RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 MCTP2Q6DN12 878 aa16.8■□□□□ 0.28
C9orf47-201ENST00000334490 MCF2L2Q86YR7 1114 aa16.8■□□□□ 0.28
C9orf47-201ENST00000334490 CELF1Q92879 486 aaKnown RBP16.8■□□□□ 0.28
C9orf47-201ENST00000334490 GOLGA6L10A0A0M3HER8 536 aa16.8■□□□□ 0.28
C9orf47-201ENST00000334490 USP17L8P0C7I0 530 aa16.8■□□□□ 0.28
C9orf47-201ENST00000334490 DHX37Q8IY37 1157 aaKnown RBP16.8■□□□□ 0.28
C9orf47-201ENST00000334490 DYDC1Q8WWB3 177 aa16.8■□□□□ 0.28
C9orf47-201ENST00000334490 PIH1D3Q9NQM4 214 aaKnown RBP16.8■□□□□ 0.28
C9orf47-201ENST00000334490 MINPP1Q9UNW1 487 aa16.8■□□□□ 0.28
C9orf47-201ENST00000334490 MSANTD4Q8NCY6 345 aa16.8■□□□□ 0.28
C9orf47-201ENST00000334490 CLSTN2Q9H4D0 955 aa16.8■□□□□ 0.28
C9orf47-201ENST00000334490 DNAI1Q9UI46 699 aa16.8■□□□□ 0.28
C9orf47-201ENST00000334490 PNMA2Q9UL42 364 aa16.8■□□□□ 0.28
C9orf47-201ENST00000334490 PCDHA12Q9UN75 941 aa16.8■□□□□ 0.28
C9orf47-201ENST00000334490 KRT86O43790 486 aa16.8■□□□□ 0.28
C9orf47-201ENST00000334490 TTLL1O95922 423 aa16.8■□□□□ 0.28
C9orf47-201ENST00000334490 NT5C3AQ9H0P0 336 aa16.8■□□□□ 0.28
C9orf47-201ENST00000334490 TTC12Q9H892 705 aaPredicted RBP16.8■□□□□ 0.28
C9orf47-201ENST00000334490 AMNQ9BXJ7 453 aa16.79■□□□□ 0.28
C9orf47-201ENST00000334490 PI4KBQ9UBF8 816 aa16.79■□□□□ 0.28
C9orf47-201ENST00000334490 XRCC6P12956 609 aaKnown RBP eCLIP16.79■□□□□ 0.28
C9orf47-201ENST00000334490 PRPHP41219 470 aa16.79■□□□□ 0.28
C9orf47-201ENST00000334490 E9PCH4 1651 aa16.79■□□□□ 0.28
C9orf47-201ENST00000334490 CARMIL3Q8ND23 1372 aa16.79■□□□□ 0.28
C9orf47-201ENST00000334490 CALUO43852 315 aaPredicted RBP16.79■□□□□ 0.28
C9orf47-201ENST00000334490 KIF22Q14807 665 aa16.79■□□□□ 0.28
C9orf47-201ENST00000334490 APOA5Q6Q788 366 aa16.79■□□□□ 0.28
C9orf47-201ENST00000334490 NEK8Q86SG6 692 aa16.79■□□□□ 0.28
C9orf47-201ENST00000334490 MLKLQ8NB16 471 aa16.79■□□□□ 0.28
C9orf47-201ENST00000334490 RNF216Q9NWF9 866 aaPredicted RBP16.79■□□□□ 0.28
C9orf47-201ENST00000334490 NELFCDQ8IXH7 590 aa16.79■□□□□ 0.28
C9orf47-201ENST00000334490 TMEM110-MUSTN1A8MSY1 372 aa16.78■□□□□ 0.28
C9orf47-201ENST00000334490 PPM1FP49593 454 aaPredicted RBP16.78■□□□□ 0.28
C9orf47-201ENST00000334490 PAK1Q13153 545 aa16.78■□□□□ 0.28
C9orf47-201ENST00000334490 TRPC3Q13507 836 aa16.78■□□□□ 0.28
C9orf47-201ENST00000334490 MIGA2Q7L4E1 593 aa16.78■□□□□ 0.28
C9orf47-201ENST00000334490 LMBR1Q8WVP7 490 aa16.78■□□□□ 0.28
C9orf47-201ENST00000334490 CAMSAP1Q5T5Y3 1602 aa16.78■□□□□ 0.28
C9orf47-201ENST00000334490 GCNT3O95395 438 aa16.78■□□□□ 0.28
C9orf47-201ENST00000334490 LMAN1P49257 510 aa16.78■□□□□ 0.28
C9orf47-201ENST00000334490 POSTNQ15063 836 aa16.78■□□□□ 0.28
C9orf47-201ENST00000334490 MRPL44Q9H9J2 332 aaKnown RBP16.78■□□□□ 0.28
C9orf47-201ENST00000334490 CYP2D7A0A087X1C5 515 aa16.78■□□□□ 0.28
C9orf47-201ENST00000334490 NBPF26B4DH59 902 aa16.78■□□□□ 0.28
C9orf47-201ENST00000334490 EXOC3O60645 756 aa16.78■□□□□ 0.28
C9orf47-201ENST00000334490 KRT5P13647 590 aa16.78■□□□□ 0.28
C9orf47-201ENST00000334490 NBPF10Q6P3W6 841 aaKnown RBP16.78■□□□□ 0.28
C9orf47-201ENST00000334490 NBPF15Q8N660 670 aa16.78■□□□□ 0.28
C9orf47-201ENST00000334490 DYNLL2Q96FJ2 89 aa16.78■□□□□ 0.28
C9orf47-201ENST00000334490 BRD1O95696 1058 aa16.77■□□□□ 0.28
C9orf47-201ENST00000334490 TECP42680 631 aa16.77■□□□□ 0.28
C9orf47-201ENST00000334490 MCAMP43121 646 aa16.77■□□□□ 0.28
C9orf47-201ENST00000334490 NFIXQ14938 502 aa16.77■□□□□ 0.28
C9orf47-201ENST00000334490 CDAN1Q8IWY9 1227 aa16.77■□□□□ 0.28
C9orf47-201ENST00000334490 CCDC97Q96F63 343 aaPredicted RBP16.77■□□□□ 0.28
C9orf47-201ENST00000334490 SELENOOQ9BVL4 669 aa16.77■□□□□ 0.28
C9orf47-201ENST00000334490 ASPRV1Q53RT3 343 aa16.77■□□□□ 0.28
C9orf47-201ENST00000334490 FAM47CQ5HY64 1035 aa16.77■□□□□ 0.28
C9orf47-201ENST00000334490 GALNT17Q6IS24 598 aa16.77■□□□□ 0.28
C9orf47-201ENST00000334490 KCTD1Q719H9 257 aa16.77■□□□□ 0.28
C9orf47-201ENST00000334490 OTUD6AQ7L8S5 288 aa16.77■□□□□ 0.28
C9orf47-201ENST00000334490 CNGA4Q8IV77 575 aa16.77■□□□□ 0.28
C9orf47-201ENST00000334490 USP28Q96RU2 1077 aa16.77■□□□□ 0.28
C9orf47-201ENST00000334490 PTPRMP28827 1452 aa16.77■□□□□ 0.28
C9orf47-201ENST00000334490 ERCC3P19447 782 aa16.77■□□□□ 0.28
C9orf47-201ENST00000334490 CNGA1P29973 690 aa16.77■□□□□ 0.28
C9orf47-201ENST00000334490 ISCA1Q9BUE6 129 aa16.77■□□□□ 0.28
C9orf47-201ENST00000334490 BLZF1Q9H2G9 400 aa16.77■□□□□ 0.28
C9orf47-201ENST00000334490 BCCIPQ9P287 314 aaKnown RBP eCLIP16.77■□□□□ 0.28
C9orf47-201ENST00000334490 ABCA6Q8N139 1617 aa16.77■□□□□ 0.27
C9orf47-201ENST00000334490 MADDQ8WXG6 1647 aa16.77■□□□□ 0.27
C9orf47-201ENST00000334490 M0QZ92 97 aa16.77■□□□□ 0.27
C9orf47-201ENST00000334490 SORBS3O60504 671 aa16.77■□□□□ 0.27
C9orf47-201ENST00000334490 GUCA1BQ9UMX6 200 aa16.77■□□□□ 0.27
C9orf47-201ENST00000334490 GADD45BO75293 160 aaPredicted RBP16.76■□□□□ 0.27
C9orf47-201ENST00000334490 KCTD2Q14681 263 aa16.76■□□□□ 0.27
C9orf47-201ENST00000334490 PLA2G4DQ86XP0 818 aa16.76■□□□□ 0.27
C9orf47-201ENST00000334490 PNPLA6Q8IY17 1366 aa16.76■□□□□ 0.27
C9orf47-201ENST00000334490 KIAA0754O94854 1291 aa16.76■□□□□ 0.27
C9orf47-201ENST00000334490 SCRN1Q12765 414 aa16.76■□□□□ 0.27
C9orf47-201ENST00000334490 SMIM5Q71RC9 77 aa16.76■□□□□ 0.27
C9orf47-201ENST00000334490 FMNL3Q8IVF7 1028 aa16.76■□□□□ 0.27
C9orf47-201ENST00000334490 AGLP35573 1532 aa16.76■□□□□ 0.27
C9orf47-201ENST00000334490 SYNRGQ9UMZ2 1314 aa16.76■□□□□ 0.27
C9orf47-201ENST00000334490 USP14P54578 494 aa16.76■□□□□ 0.27
C9orf47-201ENST00000334490 PLCB3Q01970 1234 aa16.76■□□□□ 0.27
C9orf47-201ENST00000334490 SERTAD1Q9UHV2 236 aa16.76■□□□□ 0.27
C9orf47-201ENST00000334490 CDHR2Q9BYE9 1310 aa16.76■□□□□ 0.27
C9orf47-201ENST00000334490 FOSP01100 380 aaPredicted RBP16.76■□□□□ 0.27
C9orf47-201ENST00000334490 ARMC9Q7Z3E5 817 aa16.76■□□□□ 0.27
C9orf47-201ENST00000334490 CD209Q9NNX6 404 aa16.76■□□□□ 0.27
C9orf47-201ENST00000334490 ADAMTS13Q76LX8 1427 aa16.75■□□□□ 0.27
C9orf47-201ENST00000334490 POTEB2H3BUK9 544 aa16.75■□□□□ 0.27
C9orf47-201ENST00000334490 PRDX5P30044 214 aa16.75■□□□□ 0.27
C9orf47-201ENST00000334490 SLC16A2P36021 539 aa16.75■□□□□ 0.27
C9orf47-201ENST00000334490 TRPC6Q9Y210 931 aa16.75■□□□□ 0.27
C9orf47-201ENST00000334490 SPATA31A1Q5TZJ5 1347 aa16.75■□□□□ 0.27
C9orf47-201ENST00000334490 PPRC1Q5VV67 1664 aaKnown RBP16.75■□□□□ 0.27
C9orf47-201ENST00000334490 OR52Z1P0C646 297 aa16.75■□□□□ 0.27
C9orf47-201ENST00000334490 CKAP4Q07065 602 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms