RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 CT47A1Q5JQC4 288 aaPredicted RBP22.96■■□□□ 1.27
RUNX3-202ENST00000338888 FBXW10Q5XX13 1052 aa22.96■■□□□ 1.27
RUNX3-202ENST00000338888 CCDC85AQ96PX6 553 aaPredicted RBP22.96■■□□□ 1.27
RUNX3-202ENST00000338888 STRN4Q9NRL3 753 aa22.96■■□□□ 1.27
RUNX3-202ENST00000338888 CCDC91Q7Z6B0 441 aa22.95■■□□□ 1.27
RUNX3-202ENST00000338888 WASF1Q92558 559 aa22.95■■□□□ 1.27
RUNX3-202ENST00000338888 TTLL7Q6ZT98 887 aa22.95■■□□□ 1.26
RUNX3-202ENST00000338888 BCAS4Q8TDM0 211 aa22.95■■□□□ 1.26
RUNX3-202ENST00000338888 CEP89Q96ST8 783 aa22.95■■□□□ 1.26
RUNX3-202ENST00000338888 FOXP1Q9H334 677 aaPredicted RBP22.95■■□□□ 1.26
RUNX3-202ENST00000338888 SPEF2Q9C093 1822 aa22.95■■□□□ 1.26
RUNX3-202ENST00000338888 PSMD14O00487 310 aa22.95■■□□□ 1.26
RUNX3-202ENST00000338888 IFIT3O14879 490 aaKnown RBP22.95■■□□□ 1.26
RUNX3-202ENST00000338888 MNAT1P51948 309 aa22.95■■□□□ 1.26
RUNX3-202ENST00000338888 NBPF14Q5TI25 921 aa22.95■■□□□ 1.26
RUNX3-202ENST00000338888 SGMS1Q86VZ5 419 aa22.95■■□□□ 1.26
RUNX3-202ENST00000338888 TEX2Q8IWB9 1127 aa22.95■■□□□ 1.26
RUNX3-202ENST00000338888 STK36Q9NRP7 1315 aa22.94■■□□□ 1.26
RUNX3-202ENST00000338888 IFNAR1P17181 557 aa22.94■■□□□ 1.26
RUNX3-202ENST00000338888 HNRNPH1P31943 449 aaKnown RBP22.94■■□□□ 1.26
RUNX3-202ENST00000338888 CCNI2Q6ZMN8 369 aaPredicted RBP22.94■■□□□ 1.26
RUNX3-202ENST00000338888 CEP131Q9UPN4 1083 aa22.94■■□□□ 1.26
RUNX3-202ENST00000338888 COPB1P53618 953 aaKnown RBP22.94■■□□□ 1.26
RUNX3-202ENST00000338888 ZSWIM5Q9P217 1185 aa22.94■■□□□ 1.26
RUNX3-202ENST00000338888 SOS2Q07890 1332 aaPredicted RBP22.93■■□□□ 1.26
RUNX3-202ENST00000338888 ARFGEF2Q9Y6D5 1785 aa22.93■■□□□ 1.26
RUNX3-202ENST00000338888 TARSL2A2RTX5 802 aaKnown RBP22.93■■□□□ 1.26
RUNX3-202ENST00000338888 GOLGA6BA6NDN3 693 aa22.93■■□□□ 1.26
RUNX3-202ENST00000338888 PHKG2P15735 406 aa22.93■■□□□ 1.26
RUNX3-202ENST00000338888 CCDC122Q5T0U0 273 aa22.93■■□□□ 1.26
RUNX3-202ENST00000338888 TTC19Q6DKK2 380 aaPredicted RBP22.93■■□□□ 1.26
RUNX3-202ENST00000338888 LIMA1Q9UHB6 759 aaKnown RBP22.93■■□□□ 1.26
RUNX3-202ENST00000338888 WDR17Q8IZU2 1322 aa22.93■■□□□ 1.26
RUNX3-202ENST00000338888 ECM29Q5VYK3 1845 aa22.93■■□□□ 1.26
RUNX3-202ENST00000338888 MEGF6O75095 1541 aa22.93■■□□□ 1.26
RUNX3-202ENST00000338888 SH3RF1Q7Z6J0 888 aa22.93■■□□□ 1.26
RUNX3-202ENST00000338888 TRIM22Q8IYM9 498 aa22.93■■□□□ 1.26
RUNX3-202ENST00000338888 GSDMAQ96QA5 445 aa22.93■■□□□ 1.26
RUNX3-202ENST00000338888 CAPS2Q9BXY5 557 aa22.93■■□□□ 1.26
RUNX3-202ENST00000338888 FAM205CA6NFA0 338 aa22.92■■□□□ 1.26
RUNX3-202ENST00000338888 CCDC57Q2TAC2 916 aa22.92■■□□□ 1.26
RUNX3-202ENST00000338888 CAGE1Q8TC20 777 aa22.92■■□□□ 1.26
RUNX3-202ENST00000338888 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.92■■□□□ 1.26
RUNX3-202ENST00000338888 HAUS4Q9H6D7 363 aa22.92■■□□□ 1.26
RUNX3-202ENST00000338888 ZNF185O15231 689 aa22.92■■□□□ 1.26
RUNX3-202ENST00000338888 ADD2P35612 726 aa22.92■■□□□ 1.26
RUNX3-202ENST00000338888 SYMPKQ92797 1274 aaKnown RBP22.92■■□□□ 1.26
RUNX3-202ENST00000338888 JAKMIP2Q96AA8 810 aa22.92■■□□□ 1.26
RUNX3-202ENST00000338888 ZBTB3Q9H5J0 574 aa22.92■■□□□ 1.26
RUNX3-202ENST00000338888 LRRC10BA6NIK2 292 aa22.91■■□□□ 1.26
RUNX3-202ENST00000338888 NBPF26B4DH59 902 aa22.91■■□□□ 1.26
RUNX3-202ENST00000338888 GNGT1P63211 74 aa22.91■■□□□ 1.26
RUNX3-202ENST00000338888 PPFIA1Q13136 1202 aa22.91■■□□□ 1.26
RUNX3-202ENST00000338888 RRAGBQ5VZM2 374 aa22.91■■□□□ 1.26
RUNX3-202ENST00000338888 NBPF10Q6P3W6 841 aaKnown RBP22.91■■□□□ 1.26
RUNX3-202ENST00000338888 TOM1L2Q6ZVM7 507 aa22.91■■□□□ 1.26
RUNX3-202ENST00000338888 NBPF15Q8N660 670 aa22.91■■□□□ 1.26
RUNX3-202ENST00000338888 BLZF1Q9H2G9 400 aa22.91■■□□□ 1.26
RUNX3-202ENST00000338888 AATFQ9NY61 560 aaKnown RBP eCLIP22.91■■□□□ 1.26
RUNX3-202ENST00000338888 SAMM50Q9Y512 469 aa22.91■■□□□ 1.26
RUNX3-202ENST00000338888 COL18A1P39060 1754 aa22.91■■□□□ 1.26
RUNX3-202ENST00000338888 PAPD7Q5XG87 772 aaKnown RBP22.91■■□□□ 1.26
RUNX3-202ENST00000338888 KCNV1Q6PIU1 500 aa22.91■■□□□ 1.26
RUNX3-202ENST00000338888 ZKSCAN3Q9BRR0 538 aa22.91■■□□□ 1.26
RUNX3-202ENST00000338888 GNL3LQ9NVN8 582 aaKnown RBP22.91■■□□□ 1.26
RUNX3-202ENST00000338888 IDH1O75874 414 aaKnown RBP22.9■■□□□ 1.26
RUNX3-202ENST00000338888 MCAMP43121 646 aa22.9■■□□□ 1.26
RUNX3-202ENST00000338888 HERVK_113P62684 666 aa22.9■■□□□ 1.26
RUNX3-202ENST00000338888 UBXN1Q04323 297 aa22.9■■□□□ 1.26
RUNX3-202ENST00000338888 CTDSPL2Q05D32 466 aa22.9■■□□□ 1.26
RUNX3-202ENST00000338888 CAMTA1Q9Y6Y1 1673 aa22.9■■□□□ 1.26
RUNX3-202ENST00000338888 PDE2AO00408 941 aaPredicted RBP22.9■■□□□ 1.26
RUNX3-202ENST00000338888 INPP5BP32019 993 aa22.9■■□□□ 1.26
RUNX3-202ENST00000338888 LIFRP42702 1097 aa22.9■■□□□ 1.26
RUNX3-202ENST00000338888 TRIM14Q14142 442 aa22.9■■□□□ 1.26
RUNX3-202ENST00000338888 TTC26A0AVF1 554 aa22.89■■□□□ 1.26
RUNX3-202ENST00000338888 SHTN1A0MZ66 631 aa22.89■■□□□ 1.26
RUNX3-202ENST00000338888 KCNJ18B7U540 433 aa22.89■■□□□ 1.26
RUNX3-202ENST00000338888 CKAP4Q07065 602 aaKnown RBP22.89■■□□□ 1.26
RUNX3-202ENST00000338888 C2orf54Q08AI8 447 aa22.89■■□□□ 1.26
RUNX3-202ENST00000338888 KCNJ12Q14500 433 aa22.89■■□□□ 1.26
RUNX3-202ENST00000338888 TTF1Q15361 905 aaPredicted RBP22.89■■□□□ 1.26
RUNX3-202ENST00000338888 TBC1D2BQ9UPU7 963 aa22.89■■□□□ 1.26
RUNX3-202ENST00000338888 GSCP56915 257 aaPredicted RBP22.89■■□□□ 1.25
RUNX3-202ENST00000338888 RTN1Q16799 776 aa22.89■■□□□ 1.25
RUNX3-202ENST00000338888 TCP11X2Q5H9J9 407 aa22.89■■□□□ 1.25
RUNX3-202ENST00000338888 EIF3HO15372 352 aaKnown RBP eCLIP22.88■■□□□ 1.25
RUNX3-202ENST00000338888 SND1Q7KZF4 910 aaKnown RBP eCLIP22.88■■□□□ 1.25
RUNX3-202ENST00000338888 IFNL2Q8IZJ0 200 aa22.88■■□□□ 1.25
RUNX3-202ENST00000338888 RPGRIP1Q96KN7 1286 aa22.88■■□□□ 1.25
RUNX3-202ENST00000338888 CXorf56Q9H5V9 222 aa22.88■■□□□ 1.25
RUNX3-202ENST00000338888 GRIN2DO15399 1336 aa22.88■■□□□ 1.25
RUNX3-202ENST00000338888 TRIM75PA6NK02 468 aa22.88■■□□□ 1.25
RUNX3-202ENST00000338888 CYP27B1O15528 508 aa22.88■■□□□ 1.25
RUNX3-202ENST00000338888 CHRM1P11229 460 aaPredicted RBP22.88■■□□□ 1.25
RUNX3-202ENST00000338888 ANKRD20A12PQ8NF67 263 aa22.88■■□□□ 1.25
RUNX3-202ENST00000338888 OR8K1Q8NGG5 319 aa22.88■■□□□ 1.25
RUNX3-202ENST00000338888 MAPK8IP1Q9UQF2 711 aa22.88■■□□□ 1.25
RUNX3-202ENST00000338888 ADAMTS7Q9UKP4 1686 aa22.87■■□□□ 1.25
RUNX3-202ENST00000338888 DEXIO95424 95 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms