RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 CDC25AP30304 524 aa14.73□□□□□ -0.05
COL2A1-201ENST00000337299 COPB1P53618 953 aaKnown RBP14.73□□□□□ -0.05
COL2A1-201ENST00000337299 IFT74Q96LB3 600 aa14.73□□□□□ -0.05
COL2A1-201ENST00000337299 PYM1Q9BRP8 204 aaKnown RBP14.73□□□□□ -0.05
COL2A1-201ENST00000337299 DBNLQ9UJU6 430 aaKnown RBP14.73□□□□□ -0.05
COL2A1-201ENST00000337299 V9GY48 417 aaPredicted RBP14.73□□□□□ -0.05
COL2A1-201ENST00000337299 PREX2Q70Z35 1606 aa14.73□□□□□ -0.05
COL2A1-201ENST00000337299 RNMTO43148 476 aaKnown RBP14.73□□□□□ -0.05
COL2A1-201ENST00000337299 SMIM24O75264 130 aa14.73□□□□□ -0.05
COL2A1-201ENST00000337299 SESN3P58005 492 aa14.73□□□□□ -0.05
COL2A1-201ENST00000337299 ZBTB16Q05516 673 aa14.73□□□□□ -0.05
COL2A1-201ENST00000337299 PDE4DQ08499 809 aa14.73□□□□□ -0.05
COL2A1-201ENST00000337299 IFIT1BQ5T764 474 aaKnown RBP14.73□□□□□ -0.05
COL2A1-201ENST00000337299 PIK3AP1Q6ZUJ8 805 aa14.73□□□□□ -0.05
COL2A1-201ENST00000337299 TBC1D1Q86TI0 1168 aaPredicted RBP14.73□□□□□ -0.05
COL2A1-201ENST00000337299 NOSTRINQ8IVI9 506 aa14.73□□□□□ -0.05
COL2A1-201ENST00000337299 KRT12Q99456 494 aa14.73□□□□□ -0.05
COL2A1-201ENST00000337299 HEXIM1O94992 359 aaKnown RBP14.73□□□□□ -0.05
COL2A1-201ENST00000337299 ELF1P32519 619 aa14.73□□□□□ -0.05
COL2A1-201ENST00000337299 MYO1EQ12965 1108 aa14.73□□□□□ -0.05
COL2A1-201ENST00000337299 DAAM2Q86T65 1068 aa14.73□□□□□ -0.05
COL2A1-201ENST00000337299 TRIM58Q8NG06 486 aa14.73□□□□□ -0.05
COL2A1-201ENST00000337299 SPDL1Q96EA4 605 aa14.73□□□□□ -0.05
COL2A1-201ENST00000337299 SWAP70Q9UH65 585 aa14.73□□□□□ -0.05
COL2A1-201ENST00000337299 HYOU1Q9Y4L1 999 aa14.73□□□□□ -0.05
COL2A1-201ENST00000337299 CD2APQ9Y5K6 639 aa14.73□□□□□ -0.05
COL2A1-201ENST00000337299 CFAP74Q9C0B2 1584 aa14.73□□□□□ -0.05
COL2A1-201ENST00000337299 ESYT3A0FGR9 886 aa14.72□□□□□ -0.05
COL2A1-201ENST00000337299 GRIPAP1Q4V328 841 aa14.72□□□□□ -0.05
COL2A1-201ENST00000337299 ANKRD42Q8N9B4 389 aa14.72□□□□□ -0.05
COL2A1-201ENST00000337299 YY1AP1Q9H869 796 aa14.72□□□□□ -0.05
COL2A1-201ENST00000337299 FAM184BQ9ULE4 1060 aa14.72□□□□□ -0.05
COL2A1-201ENST00000337299 ENO4A6NNW6 628 aa14.72□□□□□ -0.05
COL2A1-201ENST00000337299 ADAT2Q7Z6V5 191 aaKnown RBP14.72□□□□□ -0.05
COL2A1-201ENST00000337299 THOC1Q96FV9 657 aaKnown RBP14.72□□□□□ -0.05
COL2A1-201ENST00000337299 PSD3Q9NYI0 1048 aa14.72□□□□□ -0.05
COL2A1-201ENST00000337299 NDUFA10O95299 355 aa14.72□□□□□ -0.05
COL2A1-201ENST00000337299 GUCY1A3Q02108 690 aa14.72□□□□□ -0.05
COL2A1-201ENST00000337299 PRPF38AQ8NAV1 312 aaKnown RBP14.72□□□□□ -0.05
COL2A1-201ENST00000337299 TSPOAP1O95153 1857 aa14.72□□□□□ -0.05
COL2A1-201ENST00000337299 KIF1CO43896 1103 aaKnown RBP14.72□□□□□ -0.05
COL2A1-201ENST00000337299 TFRCP02786 760 aaKnown RBP14.72□□□□□ -0.05
COL2A1-201ENST00000337299 EPHB4P54760 987 aa14.72□□□□□ -0.05
COL2A1-201ENST00000337299 IFI16Q16666 785 aaKnown RBP14.72□□□□□ -0.05
COL2A1-201ENST00000337299 ENOX1Q8TC92 643 aaKnown RBP14.72□□□□□ -0.05
COL2A1-201ENST00000337299 COG1Q8WTW3 980 aa14.72□□□□□ -0.05
COL2A1-201ENST00000337299 FAM167BQ9BTA0 163 aa14.72□□□□□ -0.05
COL2A1-201ENST00000337299 KRT23Q9C075 422 aa14.72□□□□□ -0.05
COL2A1-201ENST00000337299 KLC4Q9NSK0 619 aa14.72□□□□□ -0.05
COL2A1-201ENST00000337299 NFU1Q9UMS0 254 aa14.72□□□□□ -0.05
COL2A1-201ENST00000337299 MFAP3LO75121 409 aa14.71□□□□□ -0.05
COL2A1-201ENST00000337299 CCDC38Q502W7 563 aa14.71□□□□□ -0.05
COL2A1-201ENST00000337299 MRRFQ96E11 262 aaKnown RBP14.71□□□□□ -0.05
COL2A1-201ENST00000337299 POLR1AO95602 1720 aaPredicted RBP14.71□□□□□ -0.05
COL2A1-201ENST00000337299 TRPM1Q7Z4N2 1603 aa14.71□□□□□ -0.05
COL2A1-201ENST00000337299 TSPY2A6NKD2 308 aa14.71□□□□□ -0.05
COL2A1-201ENST00000337299 CHGBP05060 677 aa14.71□□□□□ -0.05
COL2A1-201ENST00000337299 CTDSPL2Q05D32 466 aa14.71□□□□□ -0.05
COL2A1-201ENST00000337299 SETDB1Q15047 1291 aa14.71□□□□□ -0.05
COL2A1-201ENST00000337299 DTHD1Q6ZMT9 781 aa14.71□□□□□ -0.05
COL2A1-201ENST00000337299 REXO1L1PQ8IX06 675 aa14.71□□□□□ -0.05
COL2A1-201ENST00000337299 TCEAL9Q9UHQ7 104 aa14.71□□□□□ -0.05
COL2A1-201ENST00000337299 ZFYVE16Q7Z3T8 1539 aa14.71□□□□□ -0.06
COL2A1-201ENST00000337299 HIP1RO75146 1068 aa14.71□□□□□ -0.06
COL2A1-201ENST00000337299 PRDM1O75626 825 aa14.71□□□□□ -0.06
COL2A1-201ENST00000337299 FGAP02671 866 aa14.71□□□□□ -0.06
COL2A1-201ENST00000337299 IRAK1P51617 712 aa14.71□□□□□ -0.06
COL2A1-201ENST00000337299 CSRNP2Q9H175 543 aa14.71□□□□□ -0.06
COL2A1-201ENST00000337299 DDX21Q9NR30 783 aaKnown RBP eCLIP14.71□□□□□ -0.06
COL2A1-201ENST00000337299 BTG4Q9NY30 223 aa14.71□□□□□ -0.06
COL2A1-201ENST00000337299 KCNK3O14649 394 aa14.7□□□□□ -0.06
COL2A1-201ENST00000337299 NAA35Q5VZE5 725 aa14.7□□□□□ -0.06
COL2A1-201ENST00000337299 MKNK2Q9HBH9 465 aa14.7□□□□□ -0.06
COL2A1-201ENST00000337299 BICDL2A1A5D9 508 aa14.7□□□□□ -0.06
COL2A1-201ENST00000337299 GIGYF1O75420 1035 aaPredicted RBP14.7□□□□□ -0.06
COL2A1-201ENST00000337299 TCP1P17987 556 aaKnown RBP14.7□□□□□ -0.06
COL2A1-201ENST00000337299 EHHADHQ08426 723 aa14.7□□□□□ -0.06
COL2A1-201ENST00000337299 TTC38Q5R3I4 469 aa14.7□□□□□ -0.06
COL2A1-201ENST00000337299 PANX2Q96RD6 677 aa14.7□□□□□ -0.06
COL2A1-201ENST00000337299 DSCC1Q9BVC3 393 aa14.7□□□□□ -0.06
COL2A1-201ENST00000337299 PPP1R1BQ9UD71 204 aaPredicted RBP14.7□□□□□ -0.06
COL2A1-201ENST00000337299 SCP2P22307 547 aa14.7□□□□□ -0.06
COL2A1-201ENST00000337299 BEND6Q5SZJ8 279 aaPredicted RBP14.7□□□□□ -0.06
COL2A1-201ENST00000337299 ZNF790Q6PG37 636 aa14.7□□□□□ -0.06
COL2A1-201ENST00000337299 TRMT1LQ7Z2T5 733 aaKnown RBP14.7□□□□□ -0.06
COL2A1-201ENST00000337299 HEATR3Q7Z4Q2 680 aa14.7□□□□□ -0.06
COL2A1-201ENST00000337299 ARHGEF2Q92974 986 aaKnown RBP14.7□□□□□ -0.06
COL2A1-201ENST00000337299 SASH1O94885 1247 aa14.69□□□□□ -0.06
COL2A1-201ENST00000337299 NR5A1Q13285 461 aa14.69□□□□□ -0.06
COL2A1-201ENST00000337299 ESR2Q92731 530 aa14.69□□□□□ -0.06
COL2A1-201ENST00000337299 STX8Q9UNK0 236 aa14.69□□□□□ -0.06
COL2A1-201ENST00000337299 B4DLN1 442 aa14.69□□□□□ -0.06
COL2A1-201ENST00000337299 CTNND1O60716 968 aaKnown RBP14.69□□□□□ -0.06
COL2A1-201ENST00000337299 DEXIO95424 95 aa14.69□□□□□ -0.06
COL2A1-201ENST00000337299 PROSER3Q2NL68 480 aa14.69□□□□□ -0.06
COL2A1-201ENST00000337299 CCDC26Q8TAB7 109 aa14.69□□□□□ -0.06
COL2A1-201ENST00000337299 MYO1AQ9UBC5 1043 aa14.69□□□□□ -0.06
COL2A1-201ENST00000337299 LRWD1Q9UFC0 647 aa14.69□□□□□ -0.06
COL2A1-201ENST00000337299 TRAF5O00463 557 aa14.69□□□□□ -0.06
COL2A1-201ENST00000337299 MOCS3O95396 460 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms