ6NVY1 386 aaPredicted RBP13.91□□□□□ -0.18
SSX2IP-201ENST00000342203 REXO1L1PQ8IX06 675 aa13.91□□□□□ -0.18
SSX2IP-201ENST00000342203 GSDMAQ96QA5 445 aa13.91□□□□□ -0.18
SSX2IP-201ENST00000342203 MCM9Q9NXL9 1143 aa13.91□□□□□ -0.18
SSX2IP-201ENST00000342203 IGSF1Q8N6C5 1336 aa13.91□□□□□ -0.18
SSX2IP-201ENST00000342203 PBRM1Q86U86 1689 aa13.91□□□□□ -0.18
SSX2IP-201ENST00000342203 SASH3O75995 380 aa13.91□□□□□ -0.18
SSX2IP-201ENST00000342203 RPN1P04843 607 aaKnown RBP13.91□□□□□ -0.18
SSX2IP-201ENST00000342203 FMNL3Q8IVF7 1028 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms