RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 B4E1Z4 1266 aa14.17□□□□□ -0.14
DFFB-202ENST00000339350 PDE4BQ07343 736 aa14.17□□□□□ -0.14
DFFB-202ENST00000339350 TRMT44Q8IYL2 757 aaKnown RBP14.17□□□□□ -0.14
DFFB-202ENST00000339350 CMTR1Q8N1G2 835 aaKnown RBP14.17□□□□□ -0.14
DFFB-202ENST00000339350 PPP1R12BO60237 982 aaPredicted RBP14.17□□□□□ -0.14
DFFB-202ENST00000339350 ERLIN1O75477 346 aa14.17□□□□□ -0.14
DFFB-202ENST00000339350 LONRF3Q496Y0 759 aa14.17□□□□□ -0.14
DFFB-202ENST00000339350 KRT40Q6A162 431 aa14.17□□□□□ -0.14
DFFB-202ENST00000339350 GRAMD1CQ8IYS0 662 aa14.17□□□□□ -0.14
DFFB-202ENST00000339350 CEP112Q8N8E3 955 aa14.17□□□□□ -0.14
DFFB-202ENST00000339350 SMARCC1Q92922 1105 aaPredicted RBP14.17□□□□□ -0.14
DFFB-202ENST00000339350 KAT14Q9H8E8 782 aa14.17□□□□□ -0.14
DFFB-202ENST00000339350 IDH1O75874 414 aaKnown RBP14.17□□□□□ -0.14
DFFB-202ENST00000339350 METAP2P50579 478 aaKnown RBP eCLIP14.17□□□□□ -0.14
DFFB-202ENST00000339350 ADKP55263 362 aaKnown RBP14.17□□□□□ -0.14
DFFB-202ENST00000339350 E2F5Q15329 346 aa14.17□□□□□ -0.14
DFFB-202ENST00000339350 TBC1D10CQ8IV04 446 aa14.17□□□□□ -0.14
DFFB-202ENST00000339350 FOXP4Q8IVH2 680 aaPredicted RBP14.17□□□□□ -0.14
DFFB-202ENST00000339350 DRAXINQ8NBI3 349 aaPredicted RBP14.17□□□□□ -0.14
DFFB-202ENST00000339350 SETSIPP0DME0 302 aa14.16□□□□□ -0.14
DFFB-202ENST00000339350 IL2RBP14784 551 aa14.16□□□□□ -0.14
DFFB-202ENST00000339350 CMA1P23946 247 aa14.16□□□□□ -0.14
DFFB-202ENST00000339350 GRIN1Q05586 938 aa14.16□□□□□ -0.14
DFFB-202ENST00000339350 SETDB1Q15047 1291 aa14.16□□□□□ -0.14
DFFB-202ENST00000339350 THEMIS2Q5TEJ8 643 aa14.16□□□□□ -0.14
DFFB-202ENST00000339350 AMOTL1Q8IY63 956 aa14.16□□□□□ -0.14
DFFB-202ENST00000339350 RIN2Q8WYP3 895 aaPredicted RBP14.16□□□□□ -0.14
DFFB-202ENST00000339350 SAAL1Q96ER3 474 aa14.16□□□□□ -0.14
DFFB-202ENST00000339350 MPHOSPH8Q99549 860 aa14.16□□□□□ -0.14
DFFB-202ENST00000339350 IRX2Q9BZI1 471 aaPredicted RBP14.16□□□□□ -0.14
DFFB-202ENST00000339350 CHCHD3Q9NX63 227 aaKnown RBP14.16□□□□□ -0.14
DFFB-202ENST00000339350 LMCD1Q9NZU5 365 aa14.16□□□□□ -0.14
DFFB-202ENST00000339350 LMTK3Q96Q04 1460 aa14.16□□□□□ -0.14
DFFB-202ENST00000339350 VWA3AA6NCI4 1184 aa14.16□□□□□ -0.14
DFFB-202ENST00000339350 OATP04181 439 aa14.16□□□□□ -0.14
DFFB-202ENST00000339350 PDHBP11177 359 aa14.16□□□□□ -0.14
DFFB-202ENST00000339350 GBP2P32456 591 aaPredicted RBP14.16□□□□□ -0.14
DFFB-202ENST00000339350 KCNJ6P48051 423 aa14.16□□□□□ -0.14
DFFB-202ENST00000339350 CHMP4BP1P59074 171 aa14.16□□□□□ -0.14
DFFB-202ENST00000339350 PDCD2Q16342 344 aaPredicted RBP14.16□□□□□ -0.14
DFFB-202ENST00000339350 IGSF22Q8N9C0 903 aa14.16□□□□□ -0.14
DFFB-202ENST00000339350 DESI2Q9BSY9 194 aa14.16□□□□□ -0.14
DFFB-202ENST00000339350 RHOXF2BP0C7M4 288 aa14.15□□□□□ -0.14
DFFB-202ENST00000339350 TOP1P11387 765 aaKnown RBP14.15□□□□□ -0.14
DFFB-202ENST00000339350 SLC39A14Q15043 492 aa14.15□□□□□ -0.14
DFFB-202ENST00000339350 BRAPQ7Z569 592 aa14.15□□□□□ -0.14
DFFB-202ENST00000339350 METTL16Q86W50 562 aaKnown RBP14.15□□□□□ -0.14
DFFB-202ENST00000339350 DNAJC10Q8IXB1 793 aa14.15□□□□□ -0.14
DFFB-202ENST00000339350 RHOXF2Q9BQY4 288 aa14.15□□□□□ -0.14
DFFB-202ENST00000339350 PCDHA5Q9Y5H7 936 aa14.15□□□□□ -0.14
DFFB-202ENST00000339350 STRCQ7RTU9 1775 aa14.15□□□□□ -0.14
DFFB-202ENST00000339350 SYF2O95926 243 aaKnown RBP14.15□□□□□ -0.14
DFFB-202ENST00000339350 IRAK1P51617 712 aa14.15□□□□□ -0.14
DFFB-202ENST00000339350 USP4Q13107 963 aa14.15□□□□□ -0.14
DFFB-202ENST00000339350 SLC9C2Q5TAH2 1124 aa14.15□□□□□ -0.14
DFFB-202ENST00000339350 CDCA2Q69YH5 1023 aaPredicted RBP14.15□□□□□ -0.14
DFFB-202ENST00000339350 ZKSCAN3Q9BRR0 538 aa14.15□□□□□ -0.14
DFFB-202ENST00000339350 CRACR2AQ9BSW2 395 aa14.15□□□□□ -0.14
DFFB-202ENST00000339350 ADAMTS2O95450 1211 aa14.15□□□□□ -0.15
DFFB-202ENST00000339350 USP5P45974 858 aa14.15□□□□□ -0.15
DFFB-202ENST00000339350 VSNL1P62760 191 aa14.15□□□□□ -0.15
DFFB-202ENST00000339350 MYL5Q02045 173 aa14.15□□□□□ -0.15
DFFB-202ENST00000339350 MSL3Q8N5Y2 521 aaKnown RBP14.15□□□□□ -0.15
DFFB-202ENST00000339350 LMBR1Q8WVP7 490 aa14.15□□□□□ -0.15
DFFB-202ENST00000339350 SHTN1A0MZ66 631 aa14.14□□□□□ -0.15
DFFB-202ENST00000339350 KIAA0754O94854 1291 aa14.14□□□□□ -0.15
DFFB-202ENST00000339350 PRPF6O94906 941 aaKnown RBP14.14□□□□□ -0.15
DFFB-202ENST00000339350 SSBP05455 408 aaKnown RBP eCLIP14.14□□□□□ -0.15
DFFB-202ENST00000339350 BMP6P22004 513 aa14.14□□□□□ -0.15
DFFB-202ENST00000339350 MCAMP43121 646 aa14.14□□□□□ -0.15
DFFB-202ENST00000339350 KARSQ15046 597 aaKnown RBP14.14□□□□□ -0.15
DFFB-202ENST00000339350 MYLK4Q86YV6 388 aaPredicted RBP14.14□□□□□ -0.15
DFFB-202ENST00000339350 BPIFA3Q9BQP9 254 aa14.14□□□□□ -0.15
DFFB-202ENST00000339350 KCNJ14Q9UNX9 436 aa14.14□□□□□ -0.15
DFFB-202ENST00000339350 PHRF1Q9P1Y6 1649 aaKnown RBP14.14□□□□□ -0.15
DFFB-202ENST00000339350 SNAP23O00161 211 aa14.14□□□□□ -0.15
DFFB-202ENST00000339350 FSBPO95073 299 aa14.14□□□□□ -0.15
DFFB-202ENST00000339350 TLDC1Q6P9B6 456 aa14.14□□□□□ -0.15
DFFB-202ENST00000339350 APPBP2Q92624 585 aa14.14□□□□□ -0.15
DFFB-202ENST00000339350 SLC26A6Q9BXS9 759 aa14.14□□□□□ -0.15
DFFB-202ENST00000339350 INTS13Q9NVM9 706 aa14.14□□□□□ -0.15
DFFB-202ENST00000339350 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.14□□□□□ -0.15
DFFB-202ENST00000339350 KIF1AQ12756 1690 aa14.14□□□□□ -0.15
DFFB-202ENST00000339350 CDHR2Q9BYE9 1310 aa14.13□□□□□ -0.15
DFFB-202ENST00000339350 PCDH11XQ9BZA7 1347 aa14.13□□□□□ -0.15
DFFB-202ENST00000339350 PCDH11YQ9BZA8 1340 aa14.13□□□□□ -0.15
DFFB-202ENST00000339350 EZRP15311 586 aaKnown RBP14.13□□□□□ -0.15
DFFB-202ENST00000339350 RRP12Q5JTH9 1297 aaKnown RBP14.13□□□□□ -0.15
DFFB-202ENST00000339350 TOGARAM2Q6ZUX3 1019 aa14.13□□□□□ -0.15
DFFB-202ENST00000339350 HELBQ8NG08 1087 aaPredicted RBP14.13□□□□□ -0.15
DFFB-202ENST00000339350 MYO5AQ9Y4I1 1855 aaKnown RBP14.13□□□□□ -0.15
DFFB-202ENST00000339350 RANBP6O60518 1105 aaKnown RBP14.13□□□□□ -0.15
DFFB-202ENST00000339350 GUCY1A2P33402 732 aa14.13□□□□□ -0.15
DFFB-202ENST00000339350 CTDSPL2Q05D32 466 aa14.13□□□□□ -0.15
DFFB-202ENST00000339350 METTL24Q5JXM2 366 aa14.13□□□□□ -0.15
DFFB-202ENST00000339350 OLFM4Q6UX06 510 aa14.13□□□□□ -0.15
DFFB-202ENST00000339350 SCLT1Q96NL6 688 aa14.13□□□□□ -0.15
DFFB-202ENST00000339350 GPR108Q9NPR9 543 aa14.13□□□□□ -0.15
DFFB-202ENST00000339350 RAB21Q9UL25 225 aa14.13□□□□□ -0.15
DFFB-202ENST00000339350 ANGEL1Q9UNK9 670 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms