RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 A0A1W2PQ27 194 aa8.52□□□□□ -1.05
SRFBP1-201ENST00000339397 A0A1W2PQ64 194 aa8.52□□□□□ -1.05
SRFBP1-201ENST00000339397 A0A1W2PQD8 194 aa8.52□□□□□ -1.05
SRFBP1-201ENST00000339397 USP17L5A8MUK1 530 aa8.52□□□□□ -1.05
SRFBP1-201ENST00000339397 RAD17O75943 681 aa8.52□□□□□ -1.05
SRFBP1-201ENST00000339397 CALM1P0DP23 149 aa8.52□□□□□ -1.05
SRFBP1-201ENST00000339397 CALM2P0DP24 149 aa8.52□□□□□ -1.05
SRFBP1-201ENST00000339397 CALM3P0DP25 149 aa8.52□□□□□ -1.05
SRFBP1-201ENST00000339397 SCG2P13521 617 aa8.52□□□□□ -1.05
SRFBP1-201ENST00000339397 CMA1P23946 247 aa8.52□□□□□ -1.05
SRFBP1-201ENST00000339397 DDX60LQ5H9U9 1706 aaKnown RBP8.52□□□□□ -1.05
SRFBP1-201ENST00000339397 TMED8Q6PL24 325 aaPredicted RBP8.52□□□□□ -1.05
SRFBP1-201ENST00000339397 SLF2Q8IX21 1173 aa8.52□□□□□ -1.05
SRFBP1-201ENST00000339397 LRRC47Q8N1G4 583 aaKnown RBP8.52□□□□□ -1.05
SRFBP1-201ENST00000339397 CNKSR1Q969H4 720 aa8.52□□□□□ -1.05
SRFBP1-201ENST00000339397 DNAJC18Q9H819 358 aa8.52□□□□□ -1.05
SRFBP1-201ENST00000339397 ZNF277Q9NRM2 450 aaPredicted RBP8.52□□□□□ -1.05
SRFBP1-201ENST00000339397 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.52□□□□□ -1.05
SRFBP1-201ENST00000339397 ATF5Q9Y2D1 282 aaPredicted RBP8.52□□□□□ -1.05
SRFBP1-201ENST00000339397 ZBTB12Q9Y330 459 aaPredicted RBP8.52□□□□□ -1.05
SRFBP1-201ENST00000339397 PCNTO95613 3336 aa8.52□□□□□ -1.05
SRFBP1-201ENST00000339397 LAMB1P07942 1786 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 PPIP5K2O43314 1243 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 HMGB2P26583 209 aaKnown RBP8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 ZNF165P49910 485 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 PPP2R5BQ15173 497 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 ZNF174Q15697 407 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 LONRF3Q496Y0 759 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 SASS6Q6UVJ0 657 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 PIK3AP1Q6ZUJ8 805 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 SH3BP5LQ7L8J4 393 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 HOMER1Q86YM7 354 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 FOXP4Q8IVH2 680 aaPredicted RBP8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 NEDD1Q8NHV4 660 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 ANKS1AQ92625 1134 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 TNFRSF25Q93038 417 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 PRMT6Q96LA8 375 aaPredicted RBP8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 TDRD3Q9H7E2 651 aaKnown RBP8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 FAM198AQ9UFP1 575 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 FRMPD2Q68DX3 1309 aaPredicted RBP8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 MYH6P13533 1939 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 ESPNB1AK53 854 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 KLRF2D3W0D1 207 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 SHMT1P34896 483 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 PFKFB3Q16875 520 aaPredicted RBP8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 STRIP1Q5VSL9 837 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 HHIPL2Q6UWX4 724 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 PDILTQ8N807 584 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 OSBPL5Q9H0X9 879 aaPredicted RBP8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 TCP11L1Q9NUJ3 509 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 MYH1P12882 1939 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 PALM3A6NDB9 673 aaPredicted RBP8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 PPP6R2O75170 966 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 KRT2P35908 639 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 BAG6P46379 1132 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 NLRP5P59047 1200 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 ATP2B2Q01814 1243 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 KIAA2012Q0VF49 1180 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 SF3B2Q13435 895 aaKnown RBP8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 GRM4Q14833 912 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 FAM200AQ8TCP9 573 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 EPSTI1Q96J88 318 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 MTMR4Q9NYA4 1195 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 PPP1R1BQ9UD71 204 aaPredicted RBP8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 CLIP2Q9UDT6 1046 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 SERPINB13Q9UIV8 391 aa8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 FBXO2Q9UK22 296 aaPredicted RBP8.51□□□□□ -1.05
SRFBP1-201ENST00000339397 NAV1Q8NEY1 1877 aa8.5□□□□□ -1.05
SRFBP1-201ENST00000339397 SYKP43405 635 aa8.5□□□□□ -1.05
SRFBP1-201ENST00000339397 PNOCQ13519 176 aa8.5□□□□□ -1.05
SRFBP1-201ENST00000339397 DPCR1Q3MIW9 517 aa8.5□□□□□ -1.05
SRFBP1-201ENST00000339397 RESP18Q5W5W9 173 aa8.5□□□□□ -1.05
SRFBP1-201ENST00000339397 WWC2Q6AWC2 1192 aa8.5□□□□□ -1.05
SRFBP1-201ENST00000339397 HEATR3Q7Z4Q2 680 aa8.5□□□□□ -1.05
SRFBP1-201ENST00000339397 GRAMD1CQ8IYS0 662 aa8.5□□□□□ -1.05
SRFBP1-201ENST00000339397 ZDHHC15Q96MV8 337 aa8.5□□□□□ -1.05
SRFBP1-201ENST00000339397 HPSEQ9Y251 543 aa8.5□□□□□ -1.05
SRFBP1-201ENST00000339397 SUGT1Q9Y2Z0 365 aa8.5□□□□□ -1.05
SRFBP1-201ENST00000339397 A0A087X0B3 334 aa8.5□□□□□ -1.05
SRFBP1-201ENST00000339397 MPHOSPH10O00566 681 aaKnown RBP8.5□□□□□ -1.05
SRFBP1-201ENST00000339397 CDC25AP30304 524 aa8.5□□□□□ -1.05
SRFBP1-201ENST00000339397 KIF5BP33176 963 aa8.5□□□□□ -1.05
SRFBP1-201ENST00000339397 JAG1P78504 1218 aa8.5□□□□□ -1.05
SRFBP1-201ENST00000339397 RILPL1Q5EBL4 403 aa8.5□□□□□ -1.05
SRFBP1-201ENST00000339397 ZSCAN29Q8IWY8 852 aaPredicted RBP8.5□□□□□ -1.05
SRFBP1-201ENST00000339397 TTLL6Q8N841 843 aa8.5□□□□□ -1.05
SRFBP1-201ENST00000339397 KRI1Q8N9T8 703 aaKnown RBP8.5□□□□□ -1.05
SRFBP1-201ENST00000339397 SPC24Q8NBT2 197 aa8.5□□□□□ -1.05
SRFBP1-201ENST00000339397 CSRNP2Q9H175 543 aa8.5□□□□□ -1.05
SRFBP1-201ENST00000339397 KIAA1468Q9P260 1216 aa8.5□□□□□ -1.05
SRFBP1-201ENST00000339397 DLEC1Q9Y238 1755 aa8.49□□□□□ -1.05
SRFBP1-201ENST00000339397 POLR2DO15514 142 aaKnown RBP8.49□□□□□ -1.05
SRFBP1-201ENST00000339397 XBP1P17861 261 aa8.49□□□□□ -1.05
SRFBP1-201ENST00000339397 PTPREP23469 700 aa8.49□□□□□ -1.05
SRFBP1-201ENST00000339397 CASP1P29466 404 aa8.49□□□□□ -1.05
SRFBP1-201ENST00000339397 IQCB1Q15051 598 aa8.49□□□□□ -1.05
SRFBP1-201ENST00000339397 UVSSAQ2YD98 709 aa8.49□□□□□ -1.05
SRFBP1-201ENST00000339397 TTBK2Q6IQ55 1244 aa8.49□□□□□ -1.05
SRFBP1-201ENST00000339397 CDAN1Q8IWY9 1227 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms