RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 DHX8Q14562 1220 aaKnown RBP13.41□□□□□ -0.26
HDAC6-201ENST00000334136 RASA3Q14644 834 aa13.41□□□□□ -0.26
HDAC6-201ENST00000334136 CDC42EP5Q6NZY7 148 aa13.41□□□□□ -0.26
HDAC6-201ENST00000334136 GOPCQ9HD26 462 aa13.41□□□□□ -0.26
HDAC6-201ENST00000334136 NAPAP54920 295 aa13.4□□□□□ -0.26
HDAC6-201ENST00000334136 ADCK5Q3MIX3 580 aa13.4□□□□□ -0.26
HDAC6-201ENST00000334136 LRRC47Q8N1G4 583 aaKnown RBP13.4□□□□□ -0.26
HDAC6-201ENST00000334136 PNMA1Q8ND90 353 aa13.4□□□□□ -0.26
HDAC6-201ENST00000334136 GTF3C6Q969F1 213 aa13.4□□□□□ -0.26
HDAC6-201ENST00000334136 FAM205AQ6ZU69 1335 aa13.4□□□□□ -0.26
HDAC6-201ENST00000334136 FAM196BA6NMK8 535 aa13.4□□□□□ -0.26
HDAC6-201ENST00000334136 SLU7O95391 586 aaKnown RBP13.4□□□□□ -0.26
HDAC6-201ENST00000334136 CASQ1P31415 396 aa13.4□□□□□ -0.26
HDAC6-201ENST00000334136 IREB2P48200 963 aaKnown RBP13.4□□□□□ -0.26
HDAC6-201ENST00000334136 ZNF654Q8IZM8 581 aa13.4□□□□□ -0.26
HDAC6-201ENST00000334136 CCDC148Q8NFR7 591 aa13.4□□□□□ -0.26
HDAC6-201ENST00000334136 NCOA5Q9HCD5 579 aaKnown RBP13.4□□□□□ -0.26
HDAC6-201ENST00000334136 ZNF70Q9UC06 446 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-201ENST00000334136 NECTIN1Q15223 517 aa13.4□□□□□ -0.26
HDAC6-201ENST00000334136 KANSL2Q9H9L4 492 aa13.4□□□□□ -0.26
HDAC6-201ENST00000334136 C4BP0C0L5 1744 aa13.4□□□□□ -0.26
HDAC6-201ENST00000334136 GPR75-ASB3A0A0A6YYF3 556 aa13.39□□□□□ -0.27
HDAC6-201ENST00000334136 LRMPQ12912 555 aa13.39□□□□□ -0.27
HDAC6-201ENST00000334136 ANGEL2Q5VTE6 544 aaKnown RBP13.39□□□□□ -0.27
HDAC6-201ENST00000334136 C15orf52Q6ZUT6 534 aaKnown RBP13.39□□□□□ -0.27
HDAC6-201ENST00000334136 ILDR2Q71H61 639 aa13.39□□□□□ -0.27
HDAC6-201ENST00000334136 ZSWIM6Q9HCJ5 1215 aa13.39□□□□□ -0.27
HDAC6-201ENST00000334136 KCNQ5Q9NR82 932 aa13.39□□□□□ -0.27
HDAC6-201ENST00000334136 ECM2O94769 699 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-201ENST00000334136 ALX1Q15699 326 aa13.39□□□□□ -0.27
HDAC6-201ENST00000334136 JAKMIP3Q5VZ66 844 aa13.39□□□□□ -0.27
HDAC6-201ENST00000334136 SYT10Q6XYQ8 523 aa13.39□□□□□ -0.27
HDAC6-201ENST00000334136 EHMT1Q9H9B1 1298 aa13.39□□□□□ -0.27
HDAC6-201ENST00000334136 RNF216Q9NWF9 866 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-201ENST00000334136 GGA3Q9NZ52 723 aa13.39□□□□□ -0.27
HDAC6-201ENST00000334136 TXLNAP40222 546 aa13.39□□□□□ -0.27
HDAC6-201ENST00000334136 CDK5RAP3Q96JB5 506 aa13.39□□□□□ -0.27
HDAC6-201ENST00000334136 AFDNP55196 1824 aaKnown RBP13.39□□□□□ -0.27
HDAC6-201ENST00000334136 PTPDC1A2A3K4 754 aa13.39□□□□□ -0.27
HDAC6-201ENST00000334136 IRX3P78415 501 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-201ENST00000334136 PPP2R5BQ15173 497 aa13.39□□□□□ -0.27
HDAC6-201ENST00000334136 PRMT6Q96LA8 375 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-201ENST00000334136 ZSWIM5Q9P217 1185 aa13.39□□□□□ -0.27
HDAC6-201ENST00000334136 CTR9Q6PD62 1173 aa13.38□□□□□ -0.27
HDAC6-201ENST00000334136 SLC44A5Q8NCS7 719 aa13.38□□□□□ -0.27
HDAC6-201ENST00000334136 GPBP1L1Q9HC44 474 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-201ENST00000334136 OGFRQ9NZT2 677 aa13.38□□□□□ -0.27
HDAC6-201ENST00000334136 V9GY48 417 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-201ENST00000334136 CAVIN2O95810 425 aa13.38□□□□□ -0.27
HDAC6-201ENST00000334136 ASNSP08243 561 aa13.38□□□□□ -0.27
HDAC6-201ENST00000334136 MCM6Q14566 821 aa13.38□□□□□ -0.27
HDAC6-201ENST00000334136 DACT2Q5SW24 774 aa13.38□□□□□ -0.27
HDAC6-201ENST00000334136 CPXCR1Q8N123 301 aa13.38□□□□□ -0.27
HDAC6-201ENST00000334136 CNNM3Q8NE01 707 aa13.38□□□□□ -0.27
HDAC6-201ENST00000334136 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.38□□□□□ -0.27
HDAC6-201ENST00000334136 SLFN13Q68D06 897 aa13.38□□□□□ -0.27
HDAC6-201ENST00000334136 CHURC1Q8WUH1 139 aa13.38□□□□□ -0.27
HDAC6-201ENST00000334136 DACH1Q9UI36 760 aa13.38□□□□□ -0.27
HDAC6-201ENST00000334136 RIC1Q4ADV7 1423 aa13.38□□□□□ -0.27
HDAC6-201ENST00000334136 PNMA8AQ86V59 439 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-201ENST00000334136 C2orf69Q8N8R5 385 aa13.37□□□□□ -0.27
HDAC6-201ENST00000334136 SLC10A4Q96EP9 437 aa13.37□□□□□ -0.27
HDAC6-201ENST00000334136 ZNF341Q9BYN7 854 aa13.37□□□□□ -0.27
HDAC6-201ENST00000334136 OSBPL5Q9H0X9 879 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-201ENST00000334136 CENPHQ9H3R5 247 aa13.37□□□□□ -0.27
HDAC6-201ENST00000334136 SCAF8Q9UPN6 1271 aaKnown RBP13.37□□□□□ -0.27
HDAC6-201ENST00000334136 ENTPD3O75355 529 aa13.37□□□□□ -0.27
HDAC6-201ENST00000334136 GH2P01242 217 aa13.37□□□□□ -0.27
HDAC6-201ENST00000334136 PPP4CP60510 307 aa13.37□□□□□ -0.27
HDAC6-201ENST00000334136 WRNIP1Q96S55 665 aa13.37□□□□□ -0.27
HDAC6-201ENST00000334136 C6orf50Q9HD87 102 aa13.37□□□□□ -0.27
HDAC6-201ENST00000334136 KLRG2A4D1S0 409 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-201ENST00000334136 TTLL1O95922 423 aa13.37□□□□□ -0.27
HDAC6-201ENST00000334136 MARCKSP29966 332 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-201ENST00000334136 UBASH3AP57075 661 aa13.37□□□□□ -0.27
HDAC6-201ENST00000334136 GADL1Q6ZQY3 521 aa13.37□□□□□ -0.27
HDAC6-201ENST00000334136 ZNF397Q8NF99 534 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-201ENST00000334136 SMARCC2Q8TAQ2 1214 aa13.37□□□□□ -0.27
HDAC6-201ENST00000334136 ZSCAN16Q9H4T2 348 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-201ENST00000334136 CBX8Q9HC52 389 aa13.37□□□□□ -0.27
HDAC6-201ENST00000334136 IBSPP21815 317 aaPredicted RBP13.36□□□□□ -0.27
HDAC6-201ENST00000334136 CALML3P27482 149 aa13.36□□□□□ -0.27
HDAC6-201ENST00000334136 SMCR8Q8TEV9 937 aaPredicted RBP13.36□□□□□ -0.27
HDAC6-201ENST00000334136 FAM151AQ8WW52 585 aa13.36□□□□□ -0.27
HDAC6-201ENST00000334136 ZDHHC15Q96MV8 337 aa13.36□□□□□ -0.27
HDAC6-201ENST00000334136 ABT1Q9ULW3 272 aaKnown RBP13.36□□□□□ -0.27
HDAC6-201ENST00000334136 FLT1P17948 1338 aa13.36□□□□□ -0.27
HDAC6-201ENST00000334136 PDS5AQ29RF7 1337 aaKnown RBP13.36□□□□□ -0.27
HDAC6-201ENST00000334136 SALL3Q9BXA9 1300 aa13.36□□□□□ -0.27
HDAC6-201ENST00000334136 KIF5CO60282 957 aa13.36□□□□□ -0.27
HDAC6-201ENST00000334136 GPC2Q8N158 579 aa13.36□□□□□ -0.27
HDAC6-201ENST00000334136 INCENPQ9NQS7 918 aa13.36□□□□□ -0.27
HDAC6-201ENST00000334136 ADARB2Q9NS39 739 aaKnown RBP13.36□□□□□ -0.27
HDAC6-201ENST00000334136 IFNKQ9P0W0 207 aa13.36□□□□□ -0.27
HDAC6-201ENST00000334136 CEP131Q9UPN4 1083 aa13.36□□□□□ -0.27
HDAC6-201ENST00000334136 ZBED4O75132 1171 aa13.36□□□□□ -0.27
HDAC6-201ENST00000334136 C12orf60Q5U649 245 aa13.36□□□□□ -0.27
HDAC6-201ENST00000334136 SPICE1Q8N0Z3 855 aa13.36□□□□□ -0.27
HDAC6-201ENST00000334136 KIFC2Q96AC6 838 aa13.36□□□□□ -0.27
HDAC6-201ENST00000334136 CEP89Q96ST8 783 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms